cluster # 1500

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Oryza sativa
cluster # 1500 cluster # 1500 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1500#0 length = 443 sequences # 2

consensusID : consensus_1500#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 443
fasta sequence

                              [GAGGCTCCCCTCCGCCACCGGCGACAGCG--ACGGCGGCGGCGAGCTCCGCCTCTGCTCCCACGTGCGGTGCGCCGGAGGGAGACCCCCGCCACGAGTTCC-GGCGGTGCTCC-GTCTGCGGCGCGGCC-AACTACTGCTCCC-GCGC-GTGCCAGGCGCTGGACTGGAAGCGCGCGCACAAGGCGCAGTGCGTGCCCATGGACCGGTGGCTCCTCGCCGCCGGCGAGGCCCGGTGACTCGCC-CC-CCGCCAACTACTCCCTTAGAC--CATCGGTCCACCGGTTTAACGCTGGACCGGGTGTAGCCAAGGCAAGTGGCAGAGAGAAAAAATTGAGGAAGCTTTTTTTTTTCTTTTTTACCGTTTC-CATC-GATGTCGTCTTGTCAGATGTACGTATTCCACTAGGGAAGAAGAGGGTAGAGATGCTACGGATGCTTTTTACTCGCATTAAAAA]

[+] EMBL BI813284             [GAGGCTCCCCTCCGCCACCGGCGACAGCG  ACGGCGGCGGCGAGCTCCGCCTCTGCTCCCACGTGCGGTGCGCCGGAGGGAGACCCCCGCCACGAGTTCC GGCGGTGCTCC GTCTGCGGCGCGGCC AACTACTGCTCCC GCGC GTGCCAGGCGCTGGACTGGAAGCGCGCGCACAAGGCGCAGTGCGTGCCCATGGACCGGTGGCTCCTCGCCGCCGGCGAGGCCCGGTGACTCGCC CC CCGCCAACTACTCCCTTAGAC  CATCGGTCCACCGGTTTAACGCTGGACCGGGTGTAGCCAAGGCAAGTGGCAGAGAGAAAAAATTGAGGAAGCTTTTTTTTTTCTTTTTTACCGTTTC CATC GATGTCGTCTTGTCAGATGTACGTATTCCACTAGGGAAGAAGAGGGTAGAGATGCTACGGATGCTTTTTACTCGCATTAAAAA]
[+] EMBL BI811454             [                     CGACAACGGAACGGC GC GCGAGCTCCGCCTCTGCTCCCACGT CGGT CGCCGGAGGGAGACCCCCCCCACGAGTTCCAGGCGGTGCTCCAGTCTGCGGCGCGGCCAAACTACTGCTCCCAGCGCAGTGCCAGGCGCTGGACTGGAAGCGCGCGCACAAGGC CAGTGCGTGCCCATGGACCGGTGGCTCCTCGCCGCCGGCGAGGCCCAGTGACTCGCCGCCGCCGCCAACTACTCCCTTAGACCACATCGGTCCACCGGTTTAACGCTGGACCGGGTGTAGCCAAGGCAAGTGGCAGAGAGAAAAAATTGAGGAAGCTTTTTTTTTTCTTTTTTACCGTTTCACATCAGATGTCGTCTTGTCAGATGTACGTATTCCACTAGGGAAGAAGAGGGTAGAGATGCTACGGATGCTTTTTAC            ]




>consensus_1500#0
GAGGCTCCCCTCCGCCACCGGCGACAGCGACGGCGGCGGCGAGCTCCGCCTCTGCTCCCA
CGTGCGGTGCGCCGGAGGGAGACCCCCGCCACGAGTTCCGGCGGTGCTCCGTCTGCGGCG
CGGCCAACTACTGCTCCCGCGCGTGCCAGGCGCTGGACTGGAAGCGCGCGCACAAGGCGC
AGTGCGTGCCCATGGACCGGTGGCTCCTCGCCGCCGGCGAGGCCCGGTGACTCGCCCCCC
GCCAACTACTCCCTTAGACCATCGGTCCACCGGTTTAACGCTGGACCGGGTGTAGCCAAG
GCAAGTGGCAGAGAGAAAAAATTGAGGAAGCTTTTTTTTTTCTTTTTTACCGTTTCCATC
GATGTCGTCTTGTCAGATGTACGTATTCCACTAGGGAAGAAGAGGGTAGAGATGCTACGG
ATGCTTTTTACTCGCATTAAAAA

clustalw multiple alignements is not computed in this case