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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15015#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 793 fasta sequence
[ATATTCAGAGTTTCAGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCGC-AG-CT-CCGTCGTCGACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTCGGCGTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTGCGTCGCGCTCAACGCCGACACGG-GG--CGCTCGGCCTCAGCATCAACCGCACCCGCGCGCTCGGCCTCCCCGACGCCTGC-AAGGTCC-AGACG-CC-GCC-GG-TCAGCA-ACTGCAAGAG-TGGCGCTGCTGCTCCTCCTGC-GGGACAGACGCCGACGACTCCGG-CGGGG-A-CAGGG-TCGAAGGCGACGCCGGCG-ACGCCCGTGGGCTCCGG-CG-TCGCGCCGCTCCGTGTC-TCGCCGGTGGGGATCCTCGCCGGCATCG-TCG-TCGCCGCCGTCTACGCCGTCT-CCG-CCGTGTGAGC-TCGACGTCGACGACGAACCCGGCAAGCCTA-TCACCGTCTGTAT-CAATCTTGAT-CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA-TTCG-TTAC-GGATTTGAGCT-GTTCTTCCT-CCATT-GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AK073569 [ATATTCAGAGTTTCAGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCGC AGCCG CCGTCGTCGACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTCGGCGTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTGCGTCGCGCTCAACGCCGACACGGCGG CGCTCGGCCTCAGCATCAACCGCACCCGCGCGCTCGGCCTCCCCGACGCCTGC AAGGTCC AGACG CC GCC GG TCAGCA ACTGCAAGAG TGGCGCTGCTGCTCCTCCTGC GGGACAGACGCCGACGACTCCGG CGGGG A CAGGG TCGAAGGCGACGCCGGCG ACGCCCGTGGGCTCCGG CG TCGCGCCGCTCCGTGTC TCGCCGGTGGGGATCCTCGCCGGCATCG TCG TCGCCGCCGTCTACGCCGTCT CCG CCGTGTGAGC TCGACGTCGACGACGAACCCGGCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AK104966 [ TATTCAGAGTTTCAGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCGC AGCCG CCGTCGTCGACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTCGGCGTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTGCGTCGCGCTCAACGCCGACACGGCGG CGCTCGGCCTCAGCATCAACCGCACCCGCGCGCTCGGCCTCCCCGACGCCTGC AAGGTCC AGACG CC GCC GG TCAGCA ACTGCAAGAG TGGCGCTGCTGCTCCTCCTGC GGGACAGACGCCGACGACTCCGG CGGGG A CAGGG TCGAAGGCGACGCCGGCG ACGCCCGTGGGCTCCGG CG TCGCGCCGCTCCGTGTC TCGCCGGTGGGGATCCTCGCCGGCATCG TCG TCGCCGCCGTCTACGCCGTCT CCG CCGTGTGAGC TCGACGTCGACGACGAACCCGGCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU184653 [ TTCAGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGTGGGCGCGGCGGCGC AGCCG CCGTCGTCGACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTCGGCGTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTGCGTCGCGCTCAACGCCGACACGGngg ]
[+] EMBL OSS15872A [ TCAGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTNTCCAGAATGGCAGCGAGGGTGGCGTGGNTCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGC N AG CT CGGTTCTGNACAAGCGGGTNCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACNANACGGCGCCGTCGG GTCGTGCTGCGGCAAGCTGGGCNAGGTGGTGAAGTCG ]
[+] EMBL AU102033 [ AGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCGCAAC CTNCTGGTNTNTACAATCNGGTGCACGCAGACGCTNCTGAGCATGTCGCCGTGCC ]
[+] EMBL AU108912 [ AGACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCGC AG CT NCG NTNCGACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTCGGC TCGTGCTGCGGCAA CTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTGCGTCGCGCTCAACGCCGACACGG GG CGCTCGGCCTCAGCATCAACCGCACCCGCGCGCTCGGCCTCCCCGACGCCTGC AA GTCC AGACG CC GCC GG TCAGCA ]
[+] EMBL AU108887 [ GACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCG AG CT CNGTTNT GACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACNANACGGCGCCGTCGG GTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCANCCGGAGTGCCTGTGCNTCGCGCTCAACGCCGACACGG GGGCCGCTCGGCCTC ]
[+] EMBL AU162596 [ ACACCAAGAGCATCTTGTACCACCTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCGC AG NT NCGT NCGACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTCGGCGTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTGCGTCGCGCTCAACGCCGACACGGcgg ]
[+] EMBL AU197508 [ CTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCG AG CT CGTTCG GACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCG CGTGCCTCAACTACCTGACCGGGAACGAGACGGCGCCGTC GCGTCGTGCTGCGGCAAGTTGGGCGAGGTGGTGAAGTCGNAG CGGAGTGCCTGTGCGTCG GCTCAACGCCGACACGG GG CGCTCGGCCTCAGAATCAACCG AACCG GNGGTCGGCCTCCCCGACG CTG AAAGTCC AGAC ]
[+] EMBL AU097589 [ CTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTCAGTGTCCAGAATGGCAGCGAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCG AG CT CGTTCGT ACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGGAACGAGACGGCGNCGTCGG GTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGNCGGAGTGCCTGTGCGTCG GCTCAACGNCGACACGG GG CGCTCGGCCTCAGCATCAACCGGAC ]
[+] EMBL AU161791 [ CTACGCAGAGTTTTGTTTGCTTGCTTGTTTGCTTGTAAGTGTCCAGAATGGCAGCNAGGGTGGCGTGGATCGGCGCGGCGGCGGCGGTGGTGGTGGTGGCGCTGATGGCCGGTGGCGCGGCGGCG AG CT CNNNTNNAACAAGCGGGTGCACGCAGACGCTGCTGAGCATGTCGCCGTGCCTCAACTACCTGACCGGNAACNAAACGGCGCCGTCGG GTCGTGCTGCGGCAAGCTGGGCGAGGTGGTGAAGTCGCAGCCGGAGTGCCTGTCCNTCGCGCTCAACGNCGACACGG GG CGCTCGGNCTCAGCATCA ]
[+] EMBL BM419731 [ ctctGACGCCTGC AAGGTCCAAGACN CC GCCTGG TCAGCANACTGCAAGAG TGGCGCTGCTGCTCCTCCTGC GGGACAGACNCCGACGACTCCGG CGGGG A CAGGT TCGAAGGCGACNCCGGCN ACGCCCGTGGGCTCCGG CGTTCGC CCGCTCCGTGTCTTCGCCGGTGGGGATCCTCGCCGGCATCGTTCGTTCGCCGCCGTCTACGCCGTCT CCGCCCGTGTGAGCTTCGACGTCGACGACGAACCCGGCAAGCCTATTCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGT CCACGATCAGAGGAGCTTGT]
[+] EMBL AU161792 [ GCCTTCAAAGGTCC AGACGNCCTGCC GGTTCAGCA ACTGCAAGAGTTGGCGCTGCTGCTCCT CTGC GGGACAGACGCCGACGACTCCGG CGGGG ANCAGGG TCGAAGGCGACGCC GCG ACGCCCGTGGGCTCCGG CG T GCGCCGCTCCGTGTC TCGCCGGTGGGGATCCTCGCCGGCATCG TCG TCGCCG CNTCTACGCCGTCT CCG CCGTGTGAGC TCGACGTCGACGACGAACCCGGCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU161744 [ AGCA ACTTCAAGAG TTGCGCTGCTGCTCCT CTGCGGGGACAGACGCCGACGACTCCGGNCGGGG A CAGGG TCGAAGGCGACGCCGGCGTACGCCCGTGGGCTCCGG CG T GCGCCGCTCCGTGTC TCGCCGGTGGGGATCCTCGCCGGCATCG TCG TCGCCGCCGTCTACGCCGTCT CCG CCGTGTGAGC TCGACGTCGACGACGAACCCGGCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU174093 [ GACGCCGACGACTCCGG CGGGG A CAGGG TCGAAGGCGACGCCGGCG ACGCCCGTGGGCTCCGG CG TCGCGCCGCTCCGTGTC TCGCCGGTGGGGATCCTCGCCGGCATCG TCG TCGCCGCCGTCTACGCCGTCT CCG CCGTGTGAGC TCGACGTCGACGACGAACCCGGCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAATTTCGTTTACGGGATTTGAGCTGGTTCTTCCTCCCATTGGGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU097590 [ gaccanntACGCCGACGACTCCGG CGGGGAA CAGGGTTCTTAAGCGACGCC GCGTACGCCCGTGGGCTCCGGCCG TCGCGCCGCTCCGTGTC TCGCCGGTGGGGATCCTCGCCGGCATCG TCG TCGCCGCCGTCTACGCCGTCT CCG CCGTGTGAGC TCGACGTCGACGACGAACCCGGCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU102034 [ cgGCCGTCTNCCG CCGTGTGAGC TCGACGTCGACGACGAACCC GCAAGCCTA TCACCGTCTGTAT CAATCTTGAT CGGTGCACGCATTTGAGGATTTCGATGTGATGTGAGCATGGCACGCGTGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU108886 [ nCGCCGAACCCGGCAAGCCTA NCACCGTCTGTATCCAATCTTGATCCGGTGCACGCATTTGAGGATTTNGATGTGATGTGAGCATGGCACGCGNGCGTGTAGGAA TTCG TTAC GGATTTGAGCT GTTCTTCCT CNATT GGTTTATGCTACTGCTGCTCCNATTTGTGCCACGATCAGAGGAGCTTGT]
[+] EMBL AU070920 [ CATTTGAGGATTTCGATGTGATGTGAGCNTGGCACGCGTGCGTGTAGGAA TTCG TTNC GGATTTGAGCT GTTCTTCCT CCATT GGTTTATGCTACTGCTGCTCCCATTTGTGCCNCGATCAGAGGAGCTTGT]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||