These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15035#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2848 fasta sequence [GTCCTCGTCGTCTTCCTCCCATTTTTTTTTCCTCCTCCTCCTCCTCTCATCCCTCGCCGCGAGCCAAAGCCCCTGGTTTCCTCGCAACTGCCTCCCCGCGATTCCGTTTGACCCCCACTGTTCTTCTCCCCTACCACCACCAGGTCGCAGTCGCTTCCAATTTCCAAATAATTCCCTCCACTCCGGCCGCTCGCGAGGAAAGAAAAGGATTTCTTTTTCTCTCTCTCTCTCTCTCCCTCTCTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGGGAGGCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATTGGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGCCATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGGCGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGTCGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGGCAGGGGCGGTGGCGGCGCAGGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAGGAGGAGG-AGGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC-GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT-GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG-TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT-TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCACAATTGACTGCTGATGGCCAGAGTGCAATGAGTATCTGCCGGAGGTTAACAAGGATGAAAGACTACAATACAAAGATGGAGCAAGGCCAAGAGTCAAACAAAGACAGATTATGTATTGATATATTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAGATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAAACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG-TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG-CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT-TCTGTTTTGTTCAGGATGGCTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCATTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAA-AGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGT-TTTTTTTTGGCTGTGAGACACA-GGAAATGGATATGCAAAAAAGAAAAATCTTGTGTAAATAAAAGG] [+] EMBL AK067198 [GTCCTCGTCGTCTTCCTCCCATTTTTTTTTCCTCCTCCTCCTCCTCTCATCCCTCGCCGCGAGCCAAAGCCCCTGGTTTCCTCGCAACTGCCTCCCCGCGATTCCGTTTGACCCCCACTGTTCTTCTCCCCTACCACCACCAGGTCGCAGTCGCTTCCAATTTCCAAATAATTCCCTCCACTCCGGCCGCTCGCGAGGAAAGAAAAGGATTTCTTTTTCTCTCTCTCTCTCTCTCCCTCTCTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGGGAGGCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATTGGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGCCATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGGCGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGTCGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGGCAGGGGCGGTGGCGGCGCAGGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAGGAGGAGG AGGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCACAATTGACTGCTGATGGCCAGAGTGCAATGAGTATCTGCCGGAGGTTAACAAGGATGAAAGACTACAATACAAAGATGGAGCAAGGCCAAGAGTCAAACAAAGACAGATTATGTATTGATATATTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAGATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAAACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCATCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGCAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTATAATGATAAAATCTTTT ] [+] EMBL CB639247 [ TCTCCCCCTCTCTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGGGA GCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATTGGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGCCATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGGCGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGTCGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGGCAGGGGCGGTGGCGGCGCAAGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAGG ] [+] EMBL CB635292 [ GGAGGCACGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGCACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGAGCGACGCCTTCCTGTCTCTGCTGGGTTACCTGTACTCGGGCAGGCTCCGGCCGGAGCCGGATGACGCGGTGTCCTGCGCCAACCCCATGTGCCCGCACGACTCGTGCCCTCCGGCGATCACGTTCAACGGCGAGCAAATGGACGCag ] [+] EMBL CB635872 [ GAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGACGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCTAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAACACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAA ] [+] EMBL CB652223 [ CGCCCAGTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCTAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGGAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGCTGGATAAGGAACTTCCTCCAGAAGTTGCTGATCAGATAAAAGAGATTCGCCAAAAATCTCAACCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGA ] [-] EMBL BI809237 [ GGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGACGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGG TTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTG TTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTG AAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAA TTCCTCCAGAAGTTG TGTTCAGATAAAAGAGA TCG CAAAAATCTCAG CAAATGAGGGTGACATTGTTCATTTCAGA CCTGTACTTGAG AAAGGGTC GAAGA ] [+] EMBL CB662984 [ AGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCANCATTGACT ] [+] EMBL CB662786 [ AGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCACAATT ] [+] EMBL CF325841 [ GCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGG ] [+] EMBL CF324017 [ ATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAATGGTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCTNTGGATGATGCCAATGCATTGCACTATGCT ] [+] EMBL CF323144 [ ATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGAT ] [+] EMBL CA764274 [ aaggggTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAGATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAAACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCGGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTCAGTAACAAATTTCCGCTCGTGATGNTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTANAAAGTGCTGNTCTGGGCTGCACTCAGCTGGNTTATGGGANCCATGCCGGGGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTNCNAAGTAGNGNCTCTCGNAAANATGGTTGTAGCAT TCTGNTTTGTT AAGATGGCTGGAATGA NAAANCTTTT AANANA ATATAGC ] [-] EMBL CB635873 [ GTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAAAAGCTTTTCAATAGATATATAGCTAATTGTCTCGTAAaaaaaaga ] [-] EMBL CB662985 [ GCATTTGCAAGATTATTTTCTCTTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCTCTCCAGAATTTGGCATTGTTCTTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGTTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTTTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCCACCTCCAAAATGGCACTTTTGATGAGCAAAATGTTAAAAGGATGCGGTTTTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTTTATCTTGTCATCTTCATCGTCATCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAAC AATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTCCAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTCCTGTTTTGGGCTGCACTCAGCTGGTTTATGGGACCCACG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGCAGTGTCTCTCGTGAATATGTTCGTAGCGTGTCTGTTT ] [-] EMBL CB633531 [ AATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCA TGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCATTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAAGGGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGTGTTTTTTTTGGCTGTGAGACCTT TGAAGTGGATATGCAAAAAA ] [-] EMBL CB635293 [ GTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCATTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAA AGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGTGTTTTTTTTGGCTGTGAGACACAGGGAGATGGATATGCAAAAAAGAAAAATCTTGTGTAAATAAAAGG] [+] EMBL BI810390 [ CCGGA GCACTCGACCTCC AAATGGCACTTCTGATGA CCAAATGTTAAAAGAAT C GTTCTGTGAGTTTAAAGGAGGATGTGCGCAA GCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAAC AATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATC ATAGACCTGTATAGTCTTACAGTGGTATAAC ATTAGATATCGAAGCTTCTTCGAATATTAGCAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGC AAAGAAAACCAGCTGATTAGAGGCTCC AAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAACATCTTTTCAATAGATAaaaaaaaa ] [-] EMBL CB639248 [ TGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAANAGCATGTTTTCTATCTTGTCATCTTCATCGTCATCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTTTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGCAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTATAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTTTCGTAAGCATACTGCCATTATTGAGATCGTAGAAGCTGCAAGTTTTGTAAGAAAA AGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGT TTTTTTTTGGTTGTGAGACACA GGTAATGGATAT ] consensusID : consensus_15035#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence [TCAAGATCATTGAGCTCATCTCGCTGTTCCACGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCAGTGCTTGAAAATGTATTCGGAGATTGCAAGATCAAATCTTGATATGTATCGTGATAGACTCTCAGAGTGCTGTCAGATAAGG] [+] EMBL D42201 [TCAAGATCATTGAGCTCATCTCGCTGTTCCACGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCAGTGCTTGAAAATGTATTCGGAGATTGCAAGATCAAATCTTGATATGTATCGTGATAGACTCTCAGAGTGCTGTCAGATAAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15035#0 GTCCTCGTCGTCTTCCTCCCATTTTTTTTTCCTCCTCCTCCTCCTCTCATCCCTCGCCGC 60 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GAGCCAAAGCCCCTGGTTTCCTCGCAACTGCCTCCCCGCGATTCCGTTTGACCCCCACTG 120 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TTCTTCTCCCCTACCACCACCAGGTCGCAGTCGCTTCCAATTTCCAAATAATTCCCTCCA 180 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CTCCGGCCGCTCGCGAGGAAAGAAAAGGATTTCTTTTTCTCTCTCTCTCTCTCTCCCTCT 240 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGG 300 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GAGGCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATT 360 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGC 420 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGG 480 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGT 540 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGG 600 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CAGGGGCGGTGGCGGCGCAGGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAG 660 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GAGGAGGAGGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCG 720 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACG 780 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TGGCCGACGGTGGCCCGCCCGTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCT 840 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCG 900 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGG 960 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 AGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGT 1020 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 ACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCC 1080 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGG 1140 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATA 1200 consensus_15035#1 ---TCAAGATCATTGAGCTCATCTCGCTGTTCCA-CGACGGCTTCTTAACTTCGTCGATA 56 ********* ******************** ************************* consensus_15035#0 AGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTC 1260 consensus_15035#1 AGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTC 116 ************************************************************ consensus_15035#0 CAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAATGTATCGTTGG 1320 consensus_15035#1 -AGTGCTTGAAAA-TGTATTCGGAGA-TTGCAAGATCAAATCTTGATA-TGTATCGT--G 170 ************ ************ ********************* ******** * consensus_15035#0 ATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGC 1380 consensus_15035#1 ATAGA------CTCTCAGAG--TGCTGT-CAGATAAGG---------------------- 199 *** * **** ****** ******* consensus_15035#0 CAAATGAGGGTGACACCGTCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCC 1440 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 ACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGA 1500 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TCACCTTGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTG 1560 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACA 1620 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACA 1680 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 AAGGAGCAGCTGTATCACAATTGACTGCTGATGGCCAGAGTGCAATGAGTATCTGCCGGA 1740 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GGTTAACAAGGATGAAAGACTACAATACAAAGATGGAGCAAGGCCAAGAGTCAAACAAAG 1800 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 ACAGATTATGTATTGATATATTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAG 1860 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 ATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAA 1920 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 ACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTG 1980 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAAT 2040 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGG 2100 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGG 2160 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAA 2220 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 ATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAGTTAAAGGAGGATG 2280 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTT 2340 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAAT 2400 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACA 2460 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 GTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTG 2520 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CACTCAGCTGGTTTATGGGACCCATGCGGTGAAACTGGCAAAAGAAAACCAGCTGATTAG 2580 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 AGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCATTCTGTTTTGTTCAGGATGG 2640 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCA 2700 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 TTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAAAGACGGCGTTGCTTATCGCCAA 2760 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 CGCTATGTATCGGAGAACAAGTTTTTTTTTGGCTGTGAGACACAGGAAATGGATATGCAA 2820 consensus_15035#1 ------------------------------------------------------------ consensus_15035#0 AAAAGAAAAATCTTGTGTAAATAAAAGG 2848 consensus_15035#1 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||