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Oryza sativa
cluster # 15059 cluster # 15059       Sequences # 19       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15059#0 length = 713 sequences # 2  
consensus_15059#1 length = 645 sequences # 16  
consensus_15059#2 length = 405 sequences # 1  

consensusID : consensus_15059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 713
fasta sequence
                              [TTTNTCACNCATCNCNCGAACACCCACNANNGATGACCCNAGTCNCACCCGNCGANAAGNTTAACCCAANCCACNANCGGCCTCCNGTTTNTTTGCNAGCTCNNTGCTCTTCCCCTCTCTTNNAACCTTNTNCTCNTNCTAACACATCCTCGTNTCGTCATCNCCATTGNCGNCGTCGACCAANGGCCTTGGNTCTCCTCTTCGCGGTGCTCTTCGCGCTCTTGCCGNCGACGGCGNNCCGTGANAGTTGCTGGAGGANNAGGCCNTNTGAGCTNGGNCGGCCTCGCGCCTGCTCTCCGCGCCGNCCCAACGCNGCGGCCGCCGTCGCCCCCGGGNTCNTTGNGCCTTGGCCGCGGTCNTCTCGCCCCTGGCCTNCCTCGCGCATTGAGATGAGATTCGACCCCTGNGAGGGCGCNGCGGGTCGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGT-GTACTGCCGATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU030627             [TTTNTCACNCATCNCNCGAACACCCACNANNGATGACCCNAGTCNCACCCGNCGANAAGNTTAACCCAANCCACNANCGGCCTCCNGTTTNTTTGCNAGCTCNNTGCTCTTCCCCTCTCTTNNAACCTTNTNCTCNTNCTAACACATCCTCGTNTCGTCATCNCCATTGNCGNCGTCGACCAANGGCCTTGGNTCTCCTCTTCGCGGTGCTCTTCGCGCTCTTGCCGNCGACGGCGNNCCGTGANAGTTGCTGGAGGANNAGGCCNTNTGAGCTNGGNCGGCCTCGCGCCTGCTCTCCGCGCCGNCCCAACGCNGCGGCCGCCGTCGCCCCCGGGNTCNTTGNGCCTTGGCCGCGGTCNTCTCGCCCCTGGCCTNCCTCGCGCATTGAGATGAGATTCGACCCCTGNGAGGGCGCNGCGGGTCGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGT GTACTGCCGATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAA                                                           ]
[-] EMBL AU183280             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tttttttTTATTTTANGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTAGTACTGCCGATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15059#0 TTTNTCACNCATCNCNCGAACACCCACNANNGATGACCCNAGTCNCACCCGNCGANAAGN TTAACCCAANCCACNANCGGCCTCCNGTTTNTTTGCNAGCTCNNTGCTCTTCCCCTCTCT TNNAACCTTNTNCTCNTNCTAACACATCCTCGTNTCGTCATCNCCATTGNCGNCGTCGAC CAANGGCCTTGGNTCTCCTCTTCGCGGTGCTCTTCGCGCTCTTGCCGNCGACGGCGNNCC GTGANAGTTGCTGGAGGANNAGGCCNTNTGAGCTNGGNCGGCCTCGCGCCTGCTCTCCGC GCCGNCCCAACGCNGCGGCCGCCGTCGCCCCCGGGNTCNTTGNGCCTTGGCCGCGGTCNT CTCGCCCCTGGCCTNCCTCGCGCATTGAGATGAGATTCGACCCCTGNGAGGGCGCNGCGG GTCGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTA GCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTG TTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCCGATCTCTCTTTTGCCTGTATAAG AGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_15059#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 645
fasta sequence
                              [GCAATTCCCACACTTGCACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG-G-GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC-TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC-GATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAA]

[+] EMBL AK058427             [GCAATTCCCACACTTGCACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTA                      ]
[+] EMBL AU183200             [            CTTGCACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCC                                                                                                                                                                                                              ]
[+] EMBL AU030626             [                CACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCNGGCCAACGCGGCGGGCGCCGTCGCGCCG GAGGGCGTGGGCCGTGGCCGCGGTCGTCTCGNTCCTTGGCCTTCCTCGCGCATTGAGA                                                                                                                                                                                                                                                                            ]
[+] EMBL CF325487             [                 ACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTGC TGGACTTGCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGG                                                                                                                                                                                                                                                      ]
[+] EMBL AU172988             [                 ACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGGGGgt                                                                                                                                                                                                       ]
[+] EMBL C26887               [                    CACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACANATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSS16385A            [                     ACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTAAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGNTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTNGCTCTCCTCTTCGng                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSC8661              [                      CACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTG TCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTAAGAGTACTGGAGGAGGAGGCCGTNGAGCTGGGCGGCCTC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C74334               [                                                         GGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCNCGCTGCTCTTCCCTCTCTTGATCGTGTCTNGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGNTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTTAGAGTNCTGGAGGAGGATGCCGTCGAGCTGGGCGGNCTCGCGCCTGCTCCCGCGCCGGCCAANGCGGCGGGCGCCGTCGCNCCGTG GGGCGT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU181555             [                                                                                                                                                                                                         GGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCCNGATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAA      ]
[+] EMBL AU183201             [                                                                                                                                                                                                            GCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTA     TTAAAAAAAAA   ]
[+] EMBL AU198254             [                                                                                                                                                                                                             CTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAA]
[+] EMBL AU182763             [                                                                                                                                                                                                                            GCGGCGACGGCGGCCGTGAGAGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCGGCGGGCGCCGTCGCGCCG G GGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCC TGGCCTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAANAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAA      ]
[+] EMBL AU031153             [                                                                                                                                                                                                                                                                                                                                                                CGCTCN TGGCCTTCCTCGCGCATTGNGATGAGATTCGACCCCTGAGAGGGCGCNNCGGGTNGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTAaaaa               ]
[+] EMBL AU030703             [                                                                                                                                                                                                                                                                                                                                                                               CTCGCGCATTGAGATGAGANTCGACCCCTGAGAGGGCGCAGCGGGTNGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTNCCGTTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTNTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAA   ]
[+] EMBL AU198161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           nGTGGTTTGGNTTTCCGTTGCANCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTNTAGTCCGTTATGGAGGTGTTGTGTACTGCC GATCTCTCTTTTGCCTGTATAANANAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAA]


>consensus_15059#1 GCAATTCCCACACTTGCACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGC GAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCT CTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAA GGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACGGCGGCCGTGAG AGTGCTGGAGGAGGAGGCCGTCGAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAA CGCGGCGGGCGCCGTCGCGCCGGGGGCGTGGGCCGTGGCCGCGGTCGTCTCGCTCCTGGC CTTCCTCGCGCATTGAGATGAGATTCGACCCCTGAGAGGGCGCAGCGGGTAGTTTGCGGA ATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCGTTGCAGCGGTAGCATTTGGTGTT TATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTATTTTAGGCGTGTTTGTTCTAGTC CGTTATGGAGGTGTTGTGTACTGCCGATCTCTCTTTTGCCTGTATAAGAGAGGAATATGG TTTTGAATAATACAATTCATTTACTATTCTTTTAAAAAAAAAAAA



consensusID : consensus_15059#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 405
fasta sequence
                              [TATAGTCCATCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACAGCGGCCGTCACATTGCTCGATGATGAAGCCGTCTAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCTGCGGCGCCGTTCCCGCCCGGGGCCTTGGCCGTTGGCCCCGGTTCCTCTTCCTCCTGGGCCTTCCTTCCCCATTGAAAATAGAATTCCACCCCCTCCAAAAGGCCCACCGGTTTTTTTTTTGCCCGAAATCTTTTTTGGAA]

[+] EMBL AA754097             [TATAGTCCATCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTGCAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCATCTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACAGCGGCCGTCACATTGCTCGATGATGAAGCCGTCTAGCTGGGCGGCCTCGCGCCTGCTCCCGCGCCGGCCAACGCTGCGGCGCCGTTCCCGCCCGGGGCCTTGGCCGTTGGCCCCGGTTCCTCTTCCTCCTGGGCCTTCCTTCCCCATTGAAAATAGAATTCCACCCCCTCCAAAAGGCCCACCGGTTTTTTTTTTGCCCGAAATCTTTTTTGGAA]


>consensus_15059#2 TATAGTCCATCGGCGCCCGGCGAGAAGCTTCAGCCAAGTCACAGCGGCCTCGGCTTCTTG CAGCTCGCTGCTCTTCCCTCTCTTGATCGTGTCTCGTGCCACACATCCTCGTTTCGTCAT CTCCATGGCGGCGTCGACCAAGGCCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGT GGCGGCGACAGCGGCCGTCACATTGCTCGATGATGAAGCCGTCTAGCTGGGCGGCCTCGC GCCTGCTCCCGCGCCGGCCAACGCTGCGGCGCCGTTCCCGCCCGGGGCCTTGGCCGTTGG CCCCGGTTCCTCTTCCTCCTGGGCCTTCCTTCCCCATTGAAAATAGAATTCCACCCCCTC CAAAAGGCCCACCGGTTTTTTTTTTGCCCGAAATCTTTTTTGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15059#0      ---TTTNTCACNCAT---CNCNCGAACACCCACNANNGAT-GACCCNAGTCNCACCCGNC 53
consensus_15059#1      GCAATTCCCACACTTGCACGCACACACGAACACCACAGAGAGAGTCCAGCGGCGCCCGGC 60
consensus_15059#2      ---------------------------------------TATAGTCCATCGGCGCCCGGC 21
                                                                 *  * *    * **** *

consensus_15059#0      GANAAGNTTAACCCAANCCACNANCGGCCTCCNGTTTNTTTGCNAGCTCNNTGCTCTTCC 113
consensus_15059#1      GAGAAGCTTCAGCCAAGTCACA-GCGGCCTC-GGCTTCTTG--CAGCTCGCTGCTCTTCC 116
consensus_15059#2      GAGAAGCTTCAGCCAAGTCACA-GCGGCCTC-GGCTTCTTG--CAGCTCGCTGCTCTTCC 77
                       ** *** ** * ****  ***   *******  * ** **    *****  *********

consensus_15059#0      CCTCTCTTNNAACCTTNTNCTCNTNCTAACACATCCTCGTNTCGTCATCNCCATTGNCGN 173
consensus_15059#1      ---CTCTCTTGATCGTGTC-TCGTGCCA-CACATCCTCGTTTCGTCATCTCCAT-GGCGG 170
consensus_15059#2      ---CTCTCTTGATCGTGTC-TCGTGCCA-CACATCCTCGTTTCGTCATCTCCAT-GGCGG 131
                          ****    * * * *  ** * * * *********** ******** **** * ** 

consensus_15059#0      CGTCGACCAANGGCCTTGGNTCTCCTCTTCGCGGTGCTCTTCGCGCTCTTGCCGNCGACG 233
consensus_15059#1      CGTCGACCAAGG-CCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACG 229
consensus_15059#2      CGTCGACCAAGG-CCTTGGCTCTCCTCTTCGCGGTGCTCGTCGCGCTCGTGGCGGCGACA 190
                       ********** * ****** ******************* ******** ** ** **** 

consensus_15059#0      GCGNNCCGTGANAGTTGCTGGAGGANNAGGCCNTNTGAGCTNGGNCGGCCTCGCGCCTGC 293
consensus_15059#1      GCGGCC-GTGAGAGT-GCTGGAGGAGGAGGCCGTC-GAGCTGGGC-GGCCTCGCGCCTGC 285
consensus_15059#2      GCGGCC-GTCACATT-GCTCGATGATGAAGCCGTC-TAGCTGGGC-GGCCTCGCGCCTGC 246
                       ***  * ** * * * *** ** **  * *** *   **** **  **************

consensus_15059#0      TCTCCGCGCCGNCCCAACGCNGCGGCCGCCGTCGCCCCCGGGNTCNTTGNGCCTTGGCCG 353
consensus_15059#1      TC-CCGCGCCGGCC-AACGCGGCGGGCGCCGTCGCGCCGGGGG--CGTGGGCCGTGGCCG 341
consensus_15059#2      TC-CCGCGCCGGCC-AACGCTGCGG-CGCCGTTCCCGCCCGGGGCCTTGGCCGTTGGCCC 303
                       ** ******** ** ***** **** ******  *  *  **     **  *  ***** 

consensus_15059#0      CGGT-CNTCTCGCCCCTGG-CCTNCCTCGCGCATTGAGATGAGA--TTCGACCCCTGNGA 409
consensus_15059#1      CGGT-CGTCTCGCTCCTGG-CCTTCCTCGCGCATTGAGATGAGA--TTCGACCCCTGAGA 397
consensus_15059#2      CGGTTCCTCTTCCTCCTGGGCCTTCCTTCCCCATTGAAAATAGAATTCCACCCCCTCCAA 363
                       **** * ***  * ***** *** ***  * ****** *  ***  * *  *****   *

consensus_15059#0      GGGCGCNGCGGGTCGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCG 469
consensus_15059#1      GGGCGCAGCGGGTAGTTTGCGGAATCTGTTGGGACGGGAATCCTGTGGTTTGGATTTCCG 457
consensus_15059#2      AAGGCCCACCGGTTTTTT----------TTTTGCCCGAAATCTTTT---TTGGAA----- 405
                         *  *  * ***  ***          **  * * * **** * *   *****      

consensus_15059#0      TTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTA 529
consensus_15059#1      TTGCAGCGGTAGCATTTGGTGTTTATCTGAGGAGATTATTGCTGTACGTTTCTATAGTTA 517
consensus_15059#2      ------------------------------------------------------------
                                                                                   

consensus_15059#0      TTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCCGATCTCTCTTTT 589
consensus_15059#1      TTTTAGGCGTGTTTGTTCTAGTCCGTTATGGAGGTGTTGTGTACTGCCGATCTCTCTTTT 577
consensus_15059#2      ------------------------------------------------------------
                                                                                   

consensus_15059#0      GCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAA 649
consensus_15059#1      GCCTGTATAAGAGAGGAATATGGTTTTGAATAATACAATTCATTTACTATTCTTTTAAAA 637
consensus_15059#2      ------------------------------------------------------------
                                                                                   

consensus_15059#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 709
consensus_15059#1      AAAAAAAA---------------------------------------------------- 645
consensus_15059#2      ------------------------------------------------------------
                                                                                   

consensus_15059#0      AAAA 713
consensus_15059#1      ----
consensus_15059#2      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)