These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2279 fasta sequence [CACCCCCCGCCTATGCACGCCCGCCGCGCGTGGCGCCGGGCGGCGGGGTGACGTGACGTCATCTCCTCGTCGGTCGGCGTCCCATGAGGCGGAGCGGCAACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGACGAGAGGGAGCTCTCCATCAGAGGCCTCGCCGCCTACCAGCCGTACGACGGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAACCATCTCAGGTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTTTCTGCCTTGCTGATCCAGGAAATGCATTTCTTGTTCCATCACCATACTACCCTGGGTGGGACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATAGCCTACAATCAGGCAAAGAAGCGAGGAATAAAGGTTCGTGGGGTTCTCATATCCAACCCAAATAACCCTACAGGAAGCTTTGTGCCCAAGCAAACACTGCATGATCTTCTAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGATGAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGGTTGTTGATGATCTAGAAGACTTTGACAAAGGCAGGGTGCACATAATATATGGACTCTCGAAAGACCTATCTCTTGCCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGACAGCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTTGCCATGCTCTCGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC-TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTG-CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTA-TTGGGGTTCATTTTTGTCA--AAAAAAAG-GTCACAAACAATGGAACAATCATGCATAGGAAAAAAAGAACATGTTGGTTACAGAATTCAGATGAAATGTATTGCA] [+] EMBL AK065212 [CACCCCCCGCCTATGCACGCCCGCCGCGCGTGGCGCCGGGCGGCGGGGTGACGTGACGTCATCTCCTCGTCGGTCGGCGTCCCATGAGGCGGAGCGGCAACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGACGAGAGGGAGCTCTCCATCAGAGGCCTCGCCGCCTACCAGCCGTACGACGGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAACCATCTCAGGTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTTTCTGCCTTGCTGATCCAGGAAATGCATTTCTTGTTCCATCACCATACTACCCTGGGTGGGACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATAGCCTACAATCAGGCAAAGAAGCGAGGAATAAAGGTTCGTGGGGTTCTCATATCCAACCCAAATAACCCTACAGGAAGCTTTGTGCCCAAGCAAACACTGCATGATCTTCTAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGATGAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGGTTGTTGATGATCTAGAAGACTTTGACAAAGGCAGGGTGCACATAATATATGGACTCTCGAAAGACCTATCTCTTGCCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGACAGCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTTGCCATGCTCTCGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCC TCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAA ] [+] EMBL CB633124 [CACCCCCCGCCTATGCACGCCCTCCGCGCGTGGCGCCTGGCGGCGGGGTGACGTGACGTCATCTCCTCGTCGGTCGGCGTCCCATGAGGCGGAGCGGCGACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGCCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGTGGACGCGGCGTCCA ] [+] EMBL CB671006 [ CCCCGCCTATGCACGCCCGCCGCGCGTGGCGCCGGGCGGCGGGGTGACGTGACGTCATCTCCTCGTCGGTCGGCGTCCCATGAGGCGGAGCGGCAACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCTGACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGACGAGAGGGAGCTCTCCATCAGAGGCCTCGCCGCCTACCAGCCGTACGACGGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTG ACCA ] [+] EMBL CB617978 [ CGGGGTGACGTGACGTCATCTCCTCGTCGGTCGGCGTCCCATGAGGCGGAGCGGCGACGGCGGCGCGGCGAAGAATAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACATCTAGCGCAACCGCGCCTCGCCGCCGCCGCCGTCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCTCCGATCCACCGCTCGCTCTCTCGCGGTCTCCTCGCCCCTCGCGCCGCGCTCTCGGGCATCTCCGCGCGCGGCGTCTCCGTCCGCGATGACTACTCGCTCTACTACGTCGGCCTCCGCCTCTGCGCCGCCGACTCCTACCACCCGGCCTCCAACCCCTCCGGCATCATCCAACTCGGCCTCTTCTAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCTCGCGGAGG ] [+] EMBL CB670677 [ GCGTCCCATGAGGCGGAGCGGCAACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCGGCTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCGTCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGATGACGAGAGGGAGCTCTCCATCAGAGGCCTCTCCGCCTACCGGCCGTACGACGGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGACGCAAATCATGCAATGATCTGTGTCCT ] [+] EMBL CB682408 [ AACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGGTGCGCCGCCGACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGGTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGACGAGAGGGAGCTCTCCGTCAGAGGCCTCGCCGCCTACCAGCCGCACGACGGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAACCATCTCACGTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTTTCTGCCTTGCTGATCCACGAAATGCATTTCTTGTTCCATCACCATACTACCCTGAGTGGGACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATAGCCTACAATCACGCAAAGAAGCGAGGAATAAAGGCTCGTGGGGTTCTCATATCCAACCCATATAACCCTACAG ] [+] EMBL CB669266 [ GCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCACGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGACGAGAGGGAGCTCTCCATCAGAGGCCTCGCCGCCTACCAGCCGTACGACAGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAACCATCTCAGGTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTCTCTGCCTTGCTGATCCACGAAATGCATTTCTTGTTCCATCACCATACTACCCTGGGTGGGACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTATCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATATGCTACAATCAGGCAAAGAAGCGAGGAATAAAGGTTCGTGGGGTTCTCATATCCAACCC ] [+] EMBL CB674317 [ ATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAACCATCTCAGGTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTTTCTGCCTTGCTGATCCAGGAAATGCATTTCTTGTTCCATCACCATACTACCCTGGGTGGGACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATAGCCTACAATCAGGCAAAGAAGCGAGGAATAAAGGTTCGTGGGGTTCTCATATCCAACCCAAATAACCCTACAGGAAGCTTTGTGCCCAAGCAAACACTGCATGATCTTCTAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGATGAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGGTTGTTGATGATCTAGAAGACTTTGACAAAGGCAGGGTGCACATAATATATGGACTCTCGAAAGACCTATCTCTTGCCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGACAGCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTTGCCATGCTCTCGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCT ] [+] EMBL CB657888 [ ACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATAGCCTACAATCAGGCAAAGAAGCGAGGAATAAAGGTTCGTGGGGTTCTCATATCCAACCCAAATAACCCTACAGGAAGCTTTGTGCCCAAGCAAACACTGCATGATCTTCTAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGATGAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGGTTGTTGATGATCTAGAAGACTTTGACAAAGGCAGGGTGCACATAATATATGGACTCTCGAAAGACCTATCTCTTGCCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGACAGCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTTGCCATGCTCTCGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTG ] [-] EMBL CB669267 [ GTGCCCAAGCAAACACTGCATGATCTTATAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGATGAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGCTTGTTGATGATCTAGAAGACTTTGACACAGGCAGGGTGCACATAATATATGGACTCTTGAAAGACCTATCTCTTACCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGCCAGCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTTGCCATGCTCTTGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCTCAAGATGTACCATTTGTTTGTTGATGCTCAGGATCAAGTGGGGATAGAGTGATACAAGAGCAGTGGAGGGTTCTATTGCTGGGCAGTCATGATCAAGTTCATCAGGTCTTACACCGAGAAAGGGGAGCGCAAGCTTTTGGATAGGTTATTGGAGGAGGCAAAAGTCAACGTCAat ] [-] EMBL CB671007 [ ATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTA TTGGGGTTCATT ] [-] EMBL CB633125 [ TTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCGTTGAAACACCAGG TTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAAGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGTAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGCTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTA TTGGGGTTCATT ] [-] EMBL CB682409 [ AGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTA TTGGGGTTCATTTTTGTCA AAAAAAAG G ] [-] EMBL CB670678 [ TTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTAATGGTTTA TTGGGGTTCATTTTTGTCACTAAAAAAA ] [-] EMBL CB674318 [ CAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTA TGGGGGTTCATTTTTGTCAC TAGAACAGTTTCACAAACAATGGAACAATCATGCATAGGAAAAAAAGAACATGTTGGTTACAGAATTCAGATGAAATGTATTGCA] [-] EMBL CB620014 [ TAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATTGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTTTTAGTGCAAAGGCTCAGGCCGATTACAGATAGCCATAATCCGAATCGTTGAAACACCAGG TTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAAGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAGCAACCAGTAGGAGTAATCGTACGCCTTTG CTGGAACAAAGACAAATCAGGCCCATGTTGGTATTGATCTGTTGAAGAACAACAGCTCTTTTGAAAGTTGTTGCTGAGTTGTTTTTAGGGATCTGTAGGTTTCAGCTGCTTCCATTGTAGGGGTTTCAGATATAAAA ] [+] EMBL BI813115 [ cgTTGAAAC CCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGC TTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCCGTAGGAGCCATCGTACGCCTTTG CTGGAACCAAGAC AATCAGGACCATGTTTGTATTGATCTGTTGAAGAAC ACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCC TTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTATTTGGGGTTCATTTTTGTCACTAAAAAAAaaa ] [+] EMBL BI801981 [ TGAAACACCAGG TTATCCTCTCGAGCTTGTCATGGAATGGTATAACTGCGTTTGCCAAGTACTCCACAGAGAATCCAGGGTGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGTAATCGTACGCCTTTGTCTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGAACAACAGCTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTT GGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGT CCAGGGTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTTA TTGGGGTTCATTTTTGTCA CTAAAA ] consensusID : consensus_15076#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [AGCCAGGATGGTTCAGGTGTTTCTTCACGACATTGAGCGAACATGATATCCTTGTATTAGTGCAAAGGCTCAGGATGATTACAGATAGCCATAAGCCGAATCATTGCACCACCAGGATTATCCTGTCGAGCTTGTCAAGGAAAGGAATAACTGTTTTGGCAGGTCCTCCACAGAGAATGCGGGGGGCATAGAGGAAAAAGATGGTATCATCCTTTTTTACCAGGGGAACTCCTCCTAACCACCAGTAGGAGCAATCGTCCGCCTTTGGTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATTTGTAGAAGAACAACAGTTCTTTTGAAAGTTGTTGAGGAGTTGCTTTTATTGATTTGTAGGTATCAGCTGCCTCCATTGTGGGGGTTTCAGATAGAAAATCCCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTTTTTTTGTAGGTCCATTGCGACATAAGGTAGTGGGGGGTTTTTGTTTGGGGAGTTAGAAAATCACTTCCTGCTTGCGCCAGGGTTTTGGACGCGAATCATATGTTGTCATCAAAATTATTTATTTAGGGGGGTTCATTTTCGTCAGTAGAACAGTTTCACCAACAATGGAACAATCATGCATAGGAAAAAAAGAAC] [-] EMBL CB657889 [AGCCAGGATGGTTCAGGTGTTTCTTCACGACATTGAGCGAACATGATATCCTTGTATTAGTGCAAAGGCTCAGGATGATTACAGATAGCCATAAGCCGAATCATTGCACCACCAGGATTATCCTGTCGAGCTTGTCAAGGAAAGGAATAACTGTTTTGGCAGGTCCTCCACAGAGAATGCGGGGGGCATAGAGGAAAAAGATGGTATCATCCTTTTTTACCAGGGGAACTCCTCCTAACCACCAGTAGGAGCAATCGTCCGCCTTTGGTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATTTGTAGAAGAACAACAGTTCTTTTGAAAGTTGTTGAGGAGTTGCTTTTATTGATTTGTAGGTATCAGCTGCCTCCATTGTGGGGGTTTCAGATAGAAAATCCCCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTTTTTTTGTAGGTCCATTGCGACATAAGGTAGTGGGGGGTTTTTGTTTGGGGAGTTAGAAAATCACTTCCTGCTTGCGCCAGGGTTTTGGACGCGAATCATATGTTGTCATCAAAATTATTTATTTAGGGGGGTTCATTTTCGTCAGTAGAACAGTTTCACCAACAATGGAACAATCATGCATAGGAAAAAAAGAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15076#0 CACCCCCCGCCTATGCACGCCCGCCGCGCGTGGCGCCGGGCGGCGGGGTGACGTGACGTC 60 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 ATCTCCTCGTCGGTCGGCGTCCCATGAGGCGGAGCGGCAACGGCGGCGCGGCGAAGAAGA 120 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 AGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGC 180 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 GCATCGTGGTGCCGCTGCAGGGGGTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCC 240 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACATCAAGCGCAACCGCGCCTCGC 300 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 CGCCGCCGCCGCCCGGATCCCCCACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACC 360 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 GCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCG 420 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 GCGCCTCCGTCCGCGACGACGACTCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCG 480 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 ACCCCTACCACCCGGTCACCAACCCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACT 540 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 ACCTGTCGCTGGATTTGGTTGGGAGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCA 600 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TGGCGGGCGGAGAAGACGAGGACGAGAGGGAGCTCTCCATCAGAGGCCTCGCCGCCTACC 660 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 AGCCGTACGACGGGATACTTGCCTTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCA 720 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TGCAAGGATCAGTGTCCTTTGAACCATCTCAGGTGGTTATAACATCTGGTGCAACTCCTG 780 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 CAATGGAAATACTGAGTTTCTGCCTTGCTGATCCAGGAAATGCATTTCTTGTTCCATCAC 840 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 CATACTACCCTGGGTGGGACAGGGACATAAAATGGCGCACTGGAATTGAGTTGATACCTG 900 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TTCCTTGCCGTAGCACTGACAACTTCAACATTAGTATCACTGCTCTAGAAATAGCCTACA 960 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 ATCAGGCAAAGAAGCGAGGAATAAAGGTTCGTGGGGTTCTCATATCCAACCCAAATAACC 1020 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 CTACAGGAAGCTTTGTGCCCAAGCAAACACTGCATGATCTTCTAGAGTTTGCTGCAGAGA 1080 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 AGAACATCCACTTGATATCTGATGAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAAT 1140 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TTGTAAGTGTGGCAGAGGTTGTTGATGATCTAGAAGACTTTGACAAAGGCAGGGTGCACA 1200 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TAATATATGGACTCTCGAAAGACCTATCTCTTGCCGGGTTTCGGGTTGGGGTAATATATT 1260 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 CCTATAATGAAAGCATCGTGACAGCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAA 1320 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 CTCCAACACAACGCTTGCTTGTTGCCATGCTCTCGGACCAAAAGTTCATTTCAGATTACC 1380 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 TAAAAGTTAATAGAGAGAGATTGCGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATC 1440 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 AAGTGGGGATTGAGTGCTACAAGAGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCA 1500 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 AGTTCATCAGGTCTTACAGCGAGAAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGG 1560 consensus_15076#1 ------------------------------------------------------------ consensus_15076#0 AGGCAAAGGTCAATGTCACTCCAGGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCA 1620 consensus_15076#1 ---------------------------------------------AGCCAGGATGGTTCA 15 **** ********** consensus_15076#0 GGTGTTGCTTCACGACATTGAGCGAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGA 1680 consensus_15076#1 GGTGTTTCTTCACGACATTGAGCGAACATGATATCCTTGTATTAGTGCAAAGGCTCAGGA 75 ****** ***************************** *** ******************* consensus_15076#0 CGATTACAGATAGCCATAAACCGAATCATTGAAACACCAGGATTATCCTCTCGAGCTTGT 1740 consensus_15076#1 TGATTACAGATAGCCATAAGCCGAATCATTGCACCACCAGGATTATCCTGTCGAGCTTGT 135 ****************** *********** * *************** ********** consensus_15076#0 CATGGAATGGAATAACTGCTTTGCCAGGTACTCCACAGAGAATCCAGGGGGCATAGAGGA 1800 consensus_15076#1 CAAGGAAAGGAATAACTGTTTTGGCAGGTCCTCCACAGAGAATGCGGGGGGCATAGAGGA 195 ** **** ********** **** ***** ************* * ************** consensus_15076#0 AAAAGATGGTATAATCCTTCTTTACCATGGGAACTACTCCTAACAACCAGTAGGAGCAAT 1860 consensus_15076#1 AAAAGATGGTATCATCCTTTTTTACCAGGGGAACTCCTCCTAACCACCAGTAGGAGCAAT 255 ************ ****** ******* ******* ******** *************** consensus_15076#0 CGTACGCCTTTGCTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATCTGTTGAAGA 1920 consensus_15076#1 CGTCCGCCTTTGGTGGAACAAAGACAAATCAGGACCATGTTTGTATTGATTTGTAGAAGA 315 *** ******** ************************************* *** ***** consensus_15076#0 ACAACAGTTCTTTTGAAAGTTGTTGCTGAGTTGCTTTTATTGATCTGTAGGTCTCAGCTG 1980 consensus_15076#1 ACAACAGTTCTTTTGAAAGTTGTTGAGGAGTTGCTTTTATTGATTTGTAGGTATCAGCTG 375 ************************* ***************** ******* ******* consensus_15076#0 CTTCCATTGTAGGGGTTTCAGATAGAAAATTGCCCATCTGTTGATAGGTTAAATCAAGCA 2040 consensus_15076#1 CCTCCATTGTGGGGGTTTCAGATAGAAAATCCCCCATCTGTTGATAGGTTAAATCAAGCA 435 * ******** ******************* **************************** consensus_15076#0 TAAGTTCATTCTCTCTGTAGGTCCATTGTGACATAAGCTAGTGTTGGGTTTTTGTTTTGT 2100 consensus_15076#1 TAAGTTCATTTTTTTTGTAGGTCCATTGCGACATAAGGTAGTGGGGGGTTTTTGTTTGGG 495 ********** * * ************* ******** ***** ************ * consensus_15076#0 GAGTTTGTAAATCAGTTCCTGCTTGTGCCAGGGTTTTGGACGCGACTCATATGTTGTCAT 2160 consensus_15076#1 GAGTTAGAAAATCACTTCCTGCTTGCGCCAGGGTTTTGGACGCGAATCATATGTTGTCAT 555 ***** * ****** ********** ******************* ************** consensus_15076#0 CAAAATTATTTATTTATTGGGGTTCATTTTTGTCAAAAAAAAGGT--CACAAACAATGGA 2218 consensus_15076#1 CAAAATTATTTATTTAGGGGGGTTCATTTTCGTCAGTAGAACAGTTTCACCAACAATGGA 615 **************** ************ **** * ** ** *** ********* consensus_15076#0 ACAATCATGCATAGGAAAAAAAGAACATGTTGGTTACAGAATTCAGATGAAATGTATTGC 2278 consensus_15076#1 ACAATCATGCATAGGAAAAAAAGAAC---------------------------------- 641 ************************** consensus_15076#0 A 2279 consensus_15076#1 - |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||