cluster # 15121

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Oryza sativa
cluster # 15121 cluster # 15121 Sequences # 20 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15121#0 length = 1918 sequences # 19

consensus_15121#1 length = 177 sequences # 1

consensusID : consensus_15121#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1918
fasta sequence

                              [GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTTCGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC-GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCCTCCCTCCCC-TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAGGGATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTATAGGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCCATTGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAACACCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAATGGATTCTTGAATATAATAAAAACAAAAATATAA]

[+] EMBL CB666087             [GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTTCGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGCGCTTCGAACTCGCGGCGATACTGACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB665997             [GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTTCGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTCTTCAACCCCATCACCACCACGGAGATCGTCCTCCCGCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB640424             [                                                                      CGGGGTACCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACtgttttttc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB642358             [                                                                                      GATCACCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTCTTCAACCCCATCACCACCACGGAGATCGTCCTCCCGCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB624896             [                                                                                        TCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCCTCCCTCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB637264             [                                                                                            CCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTC TTTGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAAAGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB635587             [                                                                                                                      AGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCCTCCCTCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BI810114             [                                                                                                                                                  CCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGCTGTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAA GGGTGG TCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAA CCCATCA CACCACGGAGATCGTCCTCCCTCCCCGTGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAAGCCCG CAAGGACGACTACGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF326185             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gGGTAAGGTCTACTGCCTCACGAGGTGCGGATACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF326728             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGTGTTTTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAGGGATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTATAGGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCCATTGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAACACCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB666088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAA                                  ]
[-] EMBL CB679010             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCCCCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTAGAAGGAAACAATCGCTGTCATCTTGTTGAGC TGTAaaaaaagga                                                     ]
[-] EMBL CB665998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCGTCATATTATGATGGAATAAGAAAATGGATTCT                          ]
[-] EMBL CB635588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCAGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAA                                  ]
[-] EMBL CB664125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTTGACATGGAAACCGGGAGGTTTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATTTGCTGGTTTTTTTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCCCAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCCCCGATCCCGATGATAGAAGTTTGAGCTTATGTTCCATAGCAAAAGTGTGATTTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTTTCTGTTTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAA                                  ]
[-] EMBL CB642359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTTTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTTGACATGGAAACCGGGAGGTTTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATTTGCTGGTTTTTTTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGGAGGGGAGTTTTTCAGACCCGATCAAGGTCCCGTGCGGAACGTGCCCAGGATATGGAAGAGTAATGCGTCGCCCGATTGCTTGGTGACATAGTGGGTTTCCCCGATCCCGATGATAGAAGTTTGAGCTTATGTTCCATAGCAAAAGTGTGATTTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTTTTTGTTTAGTTGGGCTTAAGTAACTTGTATCATCCTTATATATTTGTGTAAAGAAACAATCGCTGTCATCTTGTTGAGCGTGTATTCTTCATATTATGATGGAATAAGAAAATGGCTTTTTGAATATAATAAAAACAAAAATATAA]
[-] EMBL CB637265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTTTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAGCGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTAT                                                 ]
[+] EMBL CF302082             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATC                                                        ]
[+] EMBL AK058824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAATGG                               ]




>consensus_15121#0
GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTT
CGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAG
CCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACC
TGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGCGT
GCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACG
CCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGA
TACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGC
TCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCC
TCCCTCCCCTGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCG
CCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCG
CGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCA
CCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGC
ACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAG
AACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTA
GGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAGGG
ATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTATA
GGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCCAT
TGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAACA
CCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGA
TCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTG
TATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATG
CTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGT
ATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTA
GGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGG
TTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAG
TGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTG
CGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGG
GTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTG
AACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTA
TTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGT
ATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCA
TCATATTATGATGGAATAAGAAAATGGATTCTTGAATATAATAAAAACAAAAATATAA

consensusID : consensus_15121#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 177
fasta sequence

                              [GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTGGGCTGTTGCCACGTGCCTGNTGTGCTGTGTCTGGCGCTTGTCTGCCTGTGCTGNTCTGCCGGGGGTGGCTCCTCGTTGGCTT]

[+] EMBL BM422214             [GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTGGGCTGTTGCCACGTGCCTGNTGTGCTGTGTCTGGCGCTTGTCTGCCTGTGCTGNTCTGCCGGGGGTGGCTCCTCGTTGGCTT]




>consensus_15121#1
GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCT
GGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTGGGCTGTTGCCACGTGCCTGNTGTGC
TGTGTCTGGCGCTTGTCTGCCTGTGCTGNTCTGCCGGGGGTGGCTCCTCGTTGGCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15121#0      GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTT 60
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAG 120
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACC 180
consensus_15121#1      -------------------------GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACC 35
                                                ***********************************

consensus_15121#0      TGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGC-GCGGGGCG 239
consensus_15121#1      TGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTG 95
                       *************************************************** ** * * *

consensus_15121#0      TGCACGGCGTGGCG-GTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGA 298
consensus_15121#1      GGC-TGTTGCCACGTGCCTGNTGTGCTGTGTCTGGCGCTTGT-CTGCCTGTGCTGNTC-- 151
                        **  *  *   ** * * *   **  *     * ***  *  ** *  ******  *  

consensus_15121#0      CGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGC 358
consensus_15121#1      TGCCGGGGGTGGCTCCTCGTTGGCTT---------------------------------- 177
                        *** **    ** *****  *** *                                  

consensus_15121#0      GATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGC 418
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGT 478
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CCTCCCTCCCCTGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCC 538
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCAC 598
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCT 658
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGT 718
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATC 778
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      AGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGC 838
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAG 898
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GGATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTA 958
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TAGGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCC 1018
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      ATTGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAA 1078
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CACCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCA 1138
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCG 1198
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGA 1258
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGAT 1318
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGG 1378
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTT 1438
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATAT 1498
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      AGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCG 1558
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGT 1618
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATC 1678
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTT 1738
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      TATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTC 1798
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      GTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATT 1858
consensus_15121#1      ------------------------------------------------------------
                                                                                   

consensus_15121#0      CATCATATTATGATGGAATAAGAAAATGGATTCTTGAATATAATAAAAACAAAAATATAA 1918
consensus_15121#1      ------------------------------------------------------------