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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15144#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1248 fasta sequence
[CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTTCTCCCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA-AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA-CCCAGA-TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCACATTCATTTCCTTTTGAATGTGACTTATGTTATTTGCAAAAAA]
[+] EMBL CF295030 [CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTTCTCCCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCCCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAG ]
[+] EMBL CF279071 [ CCATTCCATTCGGCATACATTCCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTTCTTTAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTT TTTTTTGCTCTTTCAACATTTGTTGCAGACGAGAACACATCTGG ATAAATTTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGAGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCT ]
[+] EMBL CF333998 [ CCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCGACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAANAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCAC ]
[+] EMBL CF280222 [ CCATTCCATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCT ]
[+] EMBL AK099479 [ ATTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAAC ]
[+] EMBL CF332157 [ CGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTG ATATAACTGTTCTGAAC ACTTGCAGAAGA AACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTT ]
[+] EMBL CF321619 [ CGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGA ]
[+] EMBL CF328462 [ TCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCCCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGTAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTT ]
[+] EMBL AK061569 [ CCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCA ]
[+] EMBL AK104768 [ CCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCA ]
[-] EMBL CF328461 [ GTCATGAAGGCCAAGTGAAAA AATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTAGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTAaaaaa ]
[+] EMBL AA751552 [ acGAGAA TGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCA ]
[-] EMBL CF328880 [ GTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGATTTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAAaaaa ]
[-] EMBL CF332158 [ AGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACA CCCAGA TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGAAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCACATTCATTTCCTTTTGAATGTGACTTATGTTATTTGCAAAAAA]
[-] EMBL CF279070 [ TGGAGCGCCCACACCCCAGA TTCAGAGTGGGAAGGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAAACTCACATTCATTTCCTTTTGAATGTGACTTAcaaaaa ]
[-] EMBL CF281821 [ AGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTGCACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAAGCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCAaaaaaaaaa ]
consensusID : consensus_15144#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1053 fasta sequence
[TAGAAAATTTTTTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCAACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGATTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCAAAAAACCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAAAAAAAAAAAAAAA]
[+] EMBL CF294979 [TAGAAAATTTTTTCGGCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCGCCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTGGAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATCTGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACCCATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATCGGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACAGCTCTTTGCTCTGTCACCAACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGACTAATCACCAGCCAAGTCC ]
[-] EMBL CF294978 [ TTGATAAGTCTTGGGCCTGCTGAATCTTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGATTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCAAAAAA ]
[-] EMBL CF321620 [ GTCATGAAGGCCAAGTGAAAAAATCGTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAACAACTTGCAGAAGACAATTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGTTATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGATTAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACATCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATATCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTTGTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCAGTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTGCAAAAAAAAAAAAAAAAA]
[-] EMBL CF280223 [ GCCCACACCCAGATTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15144#0 CGAATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTTCTCCCATTCCATTCG 60
consensus_15144#1 ----------------------------------TAGAAAATTTT-----------TTCG 15
****** * ** ****
consensus_15144#0 GCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCG 120
consensus_15144#1 GCATCCGCTTCTCGGTGGGCAACGCGACGGCGGCGGAAAGCCAAGGCCAACGATGCAGCG 75
************************************************************
consensus_15144#0 CCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTG 180
consensus_15144#1 CCTCTCCCGCTTCGTCCCCTCCTCCTCCAGGAGAGTCACTGACCTAAAGGATGCTCTCTG 135
************************************************************
consensus_15144#0 GAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATC 240
consensus_15144#1 GAGTGGTTCTTTGACTTTCCAACATGCTCTTTCAACATTTGCAGCAGACGAGAACACATC 195
************************************************************
consensus_15144#0 TGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACC 300
consensus_15144#1 TGGTAGAAAATTTGCAAGCTACACCGTGTTCAAGGGAAAGGCTGCACTTTCTATGCAACC 255
************************************************************
consensus_15144#0 CATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATC 360
consensus_15144#1 CATACTGCCAAGCTTCAGCAAACTGGAATCTGGAGGATCTCGTGTGAACAAAAATGGATC 315
************************************************************
consensus_15144#0 GGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACA 420
consensus_15144#1 GGTGATGTTGACTTTTTTCCCGGCTGTGGGACAAAGGAAATATGATTATTCAAAGAAACA 375
************************************************************
consensus_15144#0 GCTCTTTGCTCTGTCACCTACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATC 480
consensus_15144#1 GCTCTTTGCTCTGTCACCAACTGAAGTCGGAAGCTTGATAAGTCTTGGGCCTGCTGAATC 435
****************** *****************************************
consensus_15144#0 TTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATC 540
consensus_15144#1 TTGTGAATTTTTCCATGATCCCTCCATGAAATCAAGTCATGAAGGCCAAGTGAAAAAATC 495
************************************************************
consensus_15144#0 GTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAA 600
consensus_15144#1 GTTGTCAGTCACTCCTCTCGGCAATGACAGTGGATACTTTCTGAATATAACTGTTCTGAA 555
************************************************************
consensus_15144#0 CAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGT 660
consensus_15144#1 CAACTTGCAGAAGACAACTGAGCGACTTTCACTCCCAATCTCAAAAGCTGAGTTTACAGT 615
************************************************************
consensus_15144#0 TATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGAC 720
consensus_15144#1 TATGCGCACAGCATTGAGTTTCGCATTGCCGCACATCTTGGGCTGGGACCAGGCCTTGAT 675
***********************************************************
consensus_15144#0 TAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGA 780
consensus_15144#1 TAATCACCAGCCAAGTCCATCACCAGCTAGCAAGCCCAGGGTGGAGCGCCCACACCCAGA 735
************************************************************
consensus_15144#0 TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACA 840
consensus_15144#1 TTCAGAGTGGGAAAGGTGAAGCTCCCTTGTAGGCACCAGCAGCATGGAGGGATTTGAACA 795
************************************************************
consensus_15144#0 TCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATA 900
consensus_15144#1 TCATCGCTACCAAAATTTGGATGCTGTTGCACTTTCTCCACGAAATCGAATTAGGAGATA 855
************************************************************
consensus_15144#0 TCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACACCATGAAGGGTT 960
consensus_15144#1 TCTATTAGATTCATGGAGCTAAAGATCGAATGTCACAGATTGAGCACCCCATGAAGGGTT 915
*********************************************** ************
consensus_15144#0 GTGTTTGTTCAATGCATGTTTGAACTTCACCAGGCCTACTAGTTGCAAAATTCTACTCCA 1020
consensus_15144#1 GTGTTTGTTCAATGCATGTTTGAACTTCAAAAAACCTACTAGTTGCAAAATTCTACTCCA 975
***************************** * **************************
consensus_15144#0 GTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTG 1080
consensus_15144#1 GTTAGCTATGCATTGCGTTTGACACCTTGTGCCTTTTGAATGTGTGACTTATGTTATTTG 1035
************************************************************
consensus_15144#0 CAAAATGGTGGAGTCTTACAAAACTACTCAAACGTAGTTGAGTGGTTATGGCTTTAAAAA 1140
consensus_15144#1 CAAAAAAAAAAA-----AAAAAA------------------------------------- 1053
***** * * ****
consensus_15144#0 GCTAAACAAAAAACATATCTGTTTGTTAAGGCTCAAACTTTTTATTCCACTGCATCTTAA 1200
consensus_15144#1 ------------------------------------------------------------
consensus_15144#0 ACTCACATTCATTTCCTTTTGAATGTGACTTATGTTATTTGCAAAAAA 1248
consensus_15144#1 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||