These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15158#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1887 fasta sequence [TTGCTCGTGCTGCCCCCGAGATCTAACCAAAACCCGCGTCCCATCTCACCTCGCCTCACCTCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG-AAGTGCTTCCTTTCT-GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC-GGG-CTTGAAAAAGAAGCTCAACT-CAAGTCCAGGCCTGCAAAGAG-CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAAC-TTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTGAATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGGTTCTACCAACGATTAAGGAATTGGGCCGAACACGCATGGAGATAAATGTTAAAGTTAAGAGTGTTTTTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAGCAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCCTAGTGTGG-AAGATCAGGAAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA-TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT-CCCAGGTATTTGGCACGGTTATTT-CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA-TGTATATTACATATGACACCACTTT-TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA-AATTTTCCTGGGTTCTTGTAATCGTTTTGACA-CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA-TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK102342 [TTGCTCGTGCTGCCCCCGAGATCTAACCAAAACCCGCGTCCCATCTCACCTCGCCTCACCTCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAG CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAAC TTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTGAATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGGTTCTACCAACGATTAAGGAATTGGGCCGAACACGCATGGAGATAAATGTTAAAGTTAAGAGTGTTTTTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAGCAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCCTAGTGTGG AAGATCAGGAAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGA ] [+] EMBL AU063368 [ CCTCACCTCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGNGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTC GGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGAT ] [+] EMBL AU184252 [ ACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAAC ] [+] EMBL AU165860 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTNCCTTACT GGAATGCCTGATCTG AATTGGGATTAAATGACAAGATC GGG CTTGAAAAAG AGCTNCACC CAAG CCAGGCCTGCCAA AG CGGGAA ACCNTT ] [+] EMBL AU162307 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCTGGGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAGCCGGNAAGACCATTGAGCCTGATGATGTCAC ] [+] EMBL AU165871 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACTCCAAGTCCAGGCCTGCAAAGAG CGGAAAGNCCATTGAGCCTGATGATGNCACATTCCACCAGTGT ] [+] EMBL AU165861 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTNCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATCNGGGCCTTGAAAAAG AGCCCCACT CCAGTCCAGGCCTNCAAA ] [+] EMBL AU165857 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGANGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATGAAAGTGCTTCCTTTCT GGAAT ] [+] EMBL OSR33931A [ AGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGNGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAG CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAACTTTGACAAGATTTAACTCAGAAAAGACAGTCAG ] [+] EMBL CF331516 [ aaATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAG CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAAC TTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTGAATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGTTTCTACCAACGATTAAGGAATTGGGCCGAACACGCATGGATATAAATGTTAAAGTTAAGAGTGTTTTTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAGCAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCCTA ] [+] EMBL AU032057 [ ATCTGGGAAANCCAAATATAATGCTNCAATTGATTCCCTAGTGTGG AA ATCAGGAAGTTCCCTGGACAAACTGAGGCAACCATGATTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAANGAAANCATGGAACAGGCCNCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGTCCCCAGGTATTTGGCACGGTTATTTCCAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAA ] [-] EMBL CF331517 [ AATATAATGCTTCAATTGATTCCCTAGTGTGG AAGATCAGGAAGTTTCCTGGACAAACTGAGGCAACCATTAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACGACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTAATTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACACATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTaaaaaaaa ] [+] EMBL AU030727 [ AATTGATTCCCTAGTNTGGAAAGATCAGGANNTTTCCTGGACAAACTGAGGCAACCATGANTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTNNCTTGCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU030654 [ GAAGTTTCCTGGACAAACTGAGGCAACCATGAGTNCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU030646 [ GAAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU030656 [ AAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGNACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA] [+] EMBL BM421761 [ TGATTCCCGAAGTTGA CTGATTTCTACAATGGGGGAAAAGAAATCATGGAACA GCCGCCAATTCAGATGGAATTTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAA GTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCACTGTATATTACATATGACACCACTTTGTTCTTTAAGCTATTACTTTGGCAAAGGGCAGAGCAGAGCAGACACAATTTTCCTGGGTTCTTGTAATCGTTTTGACACCGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATC ATATACATATACTCATT GCAGTTTGTATTGCTTTCTTACNTAAATTGATGGGTGAATTCACTT CAA ] [+] EMBL AU092948 [ GTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTNAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAA ] consensusID : consensus_15158#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 643 fasta sequence [AGTNNGGAATCTNCTGTTAATTTCTCTGCACNNATCTGANGCATCNCATGNGCGCCNACAGTTNNCNCTGATNTCCTNAATNGGGTGNANAANAANCCACGNNNACAGGCCNCCNACTCAGATGGAACTCCAGGTTCCTANGTCTACNCGCCTCTGNNCTACCGNNNCNCGGTCCCTTAAAGGTGTTGTGAGNCTGNNCNNTTAAANCNCCGTTGNNTGGGTCCGCTNCNTCANNGNGGCTNNATCANATGNNGATAANGTGNTANCGATGAAGNAAAAANTCCCAGGTATTTGGCACGGNTATTTCCAAGGATTCGCGGAGCCTTCNNACTAGTACGGCGTCATGAATGATCATAAAGCATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU030655 [AGTNNGGAATCTNCTGTTAATTTCTCTGCACNNATCTGANGCATCNCATGNGCGCCNACAGTTNNCNCTGATNTCCTNAATNGGGTGNANAANAANCCACGNNNACAGGCCNCCNACTCAGATGGAACTCCAGGTTCCTANGTCTACNCGCCTCTGNNCTACCGNNNCNCGGTCCCTTAAAGGTGTTGTGAGNCTGNNCNNTTAAANCNCCGTTGNNTGGGTCCGCTNCNTCANNGNGGCTNNATCANATGNNGATAANGTGNTANCGATGAAGNAAAAANTCCCAGGTATTTGGCACGGNTATTTCCAAGGATTCGCGGAGCCTTCNNACTAGTACGGCGTCATGAATGATCATAAAGCATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15158#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence [GGAATCGCAAGTGTGTTCCGTGGGTGTCCGTTGGTAAGTCGCTNTTTGACACACTCGGGAGTAGTCTACGGTATGTCCCCCGTGAGGTCGTTGCTTTTGTGTGGTAGGGCAGTAGTGTGTGTCAGTGTGTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCATATACATATACTCATTGGCAGTTAAAAA] [+] EMBL BQ908616 [GGAATCGCAAGTGTGTTCCGTGGGTGTCCGTTGGTAAGTCGCTNTTTGACACACTCGGGAGTAGTCTACGGTATGTCCCCCGTGAGGTCGTTGCTTTTGTGTGGTAGGGCAGTAGTGTGTGTCAGTGTGTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCATATACATATACTCATTGGCAGTTAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15158#0 TTGCTCGTGCTGCCCCCGAGATCTAACCAAAACCCGCGTCCCATCTCACCTCGCCTCACC 60 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 TCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGC 120 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 GGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCG 180 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 AGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGG 240 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 ACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCA 300 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 GGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCT 360 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 GTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATG 420 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 CTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACT 480 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 TTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAACTTTGTTTTAATCTATGAGCTTC 540 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 TTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGT 600 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 ATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTC 660 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 CGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACA 720 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 AGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAG 780 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 GGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATGAAGTGCTTCCTTTCTGGAA 840 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 TGCCTGATCTGAAATTGGGATTAAATGACAAGATCGGGCTTGAAAAAGAAGCTCAACTCA 900 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 AGTCCAGGCCTGCAAAGAGCGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGT 960 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 GTGTCAACTTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTG 1020 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 AATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGGTTCTAC 1080 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 CAACGATTAAGGAATTGGGCCGAACACGCATGGAGATAAATGTTAAAGTTAAGAGTGTTT 1140 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 TTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAG 1200 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 CAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCC 1260 consensus_15158#1 ------------------------------------------------------------ consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 TAGTGTGGAAGATCAGG--AAGTTTCCTGGACAAA-CTGAGGCAACC-ATGAGTGCCGA- 1315 consensus_15158#1 -AGTNNGGAATCTNCTGTTAATTTCTCTGCACNNATCTGANGCATCNCATGNGCGCCNAC 59 consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 AGTTGA-GCTGATTTCTACAATGGGG--GAAAAGAAATCATGGAA-CAGGCCGCCAATTC 1371 consensus_15158#1 AGTTNNCNCTGATNTCCTNAATNGGGTGNANAANAANCCACGNNNACAGGCCNCCNACTC 119 consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 AGATGGAATTCCAGGTTCCTATGTTTACT-GCTTCTGGGTTAC--GAGTTCGGTTCCTTA 1428 consensus_15158#1 AGATGGAACTCCAGGTTCCTANGTCTACNCGCCTCTGNNCTACCGNNNCNCGGTCCCTTA 179 consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 A-GGTGTGGGAGAA--GAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGG 1485 consensus_15158#1 AAGGTGTTGTGAGNCTGNNCNNTTAAANCNCCGTTGNNTGGGTCCGCTNCNTCANNGNGG 239 consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 CTGGATCATATGAG-ATAAGGTGTTAGCGATGAAGAAAAAAGTCCCAGGTATTTGGCACG 1544 consensus_15158#1 CTNNATCANATGNNGATAANGTGNTANCGATGAAGNAAAAANTCCCAGGTATTTGGCACG 299 consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 GTTATTTC-AAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAG 1603 consensus_15158#1 GNTATTTCCAAGGATTCGCGGAGCCTTCNNACTAGTACGGCGTCATGAATGATCATAAAG 359 consensus_15158#2 ------------------------------------------------------------ consensus_15158#0 CATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAG 1663 consensus_15158#1 CATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAG 419 consensus_15158#2 ------------------------GGAATCGCAAGTGTGTTCCGTGGGTGTCCGTTGGTA 36 ** * * ** * * ** * * * consensus_15158#0 CAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCC 1723 consensus_15158#1 CAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCC 479 consensus_15158#2 AGTCGCTNTTTGACACACTCGGGAG-TAGTCTACGGTATGTCCCCCGTGAGGTCGTTGCT 95 ** * * *** * ** ** * ** * * * * * ** * consensus_15158#0 CCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAG 1783 consensus_15158#1 CCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAG 539 consensus_15158#2 TTTGTGT---GGTAGGGCAGTAGTGTGTGTCAGTGTGTGTATATGAGAAGATGGCGGTAG 152 ** ** * * * * **** * * * * *********************** consensus_15158#0 CGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATT 1843 consensus_15158#1 CGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATT 599 consensus_15158#2 CGTTTGTTCTTGTTGATCA-TATACATATACTCATTGGCAGTTAAAAA------------ 199 ******************* *********************** * consensus_15158#0 AAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA 1887 consensus_15158#1 AAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA 643 consensus_15158#2 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||