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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15161#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 803 fasta sequence
[CCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTTGGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCTAAAGACAACTCATCTCACAAGGGGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTCTGAAAATCACAAATGAACATGTCAGCATGCGACTCAAAAGCTCCACAACAACGTATTGCAAGATAAAGAGGGAAACCGCCTCAAACTGTAAATAACAAGAAGCTGATACCATATAGTTCATTTCAAAACATATTTCAACCACACACCATGATTAATTGAAGCAGTGATATAAACCACAAAATCATTACCCAGATTCCATGCTTACCTCGTTATCTGAAATCATTAACCAGATTCCATGTTATCTGAATTAACATCAGCAGATTAAGTCTAGCATCCATTGGGTTTAACATCACAACGATTTCCTATCAGACAACAGTTGACTGGATGATTTACTGAAATAAAAATGGACTTATGCACTAAGTTTCTTGATGAGGAAAACTGATTTGGTTGTTCTGGGATGCAATATTCATGCCAAAAGTTGTAGGATCCATTTTTCGTTTGACTTAGATTCACCAAAAGCCAACAATCCTTTCACAAAACTGATGGAATGATTAACCTTTACC]
[+] EMBL CB661849 [CCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTTGGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCTAAAGACAACTCATCTCACAAGGGGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTCTGAAAATCACAAATGAACATGTCAGCATGCGACTCAAAAGCTCCACAACAACGTATTGCAAGATAAAGAGGGAAACCGCCTCAAACTGTAAATAACAAGAAGCTGATACCATATAGTTCATTTCAAAACATATTTCAACCACACACCATGATTAATTGAAGCAGTGATATAAACCACAAAATCATTACCCAGATTCCATGCTTACCTCGTTATCTGAAATCATTAACCAGATTCCATGTTATCTGAATTAACATCAGCAGATTAAGTCTAGCATCCATTGGGTTTAACATCACAACGATTTCCTATCAGACAACAGTTGACTGGATGATTTACTGAAATAAAAATGGACTTATGCACTAAGTTTCTTGATGAGGAAAACTGATTTGGTTGTTCTGGGATGCAATATTCATGCCAAAAGTTGTAGGATCCATTTTTCGTTTGACTTAGATTCACCAAAAGCCAACAATCCTTTCACAAAACTGATGGAATGATTAACCTTTACC]
consensusID : consensus_15161#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 769 fasta sequence
[GGCATCCCGGCGACGAGAGAGAGAGAGAGGGGAGAAGGCTGCGCGGCGGAGATGGCGGTGGCGGACGTGGCGTTCAAGGCGCTGACGGCGGGGCTCGGGGTGGCGACGCTCTACCTCGCCGGAACCTTCTCCGTCAACGTCTACCGCGGCCTCTCGTGGCACTCGGAGCAATCCGTAAGCAAAACCCTCGCCCGCCTCGACCACCAAACCCTTGACTTCTCCCCGCCGCTCGCTGGGGAGCCGCTGATTCGGGGTCCTTCTCCGACGATCTGGTGCTACTCGCTGCATCTCCCATGTCGAATCTCCCCCCTTCCTTTGGGCCTAGGACGAGGGTTTGGGTGGATATCCTTCGACCTTTGTTCTGTTGTTTTTTTTTTGCATCGACCCATGCCTGCCAAATTGGAACATGTTTGGCCCTTTGACTTGATGCGAGCACATATATTTTTGCGTGATGCTGCTGTACTGTGCAGGAGCTATCGGTGATTTCGTGTTGCTATCTAACTGCTGCTGCTTATTTCACTTTGATTAAGTTATCATTGGCTAATTAGCTTTGTAGACGCCAAGCTAGTGTTGATGTGAATTATAGTAGTGTAATGCAGCCACTTCTTGTTTTGTTGTGTTGTGCTTGGAAAGGTAGTCATGGTTTTAGGTTACAAACCTGTTGGATGCTCAAATACAACAAAACGAGTGATATAGCATTTTCGTGGTAGTTCTGAATTTTGACATGTTTANATAGAAATGGTTCATAAAACTATTCATCGGCTTCAAT]
[+] EMBL CB661848 [GGCATCCCGGCGACGAGAGAGAGAGAGAGGGGAGAAGGCTGCGCGGCGGAGATGGCGGTGGCGGACGTGGCGTTCAAGGCGCTGACGGCGGGGCTCGGGGTGGCGACGCTCTACCTCGCCGGAACCTTCTCCGTCAACGTCTACCGCGGCCTCTCGTGGCACTCGGAGCAATCCGTAAGCAAAACCCTCGCCCGCCTCGACCACCAAACCCTTGACTTCTCCCCGCCGCTCGCTGGGGAGCCGCTGATTCGGGGTCCTTCTCCGACGATCTGGTGCTACTCGCTGCATCTCCCATGTCGAATCTCCCCCCTTCCTTTGGGCCTAGGACGAGGGTTTGGGTGGATATCCTTCGACCTTTGTTCTGTTGTTTTTTTTTTGCATCGACCCATGCCTGCCAAATTGGAACATGTTTGGCCCTTTGACTTGATGCGAGCACATATATTTTTGCGTGATGCTGCTGTACTGTGCAGGAGCTATCGGTGATTTCGTGTTGCTATCTAACTGCTGCTGCTTATTTCACTTTGATTAAGTTATCATTGGCTAATTAGCTTTGTAGACGCCAAGCTAGTGTTGATGTGAATTATAGTAGTGTAATGCAGCCACTTCTTGTTTTGTTGTGTTGTGCTTGGAAAGGTAGTCATGGTTTTAGGTTACAAACCTGTTGGATGCTCAAATACAACAAAACGAGTGATATAGCATTTTCGTGGTAGTTCTGAATTTTGACATGTTTANATAGAAATGGTTCATAAAACTATTCATCGGCTTCAAT]
consensusID : consensus_15161#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 568 fasta sequence
[GATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTCCTACACAACCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTT-GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA-GATCTTTGCATCTTACATCAAATC-AAAATAGCATTCTGG-AGATCTTGAAAGGTCTGCAAAAACAAT-CCCAGGAAACATAACTAGTCTAAAGACAACTCA--TCTCACAA-GGTG-AGTGTTTATC-TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC-GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC-CGGAG-CAG-ACGAGTAGTCTTCTCTGATTTTCTACTCCTTCAGT]
[+] EMBL CF329545 [GATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTCCTACACAACCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAAAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTC ]
[+] EMBL CF291447 [ TTTTTCCTACACAACCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAAGGGTG AGTGTTTATCTTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGACGGGAAAAGGTTCCGGCGAGGTAAAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTC ]
[-] EMBL CF329544 [ CTGTGGCATATAAAATGGCATCAATGACACCCATATGTTGGGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCT ]
[-] EMBL C99487 [ ttttTATAAAATGGCATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCA CCTTCTCCCCTCTCTCTCTCTCTCGTCGCCG ]
[-] EMBL AK058990 [ ATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTA ]
[-] EMBL CF314732 [ ttttTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCACTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCTGAT ]
[+] EMBL CF314733 [ tttttTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCACTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCTGA ]
[-] EMBL AU183928 [ tttttttTTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCT ]
[-] EMBL AU162367 [ tttttttAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG ]
[-] EMBL C73707 [ CATNAGGANC TTGCATCTTACATCAAATCAAAAATAGCATTCTGGAAGATCTTGAAAGGTCTGCAAAAACAATCCCCAGGAAACATAACTAGTCTAAAGACAACTCAATTCTCACAA GGTGAAGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGCNNGGAGCCAGNACGnangn ]
[+] EMBL CA998334 [ ATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACG ]
[-] EMBL CF313888 [ tttTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCCGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCT ]
[+] EMBL CF313887 [ ttttTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCCGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAAAAGGTTCCGGCGAGGTAAAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTC ]
[-] EMBL CF301010 [ TCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTCTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGG ]
[-] EMBL CF291448 [ CTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCTGATTTTCTACTCCTTCAGT]
consensusID : consensus_15161#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 203 fasta sequence
[TTTTTTTTTTTTTTTCGTAANCATAAAGAGGAATAATAATCATGAGATCTTTNCATCTTACATCAAATCAAAATANCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAANTAGTCTAAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACT]
[-] EMBL AU164819 [TTTTTTTTTTTTTTTCGTAANCATAAAGAGGAATAATAATCATGAGATCTTTNCATCTTACATCAAATCAAAATANCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAANTAGTCTAAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACT]
consensusID : consensus_15161#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 115 fasta sequence
[ATACGGTACGTAACGGCAAGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATT]
[-] EMBL CF331090 [ATACGGTACGTAACGGCAAGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATT]
[+] EMBL CF331089 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATAATCATGAAATCTTTGCATCTTACATCAAATCAAAATAGCAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15161#2 GATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTCCTACACAACCTTAAA 60
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 -----------------------------------------------------CCTTAAA 7
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 --GGCATCCCGGCGACGAGAGAGAGAGAGAGGGGAGAAGGCTGCGCGGCGGAGATGGCGG 58
consensus_15161#2 TGGAAACTGTGGCATATAAAATGGCATCAATGACACCCAT--ATGTTGGTCGAAATATTT 118
consensus_15161#3 ----------------------------------------------TTTTTTTTTTTTTT 14
consensus_15161#0 TGGAAACTGTGGCATATAAAATGGCATCAATGACACCCAT--ATGTTGGTCGAAATATTT 65
consensus_15161#4 --------ATACGGTACGTAACGGCAA-GACAGTGTTTTT--TTTTTTTTTTTTTTTTTT 49
consensus_15161#1 TGGCGGACGTGGCGTTCAAGGCGCTGACGGCGGGGCTCGGGGTGGCGACGCTCTACCTCG 118
*
consensus_15161#2 TCGTAAGCATAAAGAGGAATAATAATCATGAGATCTT-TGCATCTTACATCAAATCA-AA 176
consensus_15161#3 TCGTAANCATAAAGAGGAATAATAATCATGAGATCTT-TNCATCTTACATCAAATCA-AA 72
consensus_15161#0 TCGTAAGCATAAAGAGGAATAATAATCATGAGATCTT-TGCATCTTACATCAAATCA-AA 123
consensus_15161#4 TTTTTTTTTTTTTTTTTAATAATAATCATGAGATCTT-TGCATCTTACATCAAATCA-AA 107
consensus_15161#1 CCGGAACCTTCTCCGTCAACGTCTACCGCGGCCTCTCGTGGCACTCGGAGCAATCCGTAA 178
* ** * * * *** * ** * *** * **
consensus_15161#2 ATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCT 236
consensus_15161#3 ATANCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAANTAGTCT 132
consensus_15161#0 ATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCT 183
consensus_15161#4 ATAGCATT---------------------------------------------------- 115
consensus_15161#1 GCAAAACCCTCGCCCGCCTCGACCACCAAACCCTTGACTTCTCCCCGCCGCTCGCTGGGG 238
* *
consensus_15161#2 AAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGA 296
consensus_15161#3 AAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGA 192
consensus_15161#0 AAAGACAACTCATCTCACAAGGGGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGA 243
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 AGCCGCTGATTCGGGGTCCTTCTCCGACGATCTGGTGCTACTCGCTGCATCTCCCATGTC 298
consensus_15161#2 CATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGAT 356
consensus_15161#3 CATTCTAGACT------------------------------------------------- 203
consensus_15161#0 CATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTT---- 299
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 GAATCTCCCCCCTTCCTTTGGGCCTAGGACGAGGGTTTGGGTGGATATCCTTCGACCTTT 358
consensus_15161#2 TGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGACGGAGAAGGTTC-CGGCGAGGTA 415
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 ----CTGAAAATCACAAATGAACATGTCAGCATGCGACTCAAAAGCTCCACAACAACGTA 355
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 GTTCTGTTGTTTTTTTTTTGCATCGACCCATGCCTGCCAAATTGGAACATGTTTGGCCCT 418
consensus_15161#2 GAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCAT 475
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 TTGCAAGATAAAGAGGGAAACCGCCTCAAACTGTAAATAACAAGAAGCTGATACCATATA 415
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 TTGACTTGATGCGAGCACATATATTTTTGCGTGATGCTGCTGTACTGTGCAGGAGCTATC 478
consensus_15161#2 CTCCGCCGCGCAGCCTTCTCC--CCTCTCTCTCTCTCTCGTCGCCGGGATGCCGGAGCAG 533
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 GTTCATTTCAAAACATATTTCAACCACACACCATGATTAATTGAAGCAGTGATATAAACC 475
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 GGTGATTTCGTGTTGCTATCTAACTGCTGCTGCTTATTTCACTTTGATTAAGTTATCATT 538
consensus_15161#2 ACGAGTAGTCTTCTCTGATTTTCTACTCCTTCAGT------------------------- 568
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 ACAAAATCATTACCCAGATTCCATGCTTACCTCGTTATCTGAAATCATTAACCAGATTCC 535
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 GGCTAATTAGCTTTGTAGACGCCAAGCTAGTGTTGATGTGAATTATAGTAGTGTAATGCA 598
consensus_15161#2 ------------------------------------------------------------
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 ATGTTATCTGAATTAACATCAGCAGATTAAGTCTAGCATCCATTGGGTTTAACATCACAA 595
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 GCCACTTCTTGTTTTGTTGTGTTGTGCTTGGAAAGGTAGTCATGGTTTTAGGTTACAAAC 658
consensus_15161#2 ------------------------------------------------------------
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 CGATTTCCTATCAGACAACAGTTGACTGGATGATTTACTGAAATAAAAATGGACTTATGC 655
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 CTGTTGGATGCTCAAATACAACAAAACGAGTGATATAGCATTTTCGTGGTAGTTCTGAAT 718
consensus_15161#2 ------------------------------------------------------------
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 ACTAAGTTTCTTGATGAGGAAAACTGATTTGGTTGTTCTGGGATGCAATATTCATGCCAA 715
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 TTTGACATGTTTANATAGAAATGGTTCATAAAACTATTCATCGGCTTCAAT--------- 769
consensus_15161#2 ------------------------------------------------------------
consensus_15161#3 ------------------------------------------------------------
consensus_15161#0 AAGTTGTAGGATCCATTTTTCGTTTGACTTAGATTCACCAAAAGCCAACAATCCTTTCAC 775
consensus_15161#4 ------------------------------------------------------------
consensus_15161#1 ------------------------------------------------------------
consensus_15161#2 ----------------------------
consensus_15161#3 ----------------------------
consensus_15161#0 AAAACTGATGGAATGATTAACCTTTACC 803
consensus_15161#4 ----------------------------
consensus_15161#1 ----------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||