cluster # 15178

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Oryza sativa
cluster # 15178 cluster # 15178 Sequences # 20 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15178#0 length = 1217 sequences # 16

consensus_15178#1 length = 807 sequences # 1
consensus_15178#2 length = 608 sequences # 3

consensusID : consensus_15178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1217
fasta sequence

                              [CACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG-TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT-GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGA-TC-GTCAAC--AAAGATGTGATCCATTGGAAA-AAAAGGACTGAATGTATGTGCCTTAAAAAA]

[+] EMBL CF278566             [CACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCATTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGAC CAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK099448             [CACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTAAATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGA TC GTCAAC  AAAGATGT                                            ]
[+] EMBL CF276284             [CACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGGTTTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCTNGCCCCGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF279114             [ ACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGAC CAACCGATGGTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB648691             [             CAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB659517             [              AGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB644883             [              AGTAACCTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK061206             [                       TGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGA TC GTCAAC  AAAGATGT                                            ]
[+] EMBL CB676583             [                        GTGAGATATGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGCTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGAACTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSPRXRPAA            [                                TGGAGTACTCTTACAGCTACAGGTTCATGCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATCCGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTATGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGACTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATTTGCACTTCCCAACAAGACCTCTGTCAGAGGG TTCGAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGA TC GTCAAC  AAAGATGTGATCCATTGGAAA AAAAGAACTGAATGTATGTGCCTTAAAAAA]
[-] EMBL CB659518             [                                                                                                                                                                                                                                                                                                                                                                        ATCTCGAGAACATCT GCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAGGAAGCAGAAGTAATAACGATGTGATTGTGACT                                                                              ]
[-] EMBL CB676584             [                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTTGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTTTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTTTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTTTTTTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGAC                                                                               ]
[-] EMBL CB655545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGA TC GTCAAC  AAAGATGTGATCCATTGGAAA AAAAAGA                       ]
[-] EMBL CB648692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGAGGTGACAAGGGCCTCCTTTCACCGTTAGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCACCGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTAGACATCCGCTATTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTTTCCAGCGATGTCGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTTTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGATGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAATTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCCCAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATACCGATGTGATTGTGACTAGTTTGTGAACTGACTCTGTCAACCAAAAGATGTGATCCATTGGAAACAAAAGGACTGAATGTATGTCCCTTAAA   ]
[-] EMBL CF278413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTCGAAGAAGCAGAAGTAATAACGATGTGAATGTGACTAGTTTGTAAAaaaa                                                                ]
[-] EMBL CF278567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTCGTGAAaaatat                                                              ]




>consensus_15178#0
CACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCAT
GCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATC
CGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTA
TGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGA
CTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATT
TGCACTTCCCAACAAGAACTCTGTCAGAGGGTTCGAAGTCATTGACGCGATAAAGGAAGA
TCTCGAGAACATCTGCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGG
CTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGG
TCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAA
ATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATC
AGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCAC
CTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTG
TGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGA
CAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCT
CTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGA
TGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCC
ACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTT
CAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTG
TGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGT
GACTAGTTTGTGAACTGATCGTCAACAAAGATGTGATCCATTGGAAAAAAAGGACTGAAT
GTATGTGCCTTAAAAAA

consensusID : consensus_15178#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 807
fasta sequence

                              [GAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCTGCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGAAGCATGAATGCTTGAAGAAGCAGAAGTAATAACGAAAAAAAAAGA]

[-] EMBL CB644884             [GAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCTGCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGAAGCATGAATGCTTGAAGAAGCAGAAGTAATAACGAAAAAAAAAGA]




>consensus_15178#1
GAAGTCATTGACGCGATAAAGGAAGATCTCGAGAACATCTGCCCTGAAGTTGTTTCCTGC
GCCGACATTGTAGCCCTTGCAGCTGGCTATGGAGTACTATTTAGTGGAGGCCCTTACTAT
GACGTTCTTCTCGGTAGAAGGGATGGTCTTGTCGCAAATCAATCAGGAGCTGACAACGGC
CTCCCTTCACCGTTCGAACCCATCAAATCGATCATACAGAAGTTCAATGATGTCGGCCTC
GACACAACCGATGTTGTCGTCCTATCAGGAGGGCACACGATCGGACGAGCCCGGTGCACG
CTGTTCAGCAACCGGTTGTCGACCACCTCAAGCTCAGCCGACCCGACGCTGGACGCCACC
ATGGCCGCCAACCTCCAGAGCCTCTGTGCCGGTGGAGACGGCAACGAGACCACCGTGCTG
GACATCACCTCCGCCTACGTTTTCGACAACCGCTACTACCAGAACCTCCTCAATCAGAAA
GGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCGACGACGGCATCGCCAACACCAAG
GAGCTGGTGGAGACTTACAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCC
ATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAAC
TGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACT
TTTCACAAGGCGATTGAGACGATGTGTGTTATGTTTTGATGAAGCATGAATGCTTGAAGA
AGCAGAAGTAATAACGAAAAAAAAAGA

consensusID : consensus_15178#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 608
fasta sequence

                              [GCCCATCGATGTTGTAGTCTTTCGAGAGGCACCCCATTGGGGGGGCCCGGTCCACTTGTTTCACCACGTGTTGTCGACCTCTCAAGGTGCAGCGGCCGGGTGTGGGACGCACCATGGGCGCCAACTTGCAGACCTTTGTCCGGGGGAGACGGCAACGAGACCACCTGTTTGGACATCAACCTCGGCCTATGTTTAGGCAACCGTTACTACCAGAACCTCCACAATCAGAAAGGCTTCCTGTCCTCCGGACAGGGCCTCTTCTCCAGCGAGGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTCCAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGA-TGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGATCGTCAACAAAAATGTGATCCATTGGAAAAAAA]

[-] EMBL CA755379             [GCCCATCGATGTTGTAGTCTTTCGAGAGGCACCCCATTGGGGGGGCCCGGTCCACTTGTTTCACCACGTGTTGTCGACCTCTCAAGGTGCAGCGGCCGGGTGTGGGACGCACCATGGGCGCCAACTTGCAGACCTTTGTCCGGGGGAGACGGCAACGAGACCACCTGTTTGGACATCAACCTCGGCCTATGTTTAGGCAACCGTTACTACCAGAACCTCCACAATCAGAAAGGCTTCCTGTCCTCCGGACAGGGCCTCTTCTCCAGCGAGGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTCCAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGA TGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGATCGTCAACAAAGATGTGATCCATTGGAAAAAAA]
[-] EMBL CF279115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGAAAAAAAAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGA TGTGTGTTAAGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGATCGTCAACAAAAATGTGATCC TTGGAAAAAAA]
[-] EMBL CF276285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGANTGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTGTGACTAGTTTGTGAACTGATCGTCAACAAAAATGT ATCCA TGGAAAAA  ]




>consensus_15178#2
GCCCATCGATGTTGTAGTCTTTCGAGAGGCACCCCATTGGGGGGGCCCGGTCCACTTGTT
TCACCACGTGTTGTCGACCTCTCAAGGTGCAGCGGCCGGGTGTGGGACGCACCATGGGCG
CCAACTTGCAGACCTTTGTCCGGGGGAGACGGCAACGAGACCACCTGTTTGGACATCAAC
CTCGGCCTATGTTTAGGCAACCGTTACTACCAGAACCTCCACAATCAGAAAGGCTTCCTG
TCCTCCGGACAGGGCCTCTTCTCCAGCGAGGACGGCATCGCCAACACCAAGGAGCTGGTG
GAGACTTCCAGCGCAGATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAG
ATGGGCAACATCAGCCCACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTT
GTTAATTAACTGAGCTTCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAG
GCGATTGAGACGATGTGTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGT
AATAACGATGTGATTGTGACTAGTTTGTGAACTGATCGTCAACAAAAATGTGATCCATTG
GAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15178#0      CACAAGAGCAGGGCAGTAACTTCTGTGAGAGATGGAGTACTCTTACAGCTACAGGTTCAT 60
consensus_15178#1      ------------------------------------------------------------
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      GCTTGTATGCTCTGTTCTTGTACTGTGCCTTAATACTCGGGGTGCGAGATGCCAGTTATC 120
consensus_15178#1      ------------------------------------------------------------
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      CGACGATTTCTACGACTACATATGTCCTGATGTGTACACCGTTGTCCAGCAGCATGTTTA 180
consensus_15178#1      ------------------------------------------------------------
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      TGCTGCCATGAGGACTGAGATGAGGATGGGTGCCTCCCTCCTAAGGCTCCATTTCCATGA 240
consensus_15178#1      ------------------------------------------------------------
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      CTGCTTTGTCAATGGGTGTGACGGTTCCATCCTTCTGGACGGTGACGACGGCGAGAAATT 300
consensus_15178#1      ------------------------------------------------------------
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      TGCACTTCCCAACAAGAACTCTGTCAGAGGGTTCGAAGTCATTGACGCGATAAAGGAAGA 360
consensus_15178#1      ----------------------------------GAAGTCATTGACGCGATAAAGGAAGA 26
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      TCTCGAGAACATCTGCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGG 420
consensus_15178#1      TCTCGAGAACATCTGCCCTGAAGTTGTTTCCTGCGCCGACATTGTAGCCCTTGCAGCTGG 86
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      CTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGG 480
consensus_15178#1      CTATGGAGTACTATTTAGTGGAGGCCCTTACTATGACGTTCTTCTCGGTAGAAGGGATGG 146
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      TCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAA 540
consensus_15178#1      TCTTGTCGCAAATCAATCAGGAGCTGACAACGGCCTCCCTTCACCGTTCGAACCCATCAA 206
consensus_15178#2      ------------------------------------------------------------
                                                                                   

consensus_15178#0      ATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATC 600
consensus_15178#1      ATCGATCATACAGAAGTTCAATGATGTCGGCCTCGACACAACCGATGTTGTCGTCCTATC 266
consensus_15178#2      ------------------------------------GCCCATCGATGTTGTAGTCTT-TC 23
                                                             * * ********* *** * **

consensus_15178#0      AGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCAC 660
consensus_15178#1      AGGAGGGCACACGATCGGACGAGCCCGGTGCACGCTGTTCAGCAACCGGTTGTCGACCAC 326
consensus_15178#2      GAGAGG-CACCCCATTGGGGGGGCCCGGTCCAC-TTGTTTCACCACGTGTTGTCGACC-T 80
                         **** *** * ** **  * ******* ***  ****   * **  **********  

consensus_15178#0      CTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTG 720
consensus_15178#1      CTCAAGCTCAGCCGACCCGACGCTGGACGCCACCATGGCCGCCAACCTCCAGAGCCTCTG 386
consensus_15178#2      CTCAAGGTGCAGCGGCCGGGTGTGGGACGC-ACCATGGGCGCCAACTTGCAGA-CCTTTG 138
                       ****** *    ** ** *  *  ****** ******* ******* * **** *** **

consensus_15178#0      TGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCA-CCTCCGCCTACGTTTTCG 779
consensus_15178#1      TGCCGGTGGAGACGGCAACGAGACCACCGTGCTGGACATCA-CCTCCGCCTACGTTTTCG 445
consensus_15178#2      T-CCGGGGGAGACGGCAACGAGACCACCTGTTTGGACATCAACCTCGGCCTATGTTTA-G 196
                       * **** *********************    ********* **** ***** ****  *

consensus_15178#0      ACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCC 839
consensus_15178#1      ACAACCGCTACTACCAGAACCTCCTCAATCAGAAAGGCCTCCTGTCCTCCGACCAGGGCC 505
consensus_15178#2      GCAACCGTTACTACCAGAACCTCCACAATCAGAAAGGCTTCCTGTCCTCCGGACAGGGCC 256
                        ****** **************** ************* ************  *******

consensus_15178#0      TCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAG 899
consensus_15178#1      TCTTCTCCAGCGACGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTACAGCGCAG 565
consensus_15178#2      TCTTCTCCAGCGAGGACGGCATCGCCAACACCAAGGAGCTGGTGGAGACTTCCAGCGCAG 316
                       ************* ************************************* ********

consensus_15178#0      ATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCC 959
consensus_15178#1      ATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCC 625
consensus_15178#2      ATGCCCACAAGTTCTTCTGGGATTTTGGCAGATCCATGGTGAAGATGGGCAACATCAGCC 376
                       ************************************************************

consensus_15178#0      CACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCT 1019
consensus_15178#1      CACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCT 685
consensus_15178#2      CACTCACCGGTGACGACGGCCAGATTCGCAAGAACTGCAGGGTTGTTAATTAACTGAGCT 436
                       ************************************************************

consensus_15178#0      TCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGT 1079
consensus_15178#1      TCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGT 745
consensus_15178#2      TCAGTGTGTTGAAAAGATAGTAAATTTCTTGTACTTTTCACAAGGCGATTGAGACGATGT 496
                       ************************************************************

consensus_15178#0      GTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTG 1139
consensus_15178#1      GTGTTATGTTTTGATGAAGCATGAATGCTTGAAGAAGCAGAAGTAATAACGAAAAAAAAA 805
consensus_15178#2      GTGTTATGTTTTGATGTTACATGAATGCTTGAAGAAGCAGAAGTAATAACGATGTGATTG 556
                       ****************   *********************************    *   

consensus_15178#0      TGACTAGTTTGTGAACTGATCGTCAACAAAGATGTGATCCATTGGAAAAAAAGGACTGAA 1199
consensus_15178#1      GA---------------------------------------------------------- 807
consensus_15178#2      TGACTAGTTTGTGAACTGATCGTCAACAAAAATGTGATCCATTGGAAAAAAA-------- 608
                                                                                   

consensus_15178#0      TGTATGTGCCTTAAAAAA 1217
consensus_15178#1      ------------------
consensus_15178#2      ------------------