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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2582 fasta sequence
[CCCCTCTAAACCCAGAACCCCAACCCTAGCCGCCTCCCCACCCGCCGCCGCCGCCGCTCGCCGCCGGATCGTCTCGATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGCGCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGCGGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCTCAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATAT-GGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT-GAG-AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG-AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC-TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC-GGTTCCCTCCT-ATTGTT-GCTCC--TATCAAATGCACTG-TGTT---CCCCCT-GGTGAAGAATCAGGAGTTTGA-CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG-CCATTTCTATTGGG-AGGAGGTATGCAAGGACAGAT-GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT-GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT-CGTCCTGTTAACTTGTAA-GGTCGCACCAAGAATTGTTCACCT-ACCTTCAAAGTTCC-AACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTCTTAAAAAAAATACTCAGATTGTCTTGTCTCTAGTATTGCTTAAGGATTAAGGTGAATCTTTTGACTGCCTAAAAAAAA]
[+] EMBL AK119836 [CCCCTCTAAACCCAGAACCCCAACCCTAGCCGCCTCCCCACCCGCCGCCGCCGCCGCTCGCCGCCGGATCGTCTCGATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGCGCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGCGGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCTCAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATAT GGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAGGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGCAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAA ]
[+] EMBL CB631200 [ CGCGCGGACGCTGCAGGCGGCCGTCGGGGCTTCCGGCGGCGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCACGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATAT GGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGACTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATTCCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGAGATTGAGCACTTTGTGGATCCTGANGATAAATCTCACCCAAAATTTGTTGATGTTGCTGATTTGGAGTTTT ]
[+] EMBL CF322614 [ CCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAAGCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGGCCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTTGGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGCATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATGCTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCACCTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTCAGCAGATGAACTTGGCGCAAAGATTAAGGAATATGGGGATTGTTGCCCCTGATACTAAGAACCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGGTCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTT ]
[+] EMBL AK068997 [ TGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGA ]
[+] EMBL AU056541 [ CTTTCAGGGGAGTCAGCCAAGTTAGTGAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCATTGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAGGCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGAGTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCGAGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAGAGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGTGGAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAAT ]
[+] EMBL AF074380 [ GCTTTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAGAAAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACCTTAGCAAATCAGAAGAAGAACAACTGAATGTCTTCCGGGTTCCCTCCTAATTGTTGGCNCCCTTATCAAATGCACTGTTGTTTCCCCCCCTGGGTGAAAAAatcctggaa ]
[+] EMBL CA998859 [ TTTAAGGGGAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCG ]
[+] EMBL CF305615 [ GAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG C ]
[+] EMBL CF310977 [ GAAGCATTGGAGGCTATGAGT GAG AAAGAAGCAATGGACATGAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACTCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGGAAGGAGGTATGCA ]
[+] EMBL OSC26441 [ taTANGA T GAGCAAAGAAGCAATGGACATGAAATCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGATGTGGTAATAACCAAG AAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACGAGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCTATTTGAGCATTCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTN GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGNCGCTGCGAAAGTTATTGATAAAGCATTAACAA ]
[-] EMBL CB631201 [ TCCTTCTACACAAGACC TAGCAAATCAGAAGAGGAACAACTGAATGTCTTCC GGTTCCCTCCT ATTGTT GCTCC TATCAAATGCACTG TGTT CCCCCT GGTGAAGAATCAGGAGTTTGA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAGATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACACTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGGGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTC ]
[+] EMBL AU056542 [ c CCCCCT GNTGAAG ATCAGGAGTTTGACCGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTGCCCATTTCTATTGGG AGGAGGTATGCAAGGACAGATGGAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGAGTTAaaaaaa ]
[-] EMBL CF310976 [ GA CGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAACTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTCTTAAAAAAAA ]
[+] EMBL AA750507 [ TTGATAAAGCATTAACAACAGCAGGCATCTCGCATATTATTGACACTACTG CCATTTCTATTGGG AGGAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGC ]
[+] EMBL BE607470 [ GGAGGNNTGCAAGGACAGAT GAGATCGGTGTNCCATTCGCGGNAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGA ]
[+] EMBL BE040273 [ GAGGTATGCAAGGACAGAT GAGATCGGTGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGATGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTTGGCT TCTTTCAAAAGTTTTACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATTCCGTCC GTTAACTTGTAAGGGGCG ACCAAG ATTG TCACCTAACCTT ]
[+] EMBL C72367 [ GGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAAGGGTCGCACCAAGAATTGTTCACCT ANCTTtca ]
[+] EMBL AU093977 [ GGCAAAGCACCTGGGCCGATGTTNCATTTAAGTATCCCAGCCATATTGGTCCCCAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGAAGCACCCCAAATGGCCGTTGATTGACTTGAGGAGAAATAGTTCTTCCTCGTTTCATGCAATCTGGCAAGAACAAAGTTTGTCATACACAAATATACAACTCTTGGACGCCCTTACATCTCTCCATTGTTCTTTTT GCTCTCTTTCAAAAGTTTCACCTGATTTACATGTTCACAATACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCC AACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAaaaaa ]
[+] EMBL BI811953 [ ACAGAACATAGCATTTGATTTTCTGCTGAATT CGTCCTGTTAACTTGTAA GGTCGCACCAAGAATTGTTCACCT ACCTTCAAAGTTCCAAACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTAGACTCTTAGTTGTTGTACTCAGATTGTCTTGTCTCTAGTATTGCTTAAGGATTAAGGTGAATCTTTTGACTGCCTAAAAAAAA]
consensusID : consensus_15183#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence
[AGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCATTGGTGAAACAGCTGACAGATGGGCAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCACAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCTAAGATAGCACCCCAATGGCCGTTGATTGACCTTGAGGAGAAATAGTTGCTTGCCTCGTTTCCATGGCATGCTGGGCAAGAACAAGTGTTGTGCATGACACAATATACAACTGCTTGGACGCCCTTGACATGCTGCTGCCATTGTTGCTTTNTTGCTCTGCTTTGCAAAAGTTTGCACCTGGATGTTACATGTTGCACATACAGAACATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATTGTTCACCTACCTTCAAGTTCCACAACGAGCTGAAGCTTTGAGTTATTAAAAAA]
[+] EMBL BI806659 [AGGGACAGCAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCATTGGTGAAACAGCTGACAGATGGGCAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCACAGGGTGATCAGGAGTGAAAATCCTGAACCCTGTTCCTAAGATAGCACCCCAATGGCCGTTGATTGACCTTGAGGAGAAATAGTTGCTTGCCTCGTTTCCATGGCATGCTGGGCAAGAACAAGTGTTGTGCATGACACAATATACAACTGCTTGGACGCCCTTGACATGCTGCTGCCATTGTTGCTTTNTTGCTCTGCTTTGCAAAAGTTTGCACCTGGATGTTACATGTTGCACATACAGAACATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATTGTTCACCTACCTTCAAGTTCCACAACGAGCTGAAGCTTTGAGTTATTAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15183#0 CCCCTCTAAACCCAGAACCCCAACCCTAGCCGCCTCCCCACCCGCCGCCGCCGCCGCTCG 60
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CCGCCGGATCGTCTCGATGGCCTCCTCGACGACGACGTCGGAGGACGCGCTGCGCCGGGC 120
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GCTGGCGGAGAGGCAGGCGGCCGTGGACGCGCAGGCGGAGGCGGTGCGGGCGCTCAAGGC 180
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GGCGGGGGCAGCTGCGGCCAAGGCCGAGGTGGATGCCGCGGTCGAGGCGCTCAAGGCGCT 240
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CAAGGTGGAGGCCGGCGCCGCCGCGCGGAGGCTGCAGGCGGCCGTCGGGGCTTCCGGCGG 300
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CGGAGGCGGGGCCGCGCGGGAGGAGATGCGGCAGGCGGTGGTGAACACGCTGGAGAGGAA 360
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GCTGTTCTACATCCCTTCCTTCAAGATCTACCGCGGCGTCGCCGGGCTGTACGACTACGG 420
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CCCGCCGGGATGCGCCGTCAAGGCCAACGTGCTCGCCTTCTGGAGGCAGCACTTCGTTTT 480
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GGAGGAGAACATGTTGGAGGTTGACTGCCCCTGTGTGACGCCTGAGGTTGTGTTGAAGGC 540
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 ATCGGGGCATGTCGAGAAGTTTACTGACCTCATGGTTAAGGATGAGAAGACAGGCACATG 600
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CTACCGTGCTGACCACCTGTTGAAAGATCACTGCAAGGAGAAGCTTGAGAAGGATCTCAC 660
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CTTGTCCCCGGAGAAGGCAGCTGAATTGAAGCATGTTCTTGCTGTCCTGGATGACCTTTC 720
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 AGCAGATGAACTTGGCGCAAAGATTAAGGAATATGGGATTGTTGCCCCTGATACTAAGAA 780
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CCCGCTCTCTGATCCCTACCCGTTCAATCTTATGTTCCAGACATCCATCGGCCCTACCGG 840
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 TCTTAATGTTGGGTATATGAGACCAGAAACAGCACAGGGTATTTTTGTCAACTTCAAGGA 900
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CTTGTACTATTACAACGGGCAAAAGCTCCCTTTCGCAGCAGCTCAAATCGGGCAAGCATT 960
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CCGTAATGAGATTTCTCCACGACAAGGTCTTCTACGTGTGCGTGAATTCACATTAGCCGA 1020
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GATTGAGCACTTTGTGGATCCTGAGGATAAATCTCACCCAAAATTTGTTGATGTTGCTGA 1080
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 TTTGGAGTTTTTGATGTTTCCAAGAGAGCTGCAACTTTCAGGGGAGTCAGCCAAGTTAGT 1140
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GAAGCTTGGGGAAGCAGTTTCAAAGGGAACTGTTAATAATGAGACACTTGGTTACTTCAT 1200
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 TGGGAGGGTCTATCTTTTCCTAACACGTTTGGGTATTGATAAAAACCGGCTACGCTTCAG 1260
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GCAGCATCTACCTAATGAGATGGCCCATTATGCTGCTGACTGTTGGGATGCAGAGATTGA 1320
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GTGCTCTTACGGATGGATAGAATGTGTGGGCATTGCTGACAGATCTGCGTATGATTTGCG 1380
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 AGCTCATTCTGACAAAAGTGGTGTTCCACTTGTTGCTCATGAAAAATTCTCAAAGCCTAG 1440
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 AGAGGTTGAGAAACTTGTTATAGTGCCCTCAAAGAAAGACCTGGGGCTTGCTTTTAAGGG 1500
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GAACCAAAAGATGGTGGTTGAAGCATTGGAGGCTATGAGTGAGAAAGAAGCAATGGACAT 1560
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GAAAGCTGCTCTTGAATCTAAGGGAGAAACAAATTTCCAAGTGTGTACTCTTGGAAAGGA 1620
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 TGTGGTAATAACCAAGAAAATGGTATCGATCAGTATGGAAAAGAAGTTGGAACACCAACG 1680
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 AGTCTTCACCCCATCAGTCATTGAGCCTTCATTTGGCATTGGGAGGATAATCTACTGTCT 1740
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 ATTTGAGCATTCCTTCTACACAAGACCTAGCAAATCAGAAGAGGAACAACTGAATGTCTT 1800
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 CCGGTTCCCTCCTATTGTTGCTCCTATCAAATGCACTGTGTTCCCCCTGGTGAAGAATCA 1860
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 GGAGTTTGACGACGCTGCGAAAGTTATTGATAAAGCATTAACAACAGCAGGCATCTCGCA 1920
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 TATTATTGACACTACTGCCATTTCTATTGGGAGGAGGTATGCAAGGACAGATGAGATCGG 1980
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 TGTTCCATTCGCGGTAACAGTTGACTCTGCGACAAGCGTGACAATCCGGGAGAGGGACAG 2040
consensus_15183#1 ----------------------------------------------------AGGGACAG 8
********
consensus_15183#0 CAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCAGTGGTGAAACAGCTGACAGA 2100
consensus_15183#1 CAAGGAGCAGATCCGAGTTGGCATCGATGAGGTGGCATCATTGGTGAAACAGCTGACAGA 68
**************************************** *******************
consensus_15183#0 TGGGCAAAGCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCC-CAGG 2159
consensus_15183#1 TGGGCAA-GCACCTGGGCCGATGTTTCATTTAAGTATCCCAGCCATATTGGTCCCACAGG 127
******* *********************************************** ****
consensus_15183#0 GTGATCAGGAGTGAAAATCCTGAACCCTGTTCCAAAGA-AGCACCCCAAATGGCCGTTGA 2218
consensus_15183#1 GTGATCAGGAGTGAAAATCCTGAACCCTGTTCCTAAGATAGCACCCCAA-TGGCCGTTGA 186
********************************* **** ********** **********
consensus_15183#0 TTGAC-TTGAGGAGAAATAGTTCTT--CCTCGTTTC-ATGCAATCT--GGCAAGAACAAA 2272
consensus_15183#1 TTGACCTTGAGGAGAAATAGTTGCTTGCCTCGTTTCCATGGCATGCTGGGCAAGAACAAG 246
***** **************** * ********* *** ** ***********
consensus_15183#0 GTTTGT-CATACACAAATATACAACT-CTTGGACGCCCTT-ACATCTCTC---CATTGTT 2326
consensus_15183#1 TGTTGTGCATGACACAATATACAACTGCTTGGACGCCCTTGACATGCTGCTGCCATTGTT 306
**** *** *********** ************* **** * *******
consensus_15183#0 --CTTTTTGCTCTCTTT--CAAAAGTTT-CACCTGATT--TACATGTTCACAATACAGAA 2379
consensus_15183#1 GCTTTNTTGCTCTGCTTTGCAAAAGTTTGCACCTGGATGTTACATGTTGCACATACAGAA 366
** ******* ** ********* ****** * ******** ********
consensus_15183#0 CATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATT 2439
consensus_15183#1 CATAGCATTTGATTTTCTGCTGAATTCGTCCTGTTAACTTGTAAGGTCGCACCAAGAATT 426
************************************************************
consensus_15183#0 GTTCACCTACCTTCAAAGTTCCAACAAACGAGCTGAAGCTTTGAGTTATTACTTTTCTTA 2499
consensus_15183#1 GTTCACCTACCTTCAA-GTTCCAC--AACGAGCTGAAGCTTTGAGTTATTAAAAAA---- 479
**************** ****** *************************
consensus_15183#0 GACTCTTAAAAAAAATACTCAGATTGTCTTGTCTCTAGTATTGCTTAAGGATTAAGGTGA 2559
consensus_15183#1 ------------------------------------------------------------
consensus_15183#0 ATCTTTTGACTGCCTAAAAAAAA 2582
consensus_15183#1 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||