cluster # 1519

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Oryza sativa
cluster # 1519 cluster # 1519 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1519#0 length = 516 sequences # 2

consensusID : consensus_1519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 516
fasta sequence

                              [CAAGGTGCTCCTTACCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGAGCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGGGTCCCC-AAACCTGGTGCTGATGAC-AAAAATTCTGGAGCTCTCCAGCAAGATTGCCCGAG-AACATGCTGAGAAGAAATCC-AAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAAGCCTGCCATCCATCTTCAGCAGCACAAAGCTTCTCCAAGCTGCTGCTATACACCCATGTGCATGTTGACATCTTGAGTTATTATTGATAGCACTAGTAGTAGTAACAGTAGTAAAGGGCTTGGCTATGCTACGATGCTCTTTCAAGTATTTGCATTGGTCTACATTTGCCGCTGTAACTAAAGCTCCCCACATCTTTTGTGTAGATAGTCCATGCAAGTAAGATTGTTTGGTAATGTCGAGCTGATACTTGCTGATCAAAAAAA]

[+] EMBL BI798743             [CAAGGTGCTCCTTACCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGAGCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGGGTCCCC AAACCTGGTGCTGATGAC AAAAATTCTGGAGCTCTCCAGCAAGATTGCCCGAG AACATGCTGAGAAGAAATCC AAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAAGCCTGCCATCCATCTTCAGCAGCACAAAGCTTCTCCAAGCTGCTGCTATACACCCATGTGCATGTTGACATCTTGAGTTATTATTGATAGCACTAGTAGTAGTAACAGTAGTAAAGGGCTTGGCTATGCTACGATGCTCTTTCAAGTATTTGCATTGGTCTACATTTGCCGCTGTAACTAAAGCTCCCCACATCTTTTGTGTAGATAGTCCATGCAAGTAAGATTGTTTGGTAATGTCGAGCTGATACTTGCTGATCAAAAAAA]
[-] EMBL AI978283             [                                                                                                    TCATCGTCNNNNNAGTCCGNGTCCCCAAAACCTGGTGCTGATGACAAAAAATTCTGNAGCTCTCCAGCAAGATTGCCCGAGNNNAATGCTGAGAAGAAATCCAAAGCANGGANNNAGCCATGGATGCCGTTCATTTGCTGTCACTCGGTGCACTAAGCCTGCCATCCATCTTCAGCAGCACAAAGCTTCTCCAAGCTGCTGCTATACA CCATGTGCATGTTG CATCTTGAGTTATTATTGATAGCACTAGTAGTAGTAACAGTAGTAAAGGGCTTGGCTATGCTACGNTGCTCTTTCTAGTATTTGCATTGGTCTACATTTGCCGCTGTAACTAAAGCTCCCCACATCTTTTGTGTAGATAGTCCATGCAAGTAAGATTGTTTGGTAATGTCGAGCTG                    ]




>consensus_1519#0
CAAGGTGCTCCTTACCGAGGCGAGTGTGGAGACGAAAGAAAAGAAAACCACTGCCAAGGA
GCGTGTTTTGTCATTCAGGCGCCGAGTATCGAAGGACGACTCATCGTCGGCCAAGTCCGG
GTCCCCAAACCTGGTGCTGATGACAAAAATTCTGGAGCTCTCCAGCAAGATTGCCCGAGA
ACATGCTGAGAAGAAATCCAAGCAAGGAAGCAGCCATGGATGCCGTTCATTTGCTGTCAC
TCGGTGCACTAAGCCTGCCATCCATCTTCAGCAGCACAAAGCTTCTCCAAGCTGCTGCTA
TACACCCATGTGCATGTTGACATCTTGAGTTATTATTGATAGCACTAGTAGTAGTAACAG
TAGTAAAGGGCTTGGCTATGCTACGATGCTCTTTCAAGTATTTGCATTGGTCTACATTTG
CCGCTGTAACTAAAGCTCCCCACATCTTTTGTGTAGATAGTCCATGCAAGTAAGATTGTT
TGGTAATGTCGAGCTGATACTTGCTGATCAAAAAAA

clustalw multiple alignements is not computed in this case