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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1805 fasta sequence
[CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC-CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT-TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT-GAATCATGCTATTGCAGATTTTGCCGAGGCATTG-GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC-GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAGCTGGCGGCCTCTGCATCGCCGACGAAGTTCAGGCGGGAGTCGCACGAACTGGAAGCCACTTCTGGGGATTTGAATCGCACGGCGTCATCCCAGACATAGTTACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGT-GATTTCGCAAAAAAAAAA]
[+] EMBL CB646369 [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAA ]
[+] EMBL CB637285 [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGTATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCTAGCAAAGAGGATA ]
[+] EMBL CB638932 [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGANAGTTGTTTTCTTCAC ]
[+] EMBL CB676131 [ CGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAAGAAA ]
[+] EMBL BI305374 [ cttGCGGCCGCCGCCGCGCC CGCGCCGGAG ATGCCTTCGCCGGCGCCCCGAA ATGCCGCCGTTCGACTACACGCCGCCGCCGTACTACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGATCCTCAACCCCTCCCTCTTTCACTTATACGACCGCCCTTTGAACATACTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCAACCGTTTGTGTGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGCTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAANAGTATGCCCGAGATGTTCAGGACATCATTGATTTTGGAACTACANGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGT ]
[+] EMBL CB633455 [ GCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAGCTGGC ]
[+] EMBL AU069783 [ cgGCCACGCGCCGGAGAATNCCTTCGCCGCCGCCCCGAATATACCGCCGTTCGACNACACGCCGCCGCCGTACGACNGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCANCCCCTCCCTCTTCCACTTCTACGANCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTANCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCTGGAATCATGCTATTGCAGATTTTNCCGAGGCATTGNGCA ]
[+] EMBL AK060423 [ ACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAGCTGGCGGCCTCTGCATCGCCGACGAAGTTCAGGCGGGAGTCGCACGAACTGGAAGCCACTTCTGGGGATTTGAATCGCACGGCGTCATCCCAGACATAGTTACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCA ]
[+] EMBL AF251070 [ ACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTG ]
[+] EMBL C26763 [ TTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTTCACCATGCACTTAATCCAGACCCATATAGAG ]
[+] EMBL OSR21171A [ AAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGTTGGCGGAAAAGTATGCCCGAGA ]
[-] EMBL CB646370 [ TACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAGCAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAAg]
[-] EMBL CB633456 [ ACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCCGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATCTGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGCGACTTGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAGACAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAga]
[-] EMBL CB638933 [ AAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAG ]
[-] EMBL CB637286 [ AGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAG ]
[+] EMBL AU031844 [ GGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAAA]
[+] EMBL OS1479A [ AGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGGATTTCGCAAt ]
[+] EMBL AU070708 [ CACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAAA]
[+] EMBL C96879 [ TCCTGCAAACCCNCCATNCGCTGNTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGNCCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTNCATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGNAAATGTTGAAACAATTATATTGGCAAATGNCAGT GATTNCGCAAAAA ]
consensusID : consensus_15256#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 712 fasta sequence
[CCCTCCTAAAGGAATAAGCTTGCGGCCGCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGGCGGCCCAAAATGCCGCCGTTCGACTACACGCCGCCGCCGTACTACGGGCCGCGGGCTGAGGAGATCTTCCCGAAGCGGGCCGAGATCCTTAACCTCTCCCTCTTTCACTTATGCGACCGCCCTTTGAACATACTCGATGGGAAAATGCAATACCTGTTTTACCAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCACCCGTTTGTGTGCGGGCACTGCCATCCGGATGTTGTTGAGGCGGATGGTCAACCAAGCATAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCATATTTTGGCCAGGCATTGGCAGGCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAGCTAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCATGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCGAGATGTTCAGGACATCATTGATTNTGGAACTACAGGAAGGGTCGGTGGT]
[+] EMBL BI305244 [CCCTCCTAAAGGAATAAGCTTGCGGCCGCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGGCGGCCCAAAATGCCGCCGTTCGACTACACGCCGCCGCCGTACTACGGGCCGCGGGCTGAGGAGATCTTCCCGAAGCGGGCCGAGATCCTTAACCTCTCCCTCTTTCACTTATGCGACCGCCCTTTGAACATACTCGATGGGAAAATGCAATACCTGTTTTACCAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCACCCGTTTGTGTGCGGGCACTGCCATCCGGATGTTGTTGAGGCGGATGGTCAACCAAGCATAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCATATTTTGGCCAGGCATTGGCAGGCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAGCTAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCATGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCGAGATGTTCAGGACATCATTGATTNTGGAACTACAGGAAGGGTCGGTGGT]
consensusID : consensus_15256#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence
[CGCCCNACGCGCCCTTCTCCATTGGAGGCGNTGGGACATTTCANTATCCGAAGCTTTGANTCGGAGAGGGACTTGGCAGGATCANCCTGGTCCGCATGTGATCCGTATCCATAAATAATGGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGATTTCGCAATGATGTTGTGCAAAAAAAAAA]
[+] EMBL AU091843 [CGCCCNACGCGCCCTTCTCCATTGGAGGCGNTGGGACATTTCANTATCCGAAGCTTTGANTCGGAGAGGGACTTGGCAGGATCANCCTGGTCCGCATGTGATCCGTATCCATAAATAATGGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGATTTCGCAATGATGTTGTGCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15256#0 CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGG 60
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 CTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCC 120
consensus_15256#1 -------------------------------CCCTCCTAAAGGAATAAGCTT--GCGGCC 27
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 GCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGAC 180
consensus_15256#1 GCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGGCGGCCCAAA-ATGCCGCCGTTCGAC 86
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAG 240
consensus_15256#1 TACACGCCGCCGCCGTACTACGGGCCGCGGGCTGAGGAGATCTTCCCGAAGCGGGCCGAG 146
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAA 300
consensus_15256#1 ATCCTTAACCTCTCCCTCTTTCACTTATGCGACCGCCCTTTGAACATACTCGATGGGAAA 206
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 ATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCA 360
consensus_15256#1 ATGCAATACCTGTTTTACCAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCA 266
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 ACCGTTTGT-TGCGGGCACTGC-CATCCGGATGTTGTTGAGGCG-ATGGTCAACCAAGCA 417
consensus_15256#1 CCCGTTTGTGTGCGGGCACTGC-CATCCGGATGTTGTTGAGGCGGATGGTCAACCAAGCA 325
consensus_15256#2 --------------CGCCCNACGCGCCCTTCTCCATTGGAGGCGNTGGGACATTTCANTA 46
** * * * ** * * ****** ** ** * *
consensus_15256#0 AAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCAGATTTTGCCGAG 477
consensus_15256#1 TAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCATATTTTGGCCAG 385
consensus_15256#2 TCCGAAGCTTTGANTCGGAGAGGGACTTGGCAGGATCANCCTGGTCCGCATGTGATCC-- 104
* ** ** * * **** ** * * ** * *
consensus_15256#0 GCATTGGCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACG 537
consensus_15256#1 GCATTGGCAGGCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACG 445
consensus_15256#2 GTATCCATAA--ATAATGGTTGGGGATTGGTGAGATAGCACCT---CGTTGTCTCGTAAT 159
* ** * * **** *** *** * * * ** * *** * *
consensus_15256#0 GAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCAT-GACATTAT 596
consensus_15256#1 GAGGCGAGCTAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCAT-GACATTAT 504
consensus_15256#2 ATGTCCTGCAAACC--CACCA-----TGCGCTGCTCAACACATGGTCCAATAGGCGCTCC 212
* * * * * *** *** * *** **** * * * ** * * *
consensus_15256#0 TTCACTCAGGAAT-GGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAAT 655
consensus_15256#1 TTCGCTCATGAAT-GGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAAT 563
consensus_15256#2 TCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGAT 272
* * ** *** *** * ** * * * * * ** * * **
consensus_15256#0 GCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCAT 715
consensus_15256#1 GCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCAT 623
consensus_15256#2 GTATTGTTATAGTTATTGTT-TACATGCTGAACGACAAAACGAACCAATCACA-----AT 326
* * * * *** **** * ** * * * ** * * ** * ** **
consensus_15256#0 ATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCG-AGATGTTCAGGAAATCAT- 773
consensus_15256#1 ATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCG-AGATGTTCAGGACATCAT- 681
consensus_15256#2 GCCCAGGCGATGTAAATGTTGA----AACAATTATATTGGCAAATGTCAGTGATTTCGCA 382
*** * * * * *** * ** *** * * **** ** **
consensus_15256#0 -TGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGG 832
consensus_15256#1 -TGATTNTGGAACTACAGGAAGGGTCGGTGGT---------------------------- 712
consensus_15256#2 ATGATGTTGTGCAAAAAAAAAA-------------------------------------- 404
**** ** * * **
consensus_15256#0 GTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAG 892
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 CTGGCGGCCTCTGCATCGCCGACGAAGTTCAGGCGGGAGTCGCACGAACTGGAAGCCACT 952
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TCTGGGGATTTGAATCGCACGGCGTCATCCCAGACATAGTTACAATGGCAAAGGGTATAG 1012
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 GCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCC 1072
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 GCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTG 1132
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACC 1192
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGA 1252
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 AAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAG 1312
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTG 1372
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 GTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCG 1432
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 ATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGG 1492
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 CAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGAT 1552
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 AGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGT 1612
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 CCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCA 1672
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 TGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCA 1732
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 ATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGATTT 1792
consensus_15256#1 ------------------------------------------------------------
consensus_15256#2 ------------------------------------------------------------
consensus_15256#0 CGCAAAAAAAAAA 1805
consensus_15256#1 -------------
consensus_15256#2 -------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||