These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1465 fasta sequence [CCGCCCCCTGATCCGCGA-GCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTC-TTCCACGACTGC-TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCAGAGAAGC-TGAGCGCGCCGAACAACCCGTCCATGC-GGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTAC-AAGAACGTGCTCGACCACAAGGTGCTC-TT-CACC-TCTGACGCGGC-GCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCC--GGGTGGTGGGAGGACAGGTTCAAGGCGGCCAT-GGTGAAGTTGGCGAGCATCCA-GGTGAAGACCGGGTACCA-GGGGCAGAT-CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT-GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATATATTGATGTTTATAAGAAATTTGAAAAAA] [+] EMBL OSS2372A [CCGCCCACGCGTCCGCGA GCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGC ] [+] EMBL AK120411 [ CCTGATCATCGA GCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTC TTCCACGACTGC TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCAGAGAAGC TGAGCGCGCCGAACAACCCGTCCATGC GGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTAC AAGAACGTGCTCGACCACAAGGTGCTC TT CACC TCTGACGCGGC GCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCC GGGTGGTGGGAGGACAGGTTCAAGGCGGCCAT GGTGAAGTTGGCGAGCATCCA GGTGAAGACCGGGTACCA GGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTA ] [+] EMBL AK099751 [ CCTGATCATCGA GCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTC TTCCACGACTGC TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCAGAGAAGC TGAGCGCGCCGAACAACCCGTCCATGC GGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTAC AAGAACGTGCTCGACCACAAGGTGCTC TT CACC TCTGACGCGGC GCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCC GGGTGGTGGGAGGACAGGTTCAAGGCGGCCAT GGTGAAGTTGGCGAGCATCCA GGTGAAGACCGGGTACCA GGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTA ] [+] EMBL OSR16061A [ CCGCGA GCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGTCAGAACCCCGGCAATNGCGCCGCCGTCATNCGNATGNTN TTACACGACTGC TTTGTNGAGGGTTGT ] [+] EMBL AU032308 [ ntncCGATGCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCNAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCNCCCAGGCCGAGG ] [+] EMBL AU065457 [ CTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACNCCGGCAATGGCGCCG CGTCATCCGCATGCTC TTCCACGACTGCTTTTGTCGANGGTTGTGATGCTTCGATCCTCCTGGACCCGANGGCGTTCAAn ] [+] EMBL AU065429 [ CTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGTTTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTCTTTCCACGACTGC TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGANCCGACGGCGTTNAACCCGACGGCAGAGAAGCTTAAGCGNGCC ] [+] EMBL OSR14201A [ CTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCANGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGNATGCTC TTCCACGACTGT TTTGTCGAGGGTTGTGATG ] [+] EMBL CA754869 [ TCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTC TTCCACGACTGC TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCCGAGAAGC TGAGCGCGCCGAACAACCCGTCCATGC GGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACNTCATCGCCTTCGCGGCGCGCGACGCCCCCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGGACTTCTCC ACGACTCCG ] [+] EMBL CA754816 [ TCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGA ] [+] EMBL OSS11107A [ GCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGGTC TTCCACGACTGC TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGGCGTTCAACCCGACGGCAGAGAAGC TGAGCGCGCCGAACAACCCGTCCATGCGGGGGCTTCG ] [+] EMBL CB656627 [ GCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTC TTCCACGACTGC TTTGTCGAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCAGAGAAGC TGAGCGCGCCGAACAACCCGTCCATGC GGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTAC AAGAACGTGCTCGACCACAAGGTGCTC TT CACC TCTGACGCGGC GCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGAC ] [-] EMBL CB656628 [ TCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTAC AAGAACGTGCTCGACCACAAGGTGCTC TT CACC TCTGACGCGGC GCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCC GGGTGGTGGGAGGACAGGTTCAAGGCGGCCAT GGTGAAGTTGGCGAGCATCCA GGTGAAGATCGGGTACCA GGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATATATTGATGTTTAT ] [+] EMBL AU032309 [ CTGGACAACCAGTACTACAAAGAACNTGCTCGACCACAAGGTGCTCNTTCCACCTTCTGACGCGGCTGCTCCTGACNTCGCCGGAGACGGCGAAGATGNTGGTGGACAACGCCGTCATCCCCCGGGGTGGTGGGAGGACAGGTTCAAGGCGGCCATNGGTGAAGTTGGCGAGCATCCAGGGTGAAGACCGGGTACCAGGGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCTGGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAAAAA ] [+] EMBL AU184741 [ GTCATCCCC GGGTGGTGGGAGGACAGGTTCAAGGCGGCCAT GGTGAAGTTGGCGAGCATCCA GGTGAAGACCGGGTACCA GGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAaaa ] [+] EMBL AU184800 [ GGTGGGAGGACAGGTTCAAGGCGGCCAT GGTGAAGTTGGCGAGCATCCA GGTGAAGACCGGGTACCA GGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATATATTGATGTTAAAAA ] [+] EMBL C20486 [ AGCCGGCCAT GGTGAAGTTGGCGAGCATCCA GTTGAAGACCGGGTACCA GGGGCAGAT CAGGAAGAACTGCAGGGTCATCAACTACTGATTAANCTACAAGTTTAGCTGCGTNATTCAATTACCT GGTNAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAANCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCANATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGNATAATTGTAAGTTAAGTTTTTTGCAACAAaa ] [+] EMBL AU031744 [ AGTTGNCGAGCATCCA GGTGAAGNCCGGGTACCA GGGGCAGATCCAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCT GGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATATATTGATGTTTATCTGAAATTTGAAAAAA] [+] EMBL AU032399 [ TTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATATATTGATGTTAAAAA ] consensusID : consensus_15282#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 497 fasta sequence [GACGGCGAAGATGGTGGTGGACAAACCCGTTCATCCCCGGGGTGGTGGGAGGACAGGTTCAAGGCGCCCATGGTGAAAGTNGGCGAGCATTCCAGGTGAAGACCGGGTACCAGGGGCAGATCAGGAAGAACTGCAGGTTCATCAANTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCTGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGNGCCCGCTATATGNCNGATGTTTATNTAAGGGCCATAAAAA] [+] EMBL C20508 [GACGGCGAAGATGGTGGTGGACAAACCCGTTCATCCCCGGGGTGGTGGGAGGACAGGTTCAAGGCGCCCATGGTGAAAGTNGGCGAGCATTCCAGGTGAAGACCGGGTACCAGGGGCAGATCAGGAAGAACTGCAGGTTCATCAANTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCTGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGNGCCCGCTATATGNCNGATGTTTATNTAAGGGCCATAAAAA] consensusID : consensus_15282#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence [ACGGTTTGANAGTTTCANACCCNCCTTGANCAANNCGNAANCGTACNTGTTGATGATGTTATNATTGGATGTGNCTTTTGCTTCACATTTATGNTCCCCCNCTTTTGTTACCATTCCTTAANTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGNCCTAATTGTGTAATAAGGNNATATGTACTTGGNANAANTGTNAGTTAAGTTTTTTGCAANAAGTNNNNNCTATAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C20527 [ACGGTTTGANAGTTTCANACCCNCCTTGANCAANNCGNAANCGTACNTGTTGATGATGTTATNATTGGATGTGNCTTTTGCTTCACATTTATGNTCCCCCNCTTTTGTTACCATTCCTTAANTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGNCCTAATTGTGTAATAAGGNNATATGTACTTGGNANAANTGTNAGTTAAGTTTTTTGCAANAAGTNNNNNCTATAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15282#0 CCGCCCCCTGATCCGCGAGCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATT 60 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 AGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAG 120 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 CCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCG 180 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 TGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCC 240 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 CCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCA 300 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 ATGGCGCCGCCGTCATCCGCATGCTCTTCCACGACTGCTTTGTCGAGGGTTGTGATGCTT 360 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 CGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCAGAGAAGCTGAGCGCGCCGAACA 420 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 ACCCGTCCATGCGGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGT 480 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 GCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACT 540 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 TCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCT 600 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 CCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCG 660 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 TCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCC 720 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 ACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCT 780 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 TCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGA 840 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 CGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACA 900 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 ACCAGTACTACAAGAACGTGCTCGACCACAAGGTGCTCTTCACCTCTGACGCGGCGCTCC 960 consensus_15282#1 ------------------------------------------------------------ consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 TGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGT-CATCCCCGGG-TGGTG 1018 consensus_15282#1 -------------GACGGCGAAGATGGTGGTGGACAAACCCGTTCATCCCCGGGGTGGTG 47 consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 GGAGGACAGGTTCAAGGCGGCCATGGTGAA-GTTGGCGAGCAT-CCAGGTGAAGACCGGG 1076 consensus_15282#1 GGAGGACAGGTTCAAGGCGCCCATGGTGAAAGTNGGCGAGCATTCCAGGTGAAGACCGGG 107 consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 TACCAGGGGCAGATCAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTT 1136 consensus_15282#1 TACCAGGGGCAGATCAGGAAGAACTGCAGGTTCATCAANTACTGATTAATCTACAAGTTT 167 consensus_15282#2 ------------------------------------------------------------ consensus_15282#0 AGCTGCGTGATTCAATTACCTGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTT 1196 consensus_15282#1 AGCTGCGTGATTCAATTACCTGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTT 227 consensus_15282#2 -----------------------------------------------------ACGGTTT 7 ******* consensus_15282#0 GATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTG 1256 consensus_15282#1 GATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTG 287 consensus_15282#2 GANAGTTTCANACCCNCCTTGANCAANNCGNAANCGTACNTGTTGATGATGTTATNATTG 67 ** ******* **** ****** *** ** ** ***** *************** **** consensus_15282#0 GATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTC 1316 consensus_15282#1 GATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTC 347 consensus_15282#2 GATGTGNCTTTTGCTTCACATTTATGNTCCCCCNCTTTTGTTACCATTCCTTAANTCCTC 127 ****** ******************* ** *** ******************** ***** consensus_15282#0 ATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAAT 1376 consensus_15282#1 ATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAAT 407 consensus_15282#2 ATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGNCCTAATTGTGTAAT 187 ********************************************* ************** consensus_15282#0 AAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATA 1436 consensus_15282#1 AAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGNGCCCGCTATA 467 consensus_15282#2 AAGGNNATATGTACTTGGNANAANTGTNAGTTAAGTTTTTTGCAANAAGTNNNNNCTATA 247 **** ************ * ** *** ***************** *** ***** consensus_15282#0 TAT-TGATGTTTATAAGAAATTTGAAAAAA 1465 consensus_15282#1 TGNCNGATGTTTATNTAAGGGCCATAAAAA 497 consensus_15282#2 AAAAAAA-----AAAAAAAAAAAAAAAAA- 271 * * * **** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||