These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15286#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1635 fasta sequence [CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTCGTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA-GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC-GGCGGCGGCTTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCCGAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGCGAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAATCTGAAAAAAAAAAAAAAAA] [+] EMBL OSS14470A [CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTCGTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTNCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCAAGAGACTCCCAAGATCCAGAG CCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCG ACGCCAAGGAGGTTGAGGCGAT CGGTTGa ] [+] EMBL AK106265 [ TATTCGTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCCGAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGCGAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACT ] [+] EMBL AK072305 [ AGCTTGTTCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCCGAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGCGAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCACAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAA ] [+] EMBL AU056755 [ TAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAA CCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGAGGGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGCGGGCGGCGGCTTCGGCCGC ] [+] EMBL CB638733 [ ATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCGGCCGCGTCTAC ] [+] EMBL CB640646 [ CCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGG ] [+] EMBL CB640642 [ CCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCG ] [+] EMBL OSS2168A [ ccgCTTTTTTGGCAGTNATTATCTNTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCANNAGACTC ] [+] EMBL OSR10352B [ GATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCG GGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAG TGTCGGACTTCGGGCTGGCGAAGGACGNGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGG ] [+] EMBL CA756388 [ CGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGNGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCNAGGCGAGGCCGCTCAT ] [-] EMBL CB679511 [ atcattcAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGACGAGGGAAGATGATTAATTAATTAATTAATTACTT ] [+] EMBL CB679510 [ GGAGTCCTACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAA ] [+] EMBL AU222681 [ CGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCG ] [+] EMBL CB658007 [ CCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACT ] [+] EMBL AU174251 [ GCGGTGCACAAGGCGGCGATGCTGGCGTACCNCTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAA ] [+] EMBL C22647 [ CGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATNGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACNCCGCCGGCNCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAATTTTCTGAAAAAAAAAAAAAAAA] [+] EMBL C22582 [ ccaACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGNCGAGGCGCGCGACNCCGCCGGCGCCTGAGAAGAAGGGNGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTNGTGCAGCAAGGGGGTAGGTGTNGTGATTAGCGGTTGAGTTGAGCTGNGNGTACGAACGTTGTTNATGTGCNGGGNNGATGATTAATTAATTAATTAATTACTT NATTTTAAAAAAAAAAAA ] [+] EMBL CB621853 [ AGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGTTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAA ] consensusID : consensus_15286#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 464 fasta sequence [TCGCTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTCCTCCCCCCCAAGGGCAAGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCCGCCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGGTACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGGAAAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT] [-] EMBL CB638734 [TCGCTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTCCTCCCCCCCAAGGGCAAGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCCGCCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGGTACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGGAAAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT] [-] EMBL CA764002 [ GTGATTAGCGGTTGAGTTGAGTTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATT ] consensusID : consensus_15286#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 305 fasta sequence [TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATCGCTGACATATTCTGCGCCTTTTCTCTTTCTATTCATTTCTTTATTTCACTTCCCATCTTTTCTTTCTCTTCTCTAATTCTGCAATCGCA] [+] EMBL BE040581 [TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATCGCTGACATATTCTGCGCCTTTTCTCTTTCTATTCATTTCTTTATTTCACTTCCCATCTTTTCTTTCTCTTCTCTAATTCTGCAATCGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15286#0 CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTC 60 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTT 120 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTC 180 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 TCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTC 240 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 TTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGG 300 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 TTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAG 360 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 ATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAG 420 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTC 480 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GAGGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGCGGCGGCGGC 540 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 TTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCC 600 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGC 660 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTC 720 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGC 780 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 AGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATG 840 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 AAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTC 900 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 ATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTG 960 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 TCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGG 1020 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 ATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCC 1080 consensus_15286#1 ------------------------------------------------------------ consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 ATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCG 1140 consensus_15286#1 ---------------------------------------------------------TCG 3 consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 CTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTC 1200 consensus_15286#1 CTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTCCTC 63 consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 ACCCACAAGCGCA--AGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCG 1258 consensus_15286#1 CCCCCCAAGGGCA--AGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCCG 121 consensus_15286#2 ----TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAAT- 55 ** ** ** * *** ** * *** * * * ** * consensus_15286#0 CCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGT 1318 consensus_15286#1 CCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGGT 181 consensus_15286#2 CCAGGGATACACAGAGATATCGCCCT------------TTTTTGGCAGTGATTATCTCTC 103 ** * ** * * * ** *** * *** * consensus_15286#0 ACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGC 1378 consensus_15286#1 ACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCGC 241 consensus_15286#2 TCTCTAGCTTGGTTGAGAG---AGAAGAACAGCAGCTCTTGCTTG-CCTCCTTACTTTCT 159 * ** ** ** * * ** * ** *** * * * * * consensus_15286#0 TCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGA 1438 consensus_15286#1 TCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGGA 301 consensus_15286#2 TCTTGGTGTTCTTGG---AGAGAGAGGGAGAGGA-----TTAGAGGTTGTGATAGATGGG 211 ** * * * ** * **** ** * * ** * * ** consensus_15286#0 GAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAA 1498 consensus_15286#1 AAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAA 361 consensus_15286#2 TAATCGCTGACATATTCTGCGCCTTTTCTCTTTCTATTCATTTCTTTATTTCACTTCCCA 271 * * * ** ** * * ** * ** * * ** * ** * * * consensus_15286#0 GATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGT 1558 consensus_15286#1 GATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGT 421 consensus_15286#2 TCTTTTCTTTCTCTTCTCTAATTCTGCAATCGCA-------------------------- 305 *** * * * * * * consensus_15286#0 ACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAATCT 1618 consensus_15286#1 ACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT----------------- 464 consensus_15286#2 ------------------------------------------------------------ consensus_15286#0 GAAAAAAAAAAAAAAAA 1635 consensus_15286#1 ----------------- consensus_15286#2 ----------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||