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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15290#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1925 fasta sequence
[TTTCTTTTCCATTTCCTCCTCTCCTCTTCCCCCCTTTGGCTTGGGGCTTGGCTTGGCGCCTCCTCCAATCGAGCAGGTTTCCCCAAATCTTAGGGTTAGGGTTTCGTCTATTCGTTGCCTTCCTCGCCGGATTAGCGCGTCCAGGGAGGGTGAGCGGGGTGTGCTTGGTCGCGTCGCGTCGTGCCGTGCCGTGCCGCGCGTGGGATGATGGGCACCGCCGTGGAGCTCGGCCGGAGGCACGGCGGCGACCACCGCTTCTACGACGCATCCAGGGTCCGGCGAGGGTACCACCACCACGGGCTCCCCAAGGCGAGGTGGGCCCCCGCCGTCCACCAGGAGAAGGCGGCCGAGGAGCCGTCCCCGTCGCCGGCGAGGGCGCCGGTCCCGCCCCCCGGCGTCGCGGGCAACCTTGAGCGGTTCGTGGCCGCCGTGACGCCGTTCGTGCCTGCTCAGTTCCCCTCCAAGATGCAGAGAGCCGCGAGGGGGTGGCGGGGCTGCGGCGTGGATGCCGAGCGGGAGGAGGCCCCGCACTTCTTCCTCAGAGACGTGTGGGAGGCGTACAGGGAGTGGAGTGCGTACGGTGCCGGTGTGCCGCTTGTCCTCGATGGCTGCGACGGGGTCGTGCAGTATTACGTGCCGTACTTGTCCGCCATCCAGCTCTATGGAGACCCCGCAGTCCTGCGACTGTCTTCTGGCCCTAGACATATAATGGATGACAGTGATGGGGAGTATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCAGGACTGAGGACCCTTAGAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT-AAAATACTGGGGTC-CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG-CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACG-CCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACA-CCGAAGGGGGAGGTGAA-TGGCT-GATAGCTTTCACACATGCAAGCGGAGAGACGGTGTGAGC-TCCCATAGTAGGATGCAAGCA-GTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCT-CCTGAGGGAAGTTGAGATGAAAAGTG-AAAAAAAAAGCAAAAAAGGA-CTGAAGAAAAAG-GCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCCTGTCTGACACTACAGACTGTTGTGTTTGAAGGGAACTTGTAGTTAGCAAATTAGAGTCATCCGCATCGTTTGTTCTATAGAATATAATGTTGATACTAATCATGTCTAGACTTGCAATGCACAAATTAAGAGCTGCTGATGCGTGTAAACAGTCTGATGTTCATTAGTCAAATTACC]
[+] EMBL AK069619 [TTTCTTTTCCATTTCCTCCTCTCCTCTTCCCCCCTTTGGCTTGGGGCTTGGCTTGGCGCCTCCTCCAATCGAGCAGGTTTCCCCAAATCTTAGGGTTAGGGTTTCGTCTATTCGTTGCCTTCCTCGCCGGATTAGCGCGTCCAGGGAGGGTGAGCGGGGTGTGCTTGGTCGCGTCGCGTCGTGCCGTGCCGTGCCGCGCGTGGGATGATGGGCACCGCCGTGGAGCTCGGCCGGAGGCACGGCGGCGACCACCGCTTCTACGACGCATCCAGGGTCCGGCGAGGGTACCACCACCACGGGCTCCCCAAGGCGAGGTGGGCCCCCGCCGTCCACCAGGAGAAGGCGGCCGAGGAGCCGTCCCCGTCGCCGGCGAGGGCGCCGGTCCCGCCCCCCGGCGTCGCGGGCAACCTTGAGCGGTTCGTGGCCGCCGTGACGCCGTTCGTGCCTGCTCAGTTCCCCTCCAAGATGCAGAGAGCCGCGAGGGGGTGGCGGGGCTGCGGCGTGGATGCCGAGCGGGAGGAGGCCCCGCACTTCTTCCTCAGAGACGTGTGGGAGGCGTACAGGGAGTGGAGTGCGTACGGTGCCGGTGTGCCGCTTGTCCTCGATGGCTGCGACGGGGTCGTGCAGTATTACGTGCCGTACTTGTCCGCCATCCAGCTCTATGGAGACCCCGCAGTCCTGCGACTGTCTTCTGGCCCTAGACATATAATGGATGACAGTGATGGGGAGTATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCAGGACTGAGGACCCTTAGAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACG CCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACA CCGAAGGGGGAGGTGAA TGGCT GATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAAGCA GTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCT CCTGAGGGAAGTTGAGATGAAAAGTG AAAAAAAAAGCAAAAAAGGA CTGAAGAAAAAG GCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCCTGTCTGACACTACAGACTGTTGTGTTTGAAGGGAACTTGTAGTTAGCAAATTAGAGTCATCCGCATCGTTTGTTCTATAGAATATAATGTTGATACTAATCATGTCTAGACTTGCAATGCACAAATTAAGAGCTGCTGATGCGT ]
[+] EMBL CB618977 [ TCTTCCCCCCTTTGGCTTGGGGCTTGGCTTGGCGCCTCCTCCAATCGAGCAGGTTTCCCCAAATCTTAGGGTTAGGGTTTCGTCTATTCGTTGCCTTCCTCGCCTGATTAGCGCGTCCAGGGAGGGTGAGCGGGGTGTGCTTGGTCGCGTCGCGTCGTGCCGTGCCGTGCCGCGCGTGGGATGATGGGCACCGCCGTGGAGCTCGGCCGGAGGCACGGCGGCGACCACCGCTTCTACGACGCATCCAGGGTCCGGCGAGGGTACCACCACCACGGGCTCCCCAAGGCGAGGTGGGCCCCCGCCGTCCACCAGGAGAAGGCGGCCGAGGAGCCGTCCCCGTCGCCGGCGAGGGCGCCGGTCCCGCCCCCCGGCGTCGCGGGCAACCTTGAGCGGTTCGTGGCCGCCGTGACGCCGTTCGTGCCTGCTCAGTTCCCCTCCAAGATGCAGAGAGCCGCGAGGGGGTGGCGGGGCTGCGGCGTGGATGCCGAGCGGGAGGAGGCCCCGCACTTCTTCCTCAGAGACGTGTGGGAGGCGTACAGGGAGTGGAGTGCGTACGGTGCCGGTGTGCCGCTTGTCCTCGATGGCTGCGACGGGGTCGTGCAGTATTACGTGCCGTACTTGTCCGCCATCCAGCTCTATGGAGACCCCGCAGTCCTGCGACTGTCTTCTGGCCCTAGACATATAATGGATGACAGTGATGGGGAGTATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTG ]
[+] EMBL CB644177 [ catatcTGGGATGATGGGCACCGCCGTGGAGCTCGGCCGGAGGCACGGCGGCGACCACCGCTTCTACGACGCATCCAGGGTCCGGCGAGGGTACCACCACCACGGGCTCCCCAAGGCGAGGTGGGCCCCCGCCGTCCACCAGGAGAAGGCGGCCGAGGAGCCGTCCCCGTCGCCGGCGAGGGCGCCGGTCCCGCCCCCCGGCGTCGCGGGCAACCTTGAGCGGTTCGTGGCCGCCGTGACGCCGTTCGTGCCTGCTCAGTTCCCCTCCAAGATGCAGAGAGCCGCGAGGGGGTGGCGGGGCTGCGGCGTGGATGCCGAGCGGGAGGAGGCCCCGCACTTCTTCCTCAGAGACGTGTGGGAGGCGTACAGGGAGTGGAGTGCGTACGGTGCCGGTGTGCCGCTTGTCCTCGATGGCTGCGACGGGGTCGTGCAGTATTACGTGCCGTACTTGTCCGCCATCCAGCTCTATGGAGACCCCGCAGTCCTGCGACTGTCTTCTGGCCCTAGACATATAATGGATGACAGTGATGGGGAGTATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTNCAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATA CTTGAGTTTGATTC ]
[+] EMBL CB678251 [ TCCTCATAGACGTGTGGGAGGCGTACAGGGAGTGGAGTGCGTACGGTGCCGGTGTGCCGCTTGTCCTCGATGGCTGCGACGGGGTCGTGCAGTATTACGTGCCGTACTTGTCCGCCATCCAGCTCTATGGAGACCCCGCAGTCCTGCGACTGTCTTCTGGCCCTAGACATATAATGGATGACAGTGATGGGGAGTATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCAGGACTGAGGACCCTTAGAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTC ]
[+] EMBL CF308650 [ gcATGACAGTGATGGGGAGTATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCAGGACTGAGGACCCTTAGAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCAT CAACAGGTAGTGGCACGGAGTCTACG CCTTGGCAG ]
[+] EMBL CF308281 [ ATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCAGGACTGAGGACCCTTAGAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCC ]
[+] EMBL CF314106 [ ATCATGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCAGGACTGAGGACCCTTAGAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGGCTGGCTG CGGGATAGTCGT ]
[-] EMBL CB618978 [ TTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCAACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGTCACGGAGTCTACG CCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACA CCGAAGGGGGAGGTGAA TGGCT GATAGCTTTCACACATGCAAGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAAGCA GTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCT CCTGAGGGAAGTTGAGATGAAAAGTGAAAAAAAAAAGCAAAAAAGGA CTGAAGAAAAAG GCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCCTGTC ]
[-] EMBL CF314107 [ ACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGGCTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACGGGTAGTGGCACGGAGTTTACG CCTTGGCAGAATTTGCAGCAGAATGTTTGGAAGGTTTCAGCTGTAAATACA CCGAAGGGGGAGGTGAA TGGCT GATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAAGCA GTGTTTTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTAAGATTAATAGTCGGTGATCCT CCTGAGGGAAGTTGAGATGAAAAACA CAAAAAAAAGCCAAAAAGGT CTGAAGAAAAAG GCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGAaaaaaa ]
[+] EMBL BQ909085 [ ATCCCTACTGGCCC ACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGT AAAATACTGGGGTC CTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCAACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCCGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGTCACGGAGTCTACGCCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCCGAAGGGGGAGGTGAACTGGCTCGATAGCTTTCACACATGCAAGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAAGCA GTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCT CCTGAGGGAAGTTGAGATGAAAAGTG AAAAAAAAAa ]
[+] EMBL BI812783 [ AAGATACCGGTGGTGCTGTAAAAATACT GGGTCTCTGGTACCAAACCGACTATACCACTATCTGTTTTT GTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCAACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGTCACGGAGTCTACG CCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACA CCGAAGGGGGAGGTGAA TGGCT GATAGCTTTCACACATGCAAGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAAGCA GTGTTCTGCTTTGTAAAT GCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCT CCTGAGGGAAGTTGAGATGAAAAGTG AAAAAA ]
[-] EMBL CB678252 [ ATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTG CGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACG CCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACA CCGAAGGGGGAGGTGAA TGGCT GATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAAGCA GTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCT CCTGAGGGAAGTTGAGATGAAAAGTG AAAAAAAAAGCAAAAAAGGA CTGAAGAAAAAG GCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCCTGTCTGACACTACAGACTGTTGTGTTTGAAGGGAACTTGTAGTTAGCAAATTAGAGTCATCCGCATCGTTTGTTCTATAGAATATAATGTTGATACTAATCATGTCTAGACTTGCAATGCACAAATTAAGAGCTGCTGATGCGTGTAAACAGTCTGATGTTCATTAGTCAAATTACC]
[+] EMBL BM419158 [ ccGTGAA TGGCT GATAGCTTTCACACATGCAAGCGGAGAGACGGTGTGAGC TCCCATAGTAGGATGCAA CA GTGTTCTGCTTTGTAAAT GCGGTAATAGGGGA GGTTTGATC GCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCCCGAGGGAAGTTGAGATGAAAAGTG AAAAAAAA ]
[+] EMBL BI812681 [ CGGTGTGAGCGTCCCATAGTAGGAT CAAGCACGTGTTCTGCTTTGTAAAT GCGGTAATAGGGGAGGGTTTGATC GCTGTGTTTTTATGCTTAATAGTCGGTGATCCT CCTGAGGGAATTTGAGATGAAAAGTGAAAAAAAAAAGCCAAAAAGGACCTGAAGAAAAAGCGCAGTAAAAAGATTA CTGTGCTT TTT TTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCCTGTCTGACACTACAGACTGTTGTGTTTGAAGGGAACTTGTAGTTAGCCAATTAGAGTCATCCGCATCGTTTGTTCTATAGAATATAATGTTGATACTAAaaaa ]
[+] EMBL CF334465 [ AGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAAaaa ]
[-] EMBL CF334464 [ GATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAAaaaa ]
consensusID : consensus_15290#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 801 fasta sequence
[CTTATTGCTTGCTTGTGTTGTGATCTCAAGTTTTTATGCTCTCTTGGCCAGATAACGGTGGTGCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACGCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCGAAGGGGGAGGTGAATGGCTGATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGCTCCCATAGTAGGATGCAAGCAGTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTTGAGATGAAAAGTGAAAAAAAAAGCAAAAAAGGACTGAAGAAAAAGGCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTAAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAG-CCTGTC-TGAC-ACTA-CAGA-C-TGT-TGTGTTTGAAGGGAA-CTTGTAGTTAGCAAATTAGAGTCAAAAAAAAAAAAAAAAAAAAAAAAACAC]
[-] EMBL CF313882 [CTTATTGCTTGCTTGTGTTGTGATCTCAAGTTTTTATGCTCTCTTGGCCAGATAACGGTGGTGCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTATACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGGGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACGCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCGAAGGGGGAGGTGAATGGCTGATAGCTTTCACACAAGCATGCGGAGAGACGGTGTGAGCTCCCATAGTAGGATGCAAACAGTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTTGAGATGAAAAGGGAAAAA ]
[-] EMBL CF308282 [ GGATAGTCGTACCAGCCATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACGCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCGAAGGGGGAGGTGAATGGCTGATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGTTCCCATAGTAGGATGCAAGCAGTGTTCTGCTTTGTAAATGGTGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTT GATGAAAAGTGAAAAAAAAAGCAAAAAAGGTCTGAAGAAAAAGGCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTAAAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTAATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCCCTGTCATGACGACTAGCAGACC TGTATGTGTTTGAAGGGAAGCTTGTAGTTAGCAAATTAGAGTCAAAAAAAAAAA ]
[-] EMBL CF308651 [ CCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTACGCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCGAAGGGGGAGGTGAATGGCTGATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGCTCCCATAGTAGGATGCAAGCAGTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTT GATGAAAAGTGAAAAAAAAAGCAAAAAAGGACTGAAGAAAAAGGCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTAAAAAAACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAG CCTGTC TGAC ACTA CAGA C TGT TGTGTTTGAAGGGAA CTTGTAGTTAGCAAATTAGAGTCAAAAAAAAAAAAAAAAAAAAAAAAACAC]
[-] EMBL CF330923 [ TTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTTTACGCCTTGGCAGAATTTGCAGCAGAATGTTTGGAAGGTTTCAGCTGTAAATACACCGAAGGGGGAGGTGAATGGTTGATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGCTCCCGTAGTAGGATGCAAGCAGTGTTTTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGGCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTTGAGATGAAAAGTGAAAAAAAAAGCAAAAAAGGACTGAAGAAAAAGGCAGTAAAAAGATTAGCTGTGCTTGTTTGTTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACGAATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAG CCTGTT TGAC ACTA CAGA CTTGT TGTGTTTGAAGGGAA CTTGTAGTTAGCAAA AAA AAAAAAAAAAAA ]
consensusID : consensus_15290#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[TACGTACCGGCATGACAGTGATGGGGAGTTTTTTGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCATGACTGAGGACCCTTAAAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTAACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGG]
[+] EMBL CF330924 [TACGTACCGGCATGACAGTGATGGGGAGTTTTTTGATTCCAGCAGTGATGCAAGTAGTGATTATGAACTTGGAAGAGTAAAACATCTAACTCAGGAAGGCTTCTCAAGTGATGATGGTGAATCAGGAGATTTGCATGGCCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAACCATTGACTGATAAGATTTCCAGTCTTTCAGCAAGATTTCCATGACTGAGGACCCTTAAAAGCTGTGATTTATCACCGCGAAGTTGGATATCTGTTGCTTGGTATCCAATTTACCGTATCCCTACTGGCCCAACATTAAAAGATTTGGATGCATGCTTTCTCACCTTCCATCGGCTATCAACTGGGCCAGAAGAAGATAACGGTGGTGCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTAACCACTATCTGTTTTTGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCAGCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15290#0 TTTCTTTTCCATTTCCTCCTCTCCTCTTCCCCCCTTTGGCTTGGGGCTTGGCTTGGCGCC 60
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 TCCTCCAATCGAGCAGGTTTCCCCAAATCTTAGGGTTAGGGTTTCGTCTATTCGTTGCCT 120
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 TCCTCGCCGGATTAGCGCGTCCAGGGAGGGTGAGCGGGGTGTGCTTGGTCGCGTCGCGTC 180
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 GTGCCGTGCCGTGCCGCGCGTGGGATGATGGGCACCGCCGTGGAGCTCGGCCGGAGGCAC 240
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 GGCGGCGACCACCGCTTCTACGACGCATCCAGGGTCCGGCGAGGGTACCACCACCACGGG 300
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 CTCCCCAAGGCGAGGTGGGCCCCCGCCGTCCACCAGGAGAAGGCGGCCGAGGAGCCGTCC 360
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 CCGTCGCCGGCGAGGGCGCCGGTCCCGCCCCCCGGCGTCGCGGGCAACCTTGAGCGGTTC 420
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 GTGGCCGCCGTGACGCCGTTCGTGCCTGCTCAGTTCCCCTCCAAGATGCAGAGAGCCGCG 480
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 AGGGGGTGGCGGGGCTGCGGCGTGGATGCCGAGCGGGAGGAGGCCCCGCACTTCTTCCTC 540
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 AGAGACGTGTGGGAGGCGTACAGGGAGTGGAGTGCGTACGGTGCCGGTGTGCCGCTTGTC 600
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 CTCGATGGCTGCGACGGGGTCGTGCAGTATTACGTGCCGTACTTGTCCGCCATCCAGCTC 660
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 -----CTTATTGCTTGCTTGTGTTGTGATCTCAAGTTTTTATGCTCTCTTGGCCAGATAA 55
consensus_15290#0 TATGGAGACCCCGCAGTCCTGCGACTGTCTTCTGGCCCTAGACATATAATGG-ATGACAG 719
consensus_15290#2 ------------------------------------------TACGTACCGGCATGACAG 18
consensus_15290#1 CGGTGGTGCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTATACCACTATCTGTTTT 115
* **
consensus_15290#0 TGATGGGGAGTATCATGATTCCAGCAGT--GATGCAAGTAGTGATT-ATGAACTTGGAAG 776
consensus_15290#2 TGATGGGGAGTTTTTTGATTCCAGCAGT--GATGCAAGTAGTGATT-ATGAACTTGGAAG 75
consensus_15290#1 TGGTATGGCTTCTTACAAGTTCAGCAATTCAATATGGTCTTCGACTGATGGAGATCGGCA 175
** * ** * * * * ***** * ** ** * *** * * *
consensus_15290#0 AGTAAAACATCTAACTCAGGAAG--GCTTCTCAAGTGATGATGGTGAATCAGGAGATTTG 834
consensus_15290#2 AGTAAAACATCTAACTCAGGAAG--GCTTCTCAAGTGATGATGGTGAATCAGGAGATTTG 133
consensus_15290#1 GCTGGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGGGATAGTCGTACCAGCCA 235
* * * *** *** ****** * * ** ** * ** *
consensus_15290#0 CATGG-CCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAA--CCA 891
consensus_15290#2 CATGG-CCGCTTGCTCTTTCAATACCTTGAGTTTGATTCTCCATTTTGTCGTGAA--CCA 190
consensus_15290#1 TCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCTA 295
* * * * * *** * ** ** * * ** * * * * *
consensus_15290#0 TTGACTGATAAGATTTCCAGTC---TTTCAGCAAGATTTC-----------CAGGACTGA 937
consensus_15290#2 TTGACTGATAAGATTTCCAGTC---TTTCAGCAAGATTTC-----------CATGACTGA 236
consensus_15290#1 CGCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCGAAGG 355
** * **** *** * ** * *** **** ** *
consensus_15290#0 GGACCCTTAGAAGCTGTGATTTATCAC-------CGCGAAGT-------TGGATATCTGT 983
consensus_15290#2 GGACCCTTAAAAGCTGTGATTTATCAC-------CGCGAAGT-------TGGATATCTGT 282
consensus_15290#1 GGGAGGTGAATGGCTGATAGCTTTCACACATGCATGCGGAGAGACGGTGTGAGCTCCCAT 415
** * * **** * * **** *** ** ** * *
consensus_15290#0 TGCTTGGTATC--CAATTTACCGTATCCCTACTGGCC-CAACATTAAAAGATTTGGATGC 1040
consensus_15290#2 TGCTTGGTATC--CAATTTACCGTATCCCTACTGGCC-CAACATTAAAAGATTTGGATGC 339
consensus_15290#1 AGTAGGATGCAAGCAGTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCGG 475
* * * ** * * * * * * **** ** * * * **** *
consensus_15290#0 ATGCTTTCTCACCTTCCAT---CGGCTATCAAC-TGGGCCAGAAGAAGAT-AACGGTGGT 1095
consensus_15290#2 ATGCTTTCTCACCTTCCAT---CGGCTATCAAC-TGGGCCAGAAGAAGAT-AACGGTGGT 394
consensus_15290#1 CTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTTGAGATGAAAAGTGAA 535
** ** * * * ** *** *** * ** * * **** ** ***
consensus_15290#0 GCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTATACCACTATCTGTTTTTG---GT 1152
consensus_15290#2 GCTGTAAAATACTGGGGTCCTGGTAGCAAACCGACTA-ACCACTATCTGTTTTTG---GT 450
consensus_15290#1 AAAAAAAGCAAAAAAGGACTGAAGAAAAAGGCAGTAAAAAGATTAGCTGTGCTTGTTTGT 595
** * ** * * ** * * * * ** **** *** **
consensus_15290#0 ATGGCTT--CTTACAAGTTCAGCAATTCAATATGGTCTT-CGACTGATGGAGATCGGCAG 1209
consensus_15290#2 ATGGCTT--CTTACAAGTTCAGCAATTCAATATGGTCTT-CGACTGATGGAGATCGGCAG 507
consensus_15290#1 TGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTAAGGCTACTTATGTAATCCTACGA 655
*** * * ** ** * ** * ** * * *** *** * * *
consensus_15290#0 CT--GGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGGGATAGTCGTACCAGCC 1267
consensus_15290#2 CT--GGCAAGCTTCTTGCAGCAAGCTGCTTCTGACTGGCTGCGG---------------- 549
consensus_15290#1 ATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGCC 715
* ** ** * * * ** * ** ***
consensus_15290#0 ATCCAGACTACCAGTTTTTTGCTTCCCGTGGTGCATACAACAGGTAGTGGCACGGAGTCT 1327
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 TGTCTGACACTACAGACTGTTGTGTTTGAAGGGAACTTGTAGTTAGCAAATTAGAGTCAA 775
consensus_15290#0 ACGCCTTGGCAGAATTTGCAGCAGAATGTCTGGAAGGTTTCAGCTGTAAATACACCGAAG 1387
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 AAAAAAAAAAAAAAAAAAAAAAACAC---------------------------------- 801
consensus_15290#0 GGGGAGGTGAATGGCTGATAGCTTTCACACATGCAAGCGGAGAGACGGTGTGAGCTCCCA 1447
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 TAGTAGGATGCAAGCAGTGTTCTGCTTTGTAAATGGCGGTAATAGGGGAGGGTTTGATCG 1507
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 GCTGTGTTTTTATGCTTAATAGTCGGTGATCCTCCTGAGGGAAGTTGAGATGAAAAGTGA 1567
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 AAAAAAAAGCAAAAAAGGACTGAAGAAAAAGGCAGTAAAAAGATTAGCTGTGCTTGTTTG 1627
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 TTGAGCTATGCATGCATGTCGGGTTGTTGGACTTGTTGAGGCTACTTATGTAATCCTACG 1687
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 AATACGGGGGATGAGTTTTGATGATATTCCCCTTAATGTCTGTAAACACTTGTGAAGAGC 1747
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 CTGTCTGACACTACAGACTGTTGTGTTTGAAGGGAACTTGTAGTTAGCAAATTAGAGTCA 1807
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 TCCGCATCGTTTGTTCTATAGAATATAATGTTGATACTAATCATGTCTAGACTTGCAATG 1867
consensus_15290#2 ------------------------------------------------------------
consensus_15290#1 ------------------------------------------------------------
consensus_15290#0 CACAAATTAAGAGCTGCTGATGCGTGTAAACAGTCTGATGTTCATTAGTCAAATTACC 1925
consensus_15290#2 ----------------------------------------------------------
consensus_15290#1 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||