cluster # 15294

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Oryza sativa
cluster # 15294 cluster # 15294 Sequences # 21 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15294#0 length = 863 sequences # 2
consensus_15294#1 length = 810 sequences # 16

consensus_15294#2 length = 341 sequences # 1
consensus_15294#3 length = 222 sequences # 1
consensus_15294#4 length = 77 sequences # 1

consensusID : consensus_15294#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 863
fasta sequence

                              [TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATGGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCACCTCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACCTTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAA]

[+] EMBL CF297813             [TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATGGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGC                                                                                                                                                                                                          ]
[-] EMBL CF278681             [                                                                                                                                                                                                                                                                                                                       CACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGAT GGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCACCTCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACCTTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAA]




>consensus_15294#0
TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATAC
CGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGG
TTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGA
CATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGG
GACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTC
TTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATC
CAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGT
TTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATT
CAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATGGG
TGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCT
TATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTG
CCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCACC
TCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACCTT
GGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGG
AGAGGATAGGGGGAGTGGACGAA

consensusID : consensus_15294#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 810
fasta sequence

                              [TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAA-ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC-AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC-AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC-AGCTTCTTTG-TTTGTGGAGTTCCACTGACAA-CCCATGTATTAGCA-CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC-TTCAATGCCA-GGGATGGTGTTTACTCCTACTC-TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT-ACCCTTCCCCCC-GGTGCGCACAGCACCTGCCATCTTCTT-GAGCTT-GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG-CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAGAGGAAAAGGATAGGGCTCTAGGG]

[-] EMBL AU182079             [TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCAC                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AU101039             [TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCAGGGGATGGTGTTTACTCCTACTCTTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGNTGTAGTCTTATGGNCTGCCTTCTTCTTTCTGGGGACGGTAACCCTTCCCCCCGGGGGCGCACAGNACCTGCCATCTTCTTGGAGCTTGGTCAACATTC                                                                                                                              ]
[+] EMBL CF278682             [  TTTTTTTTTGGGGCAACCAAATTATGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF329487             [   TTTTTTTTGGGGCAACCGAAAGAAGCATTTAATTGATGTAAATATTTCACCATCATACCGGACCAAATTCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCATAGGTTTTTAAGAGCGGAGGTTTCTAATGGCAATTCACAGCTTATAATCCTTCACAAGAGAACACATGCAAC AAAATCATGAATCCTTTTTCTGTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAACTCCAGCACTGGCACCAGCCTCTTGACCATAAGCACCATGAACCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCACGACC AAGATGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGA                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI306249             [                    AAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAAAGGTTTTTAAAAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCA                                                                                                                                                                   ]
[+] EMBL CB964576             [                    AAAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGGCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCGACATTCA                                                                                                                             ]
[-] EMBL AK121674             [                     AAAGAGGCATTTAATTGATGTAAA ATTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATA                                                    ]
[-] EMBL CB000945             [                                               TTCCACCAACATACCGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCAAC AAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCT                                                                                                                                                 ]
[-] EMBL BF430577             [                                                                                                               AGGTCAGAGGTTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGACATGCACCAAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CC   GCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAG                       ]
[-] EMBL CF297812             [                                                                                                                                                                                                                                            ACCAGGGACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAGTGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAGGAAGACTCtttctactc                    ]
[-] EMBL CF299375             [                                                                                                                                                                                                                                                   ACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGCTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAGAGGAAAAGGATAGGGCTCTAGGG]
[-] EMBL CF324702             [                                                                                                                                                                                                                                                                         CGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGA                                ]
[-] EMBL CF291144             [                                                                                                                                                                                                                                                                          GTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTCTTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATCCAAGTTGTCAGGACC AAGTTGGTTGATAATTGATGGCAGCAGATCCTGC AGCTTCTTTG TTTGTGGAGTTCCACTGACAA CCCATGTATTAGCA CCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAG                                                             ]
[-] EMBL AU069607             [                                                                                                                                                                                                                                                                                                                                                           CCCCCGNAGATTATCCAAAGTGTCAGGNCCAAAGTTGGTTGATAATTGATGGCAGNAGATCCTGCAAGCTTCTTTGNTTTGTGGAGTCCTACTGACAACCCCATGTATTAGCACCCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCAC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGTGNGNNCGCGGCGGCGGCGGCGGAGGCGGCGGNGNNGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAcgg                                ]
[-] EMBL AU069214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CACTTTA GATTCAGAAACTGAAT ACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC GGTGCGCACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGA                                      ]
[-] EMBL CF339399             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCAGTAACTGAATAACCACATCATCCTTGAAAATGTTAACCTC TTCAATGCCA GGGATGGTGTTTACTCCTACTC TTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCT ACCCTTCCCCCC AGAGAAAACAGCACCTGCCATCTTCTT GAGCTT GTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAG CCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACTCGGGGAGAGGAAAAGGATAGGGC       ]




>consensus_15294#1
TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATAC
CGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGG
TTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGA
CATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGG
GACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTC
TTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATC
CAAGTTGTCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGT
TTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATT
CAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATGGT
GTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTT
ATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGC
CATCTTCTTGAGCTTGTCAACATTCATCTTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGG
CGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAAGAAGACT
CGGGGAGAGGAAAAGGATAGGGCTCTAGGG

consensusID : consensus_15294#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 341
fasta sequence

                              [TGATGGCGGCGTTCCTCAGGGGAGCTATGTGCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTC]

[-] EMBL AY224531             [TGATGGCGGCGTTCCTCAGGGGAGCTATGTGCAGGACCAAGTTGGTTGATAATTGATGGCAGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTC]




>consensus_15294#2
TGATGGCGGCGTTCCTCAGGGGAGCTATGTGCAGGACCAAGTTGGTTGATAATTGATGGC
AGCAGATCCTGCAGCTTCTTTGTTTGTGGAGTTCCACTGACAACCCATGTATTAGCACCA
ATTGAAGCTTGCACTTTAGGATTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTA
ACCTCTTCAATGCCAGGGATGGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTT
TTGTCATCTGTGGTTGTAGTCTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTC
CCCCCGGTGCGCACAGCACCTGCCATCTTCTTGAGCTTGTC

consensusID : consensus_15294#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 222
fasta sequence

                              [CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCCCTCCTCCCCACAGCCAAGATGAATGTTGACAAGCTCAAGAAGATGGAGGTGCTGTGCGACCGGGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAGCTTAGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN]

[+] EMBL C29156               [CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCCCTCCTCCCCACAGCCAAGATGAATGTTGACAAGCTCAAGAAGATGGAGGTGCTGTGCGACCGGGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAGCTTAGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN]




>consensus_15294#3
CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCCCT
CCTCCCCACAGCCAAGATGAATGTTGACAAGCTCAAGAAGATGGAGGTGCTGTGCGACCG
GGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAGCTT
AGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN

consensusID : consensus_15294#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 77
fasta sequence

                              [AGCTGGTGGTGAATACGCTGGCGCCAGTGCTGGAGCTGCTCACGGTGACGATGATGATGTTCCTGAGCTTGTCCCTG]

[+] EMBL CF309913             [AGCTGGTGGTGAATACGCTGGCGCCAGTGCTGGAGCTGCTCACGGTGACGATGATGATGTTCCTGAGCTTGTCCCTG]




>consensus_15294#4
AGCTGGTGGTGAATACGCTGGCGCCAGTGCTGGAGCTGCTCACGGTGACGATGATGATGT
TCCTGAGCTTGTCCCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15294#0      TTTTTAAGGCTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATAC 60
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      TTTTTTTTTTTGGGGCAACCAAAAGAGGCATTTAATTGATGTAAAATTCCACCAACATAC 60
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      CGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTGGGTCAGAGG 120
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      CGGACCAAATCCTCGTACATGACAAAACCGAGCACTGACACAAATAAGGTAGGTCAGAGG 120
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      TTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGA 180
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      TTTTTAAGAGCGGAGGTCTCTAATGGCAATTCGCAACTTATAATCCTTCACAGGAGAAGA 180
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      CATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGG 240
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      CATGCAACAAAATCATGATTCCTTTTTCTCTTCTGCTGCCTCCTCAAATGTCTCACCAGG 240
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      GACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTC 300
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      GACAAGCTCAGGAACATCATCATCGTCACCCTGAGCAGCTCCAGCACTGGCACCAGCCTC 300
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      TTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATC 360
consensus_15294#2      ----------------------------------TGATG-GCGGCGTTCCTCAGGGGAGC 25
consensus_15294#1      TTCACCAGAAGCACCAGGAGCCTGCTTTTGGAATTGCTCTGCAAGCCTCCGCAGATTATC 360
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      --CTCCCCCTATCCTCTCCTCCCACCGCGCCGCCGCCTCCGCGCCGCCGCCGCGCTCCCC 58
                                                                                   

consensus_15294#0      CAAGTTGTCAGGACCAAGTTGGTTGATAAT-TGATGGCAGCAGATCCTGCAGCTTCTTTG 419
consensus_15294#2      TATGTG--CAGGACCAAGTTGGTTGATAAT-TGATGGCAGCAGATCCTGCAGCTTCTTTG 82
consensus_15294#1      CAAGTTGTCAGGACCAAGTTGGTTGATAAT-TGATGGCAGCAGATCCTGCAGCTTCTTTG 419
consensus_15294#4      ----------------AGCTGGTGGTGAATACGCTGGCGCCAG-TGCTGGAGCTGCTCAC 43
consensus_15294#3      CTCCTCCCCACAGCCAAGATGAATGTTGACAAGCTCA-AGAAGATGGAGGTGCTGTGCGA 117
                                       ** **   *   *   * *      ** *   *  ***      

consensus_15294#0      TTTGTGGAGTTCCACTG-ACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGA 478
consensus_15294#2      TTTGTGGAGTTCCACTG-ACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGA 141
consensus_15294#1      TTTGTGGAGTTCCACTG-ACAACCCATGTATTAGCACCAATTGAAGCTTGCACTTTAGGA 478
consensus_15294#4      GGTGACGA----TGATG-ATGTTCC-TGAGCTTGTCCCTG-------------------- 77
consensus_15294#3      CCGGGGGAAGGGTAGCGTGCGAGAAGAAGAGGAGTCCATAAGCTAAACCACAGTGCAAAG 177
                          *  **        *                *  *                       

consensus_15294#0      TTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAGTGCCAGGGATG 538
consensus_15294#2      TTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATG 201
consensus_15294#1      TTCAGAAACTGAATAACCACATCATCCTTGAAAATGTTAACCTCTTCAATGCCAGGGATG 538
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      CTTAGAGACTCTNAAAGAGAGGGTAACACATCCTGGATTNAGAGN--------------- 222
                                                                                   

consensus_15294#0      GGTGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGT 598
consensus_15294#2      G-TGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGT 260
consensus_15294#1      G-TGTTTACTCCTACTCTTTTCAGAGTGCTCTGAAGTCTTTTGTCATCTGTGGTTGTAGT 597
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      CTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACC 658
consensus_15294#2      CTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACC 320
consensus_15294#1      CTTATGGACTGCCTTCTTCTTTCTGCGCACGCTACCCTTCCCCCCGGTGCGCACAGCACC 657
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      TGCCATCTTCTTGAGCTTGTCAACATTCATCTTCTATAGCGATTCCCCTCACGAAAACCA 718
consensus_15294#2      TGCCATCTTCTTGAGCTTGTC--------------------------------------- 341
consensus_15294#1      TGCCATCTTCTTGAGCTTGTCAACATTCATCT----TGGCTGTGGGGAGGAGGGGGAGCC 713
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      CCTCGAACGATTGCCGGAGACGCGTCGCCCCAGGCCAAATCTTGCAGAGGCTCGCCTACC 778
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      GCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGAGGAGAGGATAGGGGGAGTGGACGAA 773
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      TTGGCTGTGGGGAGGAGGGGGAGCCGCGGCGGCGGCGGCGGAGGCGGCGGCGCGGTGGGA 838
consensus_15294#2      ------------------------------------------------------------
consensus_15294#1      GAAGACTCGGGGAGAGGAAAAGGATAGGGCTCTAGGG----------------------- 810
consensus_15294#4      ------------------------------------------------------------
consensus_15294#3      ------------------------------------------------------------
                                                                                   

consensus_15294#0      GGAGAGGATAGGGGGAGTGGACGAA 863
consensus_15294#2      -------------------------
consensus_15294#1      -------------------------
consensus_15294#4      -------------------------
consensus_15294#3      -------------------------