cluster # 15304

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Oryza sativa
cluster # 15304 cluster # 15304 Sequences # 21 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15304#0 length = 1207 sequences # 13
consensus_15304#1 length = 863 sequences # 6

consensus_15304#2 length = 828 sequences # 1
consensus_15304#3 length = 509 sequences # 1

consensusID : consensus_15304#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1207
fasta sequence

                              [GTAGAAAAAGAAAATACGAGGACGACGGCGGCGGCGACGATTCCAACGAGAGGAGAAGCGCAAGGAGGA-TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAATGCCTTTGGTGGCGAGAATTCGAGCATTGGTGTTTGCTCCTTGTTCAGATATACGGTTGATGTTCTTTCCTTCCTTCTGGGAGCTTGTAAAACGTTGAATTAGCTTGCCACATTTTTGTTACATTTGTTTGGACAAGACAAGGTGGGCAGAAGGCAAAAGAAGGAAGAAGCTAAAGAGTGGTTGTT]

[+] EMBL CF339250             [GTAGAAAAAGAAAATACGAGGACGACGGCGGCGGCGACGATTCCAACGAGAGGAGAAGCGCAAGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF338252             [               ACGAGGACGACGGCGGCGGCGACGATTCCAACGAGAGGAGAAGCGCAAGGAGGATTAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGNCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK067858             [                         CGGCGGCGGCGACGATTCCAACGAGAGGAGAAGCGCAAGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACAT                                                                                                                                                                                                           ]
[+] EMBL AK060030             [                                                     AGAAGCGCAAGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCACCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGAT                                                                                                                                                                                                        ]
[+] EMBL AK106030             [                                                     AGAAGCGCAAGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGTTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAATGCCTTTGGTGGCGAGAATTCGAGCATTGGTGTTTGCTCCTTGTTCAGATATACGGTTGATGTTCTTTCCTTCCTTCTGGGAGCTTGTAAAACGTTGAATTAGCTTGCCACATTTTTGTTACATTTGTTTGGACAAGACAAGGTGGGCAGAAGGCAAAAGAAGGAAGAAGCTAAAGAGTGGTTGTT]
[+] EMBL AK061467             [                                                     AGAAGCGCAAGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGTTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAATGCCTTTGGTGGCGAGAATTCGAGCATTGGTGTTTGCTCCTTGTTCAGATATACGGTTGATGTTCTTTCCTTCCTTCTGGGAGCTTGTAAAACGTTGAATTAGCTTGCCACATTTTTGTTACATTTGTTTGGACAAGACAAGGTGGGCAGAAGGCAAAAGAAGGAAGAAGCTAAAGAGTGGTTGTT]
[+] EMBL CB618715             [                                                        AGCGCAAGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAG                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS2384A             [                                                              AGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTNATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSS3369A             [                                                              AGGAGGA TAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGNCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGNCCGGNTCCTTCCTCCTCGACCTCAAGACCCACTNCAAGGATGTGCGCTTNCAATTCATGAACTCCGNGCTGCTGCTCGACCGNCGCGTCAG CTCACCTACACGGACTCCACCACCCTCTCCCCGGGNCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU083429             [                                                                         GCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAGGCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAG CTCACCTACACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU173124             [                                                                                                                                                            CACGGCCGCCGCCACCCTCGCCTTCACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGCGGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB618716             [                                                                                                                                                                                                                                                                                                                                                                                 CAGCCTCACNTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTGCCCGCCCGCACCGCCCTTGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATA                                                                                                                                                                                                       ]
[+] EMBL AU173125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAATGCCTTTGGTGGCGAGAATTCGAGCATTGGTGTTTGCTCCTTGTTCAGATATACGGTTGATGTTCTTTCCTTCCTTCTGGGAGCTTGTAAAACGTTGAATTAGCTTGCCAaaaa                                                                        ]




>consensus_15304#0
GTAGAAAAAGAAAATACGAGGACGACGGCGGCGGCGACGATTCCAACGAGAGGAGAAGCG
CAAGGAGGATAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAG
GCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTC
ACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGC
GGGCCCTCCCTCGAGGGCCTCATCCTCACCCTCGAGAAGCCCGGCTCCTTCCTCCTCGAC
CTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCTCGAC
CGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAAGCTG
CCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAGCCTC
TCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCAAGAC
CGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTC
ACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTC
CTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCA
TTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTAC
GAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCAT
ACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTG
CCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTG
ACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAA
ATGCCTTTGGTGGCGAGAATTCGAGCATTGGTGTTTGCTCCTTGTTCAGATATACGGTTG
ATGTTCTTTCCTTCCTTCTGGGAGCTTGTAAAACGTTGAATTAGCTTGCCACATTTTTGT
TACATTTGTTTGGACAAGACAAGGTGGGCAGAAGGCAAAAGAAGGAAGAAGCTAAAGAGT
GGTTGTT

consensusID : consensus_15304#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 863
fasta sequence

                              [CGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGAT-CTGT-CTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNAAAAAANNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNAANNNNNAAAAANANNNNNNNNNNGGGGGGGGGGGGGGGGGGAAAAAANNNAANNAAAGGGGGAAAATTAANNGGCCGGAAGGGGGGGGGNNNNAAAAAAAAGGGGGGGAGAGGGAAAAAAGGGGGGANAAAAAAAAAAAAANNNAAAAGAAAAGAGAAANNNANNNGAAGAGGGGGAGAAAAAAAAAGAGGGGGGCGGGGGGGGGNNNNGAAAAAAAGGGGGGAAANNGAGAGGGGAAAAGGGGCCCCCCCNAGNNNNGGNANNAAAAAGCGCGGGGGGGGTGCGGGGACC]

[+] EMBL CA756827             [CGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGAT CTGT CTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNAAAAAANNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNAANNNNNAAAAANANNNNNNNNNNGGGGGGGGGGGGGGGGGGAAAAAANNNAANNAAAGGGGGAAAATTAANNGGCCGGAAGGGGGGGGGNNNNAAAAAAAAGGGGGGGAGAGGGAAAAAAGGGGGGANAAAAAAAAAAAAANNNAAAAGAAAAGAGAAANNNANNNGAAGAGGGGGAGAAAAAAAAAGAGGGGGGCGGGGGGGGGNNNNGAAAAAAAGGGGGGAAANNGAGAGGGGAAAAGGGGCCCCCCCNAGNNNNGGNANNAAAAAGCGCGGGGGGGGTGCGGGGACC]
[-] EMBL CF328202             [                                    GTTTCAAGGAGGGGATGCCATCAAGGCCACTTACCAAGCTTCCACCAAGTTCTTGGCCCTGGATTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGAT CTGT TTGACCAAAGCAAAGCGCCAAAGTTAATAGCGGAGAGCACGTGGAATTACGAGATTTGATTGCTTTTTTTAGGAGGCAGGCAATTCCTGTTTAAGAAGCACCCTTGTCAAACTGGTTGTCTTGTACTTGGGAACTATTCTTTTTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGTTACGGCATTGACAATGAACCCCGATTATTTTTTACTATATTTTTTAAGGCACATGATATGATTGACCAAAAAAAAAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU183233             [                                          AGGAGGGGATGCCATCAAGGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGAT CTGT CTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAANAAGCACCCNTGTCANACTGGTTGTCTTGNACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAANACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGANCAAAAAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU083430             [                                                                                            CCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGAT CTGT CTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU097138             [                                                                                                                                          CGCAGCGTCATTTGATCCTGTCCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACAAA                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL D42509               [                                                                                                                                                                                                           GAATTACGAGATCTGATTG CNCNNCTAGGA GCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTCGTACTTGGG ACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATA                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_15304#1
CGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAA
GGCCACCTACCAAGCCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGAT
CGGTGCCTCCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAA
GCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCA
ACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTT
CTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTG
GAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTC
TCTAATGCACATGATATGATTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNAAAAAANNNNNNNNNNNNANNNNNN
NNNNNNNNNNNNNNNNNNNNNNANNNNNNNNAANNNNNAAAAANANNNNNNNNNNGGGGG
GGGGGGGGGGGGGAAAAAANNNAANNAAAGGGGGAAAATTAANNGGCCGGAAGGGGGGGG
GNNNNAAAAAAAAGGGGGGGAGAGGGAAAAAAGGGGGGANAAAAAAAAAAAAANNNAAAA
GAAAAGAGAAANNNANNNGAAGAGGGGGAGAAAAAAAAAGAGGGGGGCGGGGGGGGGNNN
NGAAAAAAAGGGGGGAAANNGAGAGGGGAAAAGGGGCCCCCCCNAGNNNNGGNANNAAAA
AGCGCGGGGGGGGTGCGGGGACC

consensusID : consensus_15304#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 828
fasta sequence

                              [ATTGTATGTGTTAGCTCATGCATCAACAACCCTTAATGATATGGATGGGTTTTGGGCCGGCTTAAGAGTCAGCCTTCATGACATGCCTTAACTGATACTGGTACAGAAGGGTGCTGACTTTATTCTAACTTATCTAAAGAAGACTATCTTCCTATATCTCAGTCTCACACAGAGAGACCATGATATGTGCCACAATGCAATATCGTAATTCTGTGACCATATTGTGCTATTGATGGCAAAGAACAAATATTTGGCTAGTTATATTGATTTGTTGCCTGCTTGTTTGAGTTCATTTAACAAAGAATGTCAATAGTACTTTTTGTTCAAAAAGGTACCCATGCAACCCTGCTTAAATCCGCAACAAGGCACTGGTGTGCTGTCTGACTAGCTCCTTCCGAACATTGAAAGCAACTTGCTATGCTATTTTCACTATAGATGTTTGTAGAGGTACTCTTATAGCTACCGACCATGTTTTTCATCTTGACCATGTTATGCTTCTCTCTTCAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACGTATATTCTCTAATGCACATGATATGATTGACCAAAAAAAAAGA]

[-] EMBL CB635563             [ATTGTATGTGTTAGCTCATGCATCAACAACCCTTAATGATATGGATGGGTTTTGGGCCGGCTTAAGAGTCAGCCTTCATGACATGCCTTAACTGATACTGGTACAGAAGGGTGCTGACTTTATTCTAACTTATCTAAAGAAGACTATCTTCCTATATCTCAGTCTCACACAGAGAGACCATGATATGTGCCACAATGCAATATCGTAATTCTGTGACCATATTGTGCTATTGATGGCAAAGAACAAATATTTGGCTAGTTATATTGATTTGTTGCCTGCTTGTTTGAGTTCATTTAACAAAGAATGTCAATAGTACTTTTTGTTCAAAAAGGTACCCATGCAACCCTGCTTAAATCCGCAACAAGGCACTGGTGTGCTGTCTGACTAGCTCCTTCCGAACATTGAAAGCAACTTGCTATGCTATTTTCACTATAGATGTTTGTAGAGGTACTCTTATAGCTACCGACCATGTTTTTCATCTTGACCATGTTATGCTTCTCTCTTCAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACGTATATTCTCTAATGCACATGATATGATTGACCAAAAAAAAAGA]




>consensus_15304#2
ATTGTATGTGTTAGCTCATGCATCAACAACCCTTAATGATATGGATGGGTTTTGGGCCGG
CTTAAGAGTCAGCCTTCATGACATGCCTTAACTGATACTGGTACAGAAGGGTGCTGACTT
TATTCTAACTTATCTAAAGAAGACTATCTTCCTATATCTCAGTCTCACACAGAGAGACCA
TGATATGTGCCACAATGCAATATCGTAATTCTGTGACCATATTGTGCTATTGATGGCAAA
GAACAAATATTTGGCTAGTTATATTGATTTGTTGCCTGCTTGTTTGAGTTCATTTAACAA
AGAATGTCAATAGTACTTTTTGTTCAAAAAGGTACCCATGCAACCCTGCTTAAATCCGCA
ACAAGGCACTGGTGTGCTGTCTGACTAGCTCCTTCCGAACATTGAAAGCAACTTGCTATG
CTATTTTCACTATAGATGTTTGTAGAGGTACTCTTATAGCTACCGACCATGTTTTTCATC
TTGACCATGTTATGCTTCTCTCTTCAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGC
AAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTA
GGAGGCAGGCAACTCCTGCTTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGG
AACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTG
CCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTT
TTACGTATATTCTCTAATGCACATGATATGATTGACCAAAAAAAAAGA

consensusID : consensus_15304#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 509
fasta sequence

                              [TCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAACCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCTAGGTCCCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACCAGATCTGATTGCCTCTTCTACGAGGCAGGCAACTCCTGCTTAATAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACTCCTGCAACCC]

[+] EMBL CB678809             [TCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACCTACCAAACCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCCTCCTTCTAGGTCCCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAGCGGAGAGCACGTGGAATTACCAGATCTGATTGCCTCTTCTACGAGGCAGGCAACTCCTGCTTAATAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGCAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTCATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATGCACATGATATGATTGAACTCCTGCAACCC]




>consensus_15304#3
TCCTACGCGCACGGCCAAGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAAC
AACGCCTGGGACTTCGCCGTCACCCGCAAGTTTCAAGGAGGGGATGCCATCAAGGCCACC
TACCAAACCTCCACCAAGCTCCTCGCCCTCGACTGGACCAGGGACTCCAAGATCGGTGCC
TCCTTCTAGGTCCCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATA
GCGGAGAGCACGTGGAATTACCAGATCTGATTGCCTCTTCTACGAGGCAGGCAACTCCTG
CTTAATAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTG
CAACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGT
CATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACTATATTCTCTAATG
CACATGATATGATTGAACTCCTGCAACCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15304#0      GTAGAAAAAGAAAATACGAGGACGACGGCGGCGGCGACGATTCCAACGAGAGGAGAAGCG 60
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      CAAGGAGGATAGGCGGCGGCGGCGACTGGGCGAAAGTGATCAGAGCTCGCGAGGATGAAG 120
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      GCGACGGTGAAGGGCAGGTACGAGGGCGACAAGGCCACGGCCGCCGCCACCCTCGCCTTC 180
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      ACCCCCTCCGCCGCCGACCTCCGCTTCAAGGCCTCCGCCACCGATGCCGCCTTCGCCCGC 240
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      ---------------------------------ATTGTATGTGTTAGCTCATGCATCAAC 27
                                                                                   

consensus_15304#0      GGGCCCTCCCTCGAGGGCCTCATCCTCACCC--TCGAGAAGCCCGGCTCCTT--CCTCCT 296
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      AACCCTTAATGATATGGATGGGTTTTGGGCCGGCTTAAGAGTCAGCCTTCATGACATGCC 87
                                                                                   

consensus_15304#0      CGACCTCAAGCCCCACTCCAAGGATGTGCGCTTCCAATTCATGAACTCCGCGCTGCTGCT 356
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      TTAACTGATACTGGTACAGAAGGGTGCTGACTTTATTCTAACTTATCTAAAGAAGACTAT 147
                                                                                   

consensus_15304#0      CGACCGCCGCGTCAGCCTCACCTACACGCACTCCACCACCCTCTCCCCGGGCCCCGCCAA 416
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      CTTCCTATATCTCAGTCTCACACAGAGAGACCATGATATGTGCCACAATGCAATATCGTA 207
                                                                                   

consensus_15304#0      GCTGCCCGCCCGCACCGCCCTCGACGGCTCCCTCACCTTCGATCCGGCCAACAAGCTCAG 476
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      ATTCTGTGACCATATTGTGCTATTGATGGCAAAGAACAAATATTTGGCTAGTTATATTGA 267
                                                                                   

consensus_15304#0      CCTCTCCCACACGCTCGGCTCCTCCGGATGCCGCGTCAAGTACTCCTACGCGCACGGCCA 536
consensus_15304#3      -------------------------------------------TCCTACGCGCACGGCCA 17
consensus_15304#1      ------------------------------------------------------------
consensus_15304#2      TTTGTT------GCCTGCTTGTTTGAGTTCATTTAACAAAGAATGTCAATAGTACTTTTT 321
                                                                                   

consensus_15304#0      AGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGC 596
consensus_15304#3      AGACCGCCTCACCACCATCGAGCCCTGCTTCGACACCGCTAACAACGCCTGGGACTTCGC 77
consensus_15304#1      ------------------------------------CGCTAACAACGCCTGGGACTTCGC 24
consensus_15304#2      GTTCAAAAAGGTACCCATGCAACCCTGCTTAAAT-CCGC-AACAAGGCACTGGTGTGCTG 379
                                                           *** ***** **   **  * *  

consensus_15304#0      CGTCACCCGCAAGTTTCAAGGAGGGGATGCCAT---CAAGGCCACCTAC----CAAGCCT 649
consensus_15304#3      CGTCACCCGCAAGTTTCAAGGAGGGGATGCCAT---CAAGGCCACCTAC----CAAACCT 130
consensus_15304#1      CGTCACCCGCAAGTTTCAAGGAGGGGATGCCAT---CAAGGCCACCTAC----CAAGCCT 77
consensus_15304#2      TCTGACTAGCTCCTTCCGAACATTGAAAGCAACTTGCTATGCTATTTTCACTATAGATGT 439
                         * **  **   ** * *  *  * * ** *    * * ** *  * *     *    *

consensus_15304#0      CCACCAAGCTCCTC-----GCCCTCGACTGGACCAGGGACT----CCAAGATCGGTGCCT 700
consensus_15304#3      CCACCAAGCTCCTC-----GCCCTCGACTGGACCAGGGACT----CCAAGATCGGTGCCT 181
consensus_15304#1      CCACCAAGCTCCTC-----GCCCTCGACTGGACCAGGGACT----CCAAGATCGGTGCCT 128
consensus_15304#2      TTGTAGAGGTACTCTTATAGCTACCGACCATGTTTTTCATCTTGACCATGTTATGCTTCT 499
                             ** * ***     **   ****          *      *** * *  *   **

consensus_15304#0      CCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAG 760
consensus_15304#3      CCTTCTAGGTCCCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAG 241
consensus_15304#1      CCTTCAAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAG 188
consensus_15304#2      CTCTTCAGGTCGCAGCGTCATTTGATCTGTCTGACCAAAGCAAAGCGCCAAAGCTAATAG 559
                       *  *  ***** ************************************************

consensus_15304#0      CGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGC 820
consensus_15304#3      CGGAGAGCACGTGGAATTACCAGATCTGATTGCCTCTTCTACGAGGCAGGCAACTCCTGC 301
consensus_15304#1      CGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGC 248
consensus_15304#2      CGGAGAGCACGTGGAATTACGAGATCTGATTGCCTCTTCTAGGAGGCAGGCAACTCCTGC 619
                       ******************** ******************** ******************

consensus_15304#0      TTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGC 880
consensus_15304#3      TTAATAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGC 361
consensus_15304#1      TTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGC 308
consensus_15304#2      TTAAGAAGCACCCTTGTCATACTGGTTGTCTTGTACTTGGGAACTATTCTTTCTGGGTGC 679
                       **** *******************************************************

consensus_15304#0      AACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTC 940
consensus_15304#3      AACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTC 421
consensus_15304#1      AACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTC 368
consensus_15304#2      AACAATTTCAATACCTACTGCCCTTTGTTCATTTTTGGCTGCCCTATGATTGGAGTTGTC 739
                       ************************************************************

consensus_15304#0      ATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTAC-TATATTCTCTAATG 999
consensus_15304#3      ATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTAC-TATATTCTCTAATG 480
consensus_15304#1      ATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTAC-TATATTCTCTAATG 427
consensus_15304#2      ATGGCGATGCTACGGCATTGACAATGAACACCGATTATCTTTTACGTATATTCTCTAATG 799
                       ********************************************* **************

consensus_15304#0      CACATGATATGATTGAACAAAA------------TGCCTTTGGTGGCGAGAATTCGAGCA 1047
consensus_15304#3      CACATGATATGATTGAACTCC-------------TGCAACCC------------------ 509
consensus_15304#1      CACATGATATGATTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 487
consensus_15304#2      CACATGATATGATTGACCAAAAAAAAAGA------------------------------- 828
                       **************** *                                          

consensus_15304#0      TTGGTGTTTGCTCCTTGTTCAGATATACGGTTGATGTTCTTTCCTTCCTTCTGGGAGCTT 1107
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      AAAAAAAAAAAAAAAAAAAAAAAAANNNAAAAAANNNNNNNNNNNNANNNNNNNNNNNNN 547
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      GTAAAACGTTGAATTAGCTTGCCACATTTTTGTTACATTTGTTTGGACAAGACAAGGTGG 1167
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      NNNNNNNNNNNNNNNANNNNNNNNAANNNNNAAAAANANNNNNNNNNNGGGGGGGGGGGG 607
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      GCAGAAGGCAAAAGAAGGAAGAAGCTAAAGAGTGGTTGTT-------------------- 1207
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      GGGGGGAAAAAANNNAANNAAAGGGGGAAAATTAANNGGCCGGAAGGGGGGGGGNNNNAA 667
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      ------------------------------------------------------------
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      AAAAAAGGGGGGGAGAGGGAAAAAAGGGGGGANAAAAAAAAAAAAANNNAAAAGAAAAGA 727
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      ------------------------------------------------------------
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      GAAANNNANNNGAAGAGGGGGAGAAAAAAAAAGAGGGGGGCGGGGGGGGGNNNNGAAAAA 787
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      ------------------------------------------------------------
consensus_15304#3      ------------------------------------------------------------
consensus_15304#1      AAGGGGGGAAANNGAGAGGGGAAAAGGGGCCCCCCCNAGNNNNGGNANNAAAAAGCGCGG 847
consensus_15304#2      ------------------------------------------------------------
                                                                                   

consensus_15304#0      ----------------
consensus_15304#3      ----------------
consensus_15304#1      GGGGGGTGCGGGGACC 863
consensus_15304#2      ----------------