Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1531 cluster # 1531       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1531#0 length = 2877 sequences # 1  
consensus_1531#1 length = 814 sequences # 1  

consensusID : consensus_1531#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2877
fasta sequence
                              [GTCAAGTCTGGCGAGGCAGTGATAAACTATTCTCAACTCCAAGCTGAAGCTGAAACTAGAAATTTAACCATATATACCGATCGATCTTAGCTTGCATCTGGAGCTCACTGAGGTTTTGGCAATGGCGCAAGGGGACGACGCTACCGAGCAGCAGCCATATTGGGAGTACACGCTGCGGAAGTACCTCCTGCTGCTGGCCTCGCTGGTGGCCACGGTGGCGTACGGCGCCGGGTTCAGCCCGCCGGGCGGCGCGTGGCAGGTCACCGCCGGCGGGCACACCGCCGGCGACCCCATCATCCGGGACCTCTACTACGGCCGGTACCTCGTCTTCTTCTACTGCAACGCCACCGCGTTCGCGTCGTCTCTGCTCGTCATCGTCCTCATCCTCCTCTTCGCCGTGCTCCACGAGAAGCGGAACATGTGGGTCACCGTCATGCCGCTCCGGGTGGTCATGGTGCTCGACCTGCTCAGCCTCATGGGCGCCTACACCGCGGGGACGTGCCGGGACGCCACCACCACCAGGTACACCGCCGTGCTCGTCGCCGCCGTGTTCGTCTACCTCGTCGTGCAGATGGTGCTCGCCTCGCTCGCCGGCGGCGACGACGAGGACGAGCACGTCGTCACCAAGGAGCGGTCGCGCAAGGTGCTCCTGCTGCTTGCCACGTTCGCCACGAGCCTCACGTACGTGGCCGGGCTGAGCACGCCGGGAGGGTTCTGGGCGGACGGCGTCGCCGGCCACCGCGCCGGCGAGGCGGTCATGGGGGAGCGGCACCCGGCGCGGCTGACGGCGTTCCTCCTCTGCAACACCACCGCGTTCGTCGCGTCGCTGCTCATCATCGTGCTGCTCCTCGACCGGAAGCTGCGCGACGGCACGGTGCGGTCCTGGGAGCTGTACGGGTGCATCGTCGTCGCGCTGGTCGGGCTCGTCGGAGCGTACGCCGCCGGCAGCTCGAGGGCGGAGCACACCACCGTGTACGTGCTGGCGCTCGTCGGCGCCGTGCTCGTGTACATCGCCTTCCACCTCACCGTCGTGCCGTGCGTCAAGCAGGCGCTTGGCAACACGAAGCTCGCACGGATCTACTCTTCGATATCAAAACGACGATATTGTCCCAAGCAAGACCAAGAAGTAGATCAGGCCACTATTGACAGGGAGGCGGAACATAACCGAGCTATGGAGAAGGCTCGCTCTCTCGTTCTACTGCTCGCCACTCTAGCAGCGACCGTCACTTTCCAAGCTGCGCTAGATCCGCCGGGTGGGTATTGGCAGGATGACAATGGCGACCACAAGGCCGGTAACCCGATTCTCCTAACAACTAACCCTAGAAGGTACAAGGCATTCTTCTACTGCAACTCGACCGCCTTCGTGTCATCCTTACTTGCCATCATCCTAGTGCAGAGCAGGTCTCTGCTCAAGCGCCACGCGCTAGAGGCAGCCATGATTCTGGATTTGTTTGGGCTCATGGGTGCATATGCAGCGGGAAGCTGTCGGGATGCGAGTACCTCCATTTATGTTATGGCCATAGCCGGTGCCGTGCTGGTGTATGTTGTGATCCATGTCGTGTTCTTCACACTAGACCAGAGAGGACACGACGAAGATGTATTGCTGGAGAAGAGGCGCAAGAGGTTGCTCCTTTTCGCCATCTTGTCCGCAACCATCACCTACCAAGCCGGGCTAACCCCACCAAGTGGCTTCTGGCAAGATGATAGTGATGGTCACCGTGCAGGCGAGCCAGTCCTCTTCAGCAACAACCCTTACCGTTTTAAAGCCTTTTTCTACTGCAACACCACCAGCTTTATGTCATCTATCGCCCTCATCATCCTTCTCGTGAACCCAAATTTGTACAGGCCAGCCATTCAGAGCTATGCGCTCTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTACGCCGCTGGGAGCTCACAGCATATGCGTACATCCATCTTTGTCTTCGCATTGGTGCTTATTTTTGTGGCCATACTTCTTGTGGTATTCGTGGTGCGCCAGAACCATGGCAACACTGCCACCAGACAGAACTCCCAGGGTGACCAAAACCAGAGAGGTGACAACAGTGGAAGCGAAAATCACACCAAGCGCAAGTACCTGATGCTACTGGGGATCCTGGCAGCGAGCGTCACCTACCAGGCCGGCCTGCACCCGCCGGGCGGCGTGTGGCAGAGCGACGACGACGGCGCAGGCCACGCGGCCGGCAACCCGGTCCTCCGCGACAACCGGAGGCGGCGGTACCGCGCCTTCTTCTACAGCAACTCCACTTCCTTCATGGCGTCCGTCGTCGTCATCGTCCTGCTGCTGCCGGAGTCGGCATCACCGCATGTCAACGAGTGGTTGCTGAAGGCGATGAACACGACGATTGTTCTCGACATGATTGGCCTCCTGGTGGCCTATGGGGCAGGGTCCAGCAGGGAATGGGAGACATCTGGATATGTCATCGCCATGGCCGTCGTCGTGCTGGGCTACATTGCAGTGCACGGGGTGTTGTCGACCTTCGGCCAGGGTCACAAGGCAGGTGGTAATAATCCGCAGATTACACCTGAGCTGGATGCCGAGTCCCAAGAACCAGGAAATGGCAGGCGAACGGCGGCACAGGGAAGCTATATGCATTATCCATCCCAGAATGTGATGCAGTGATGAGATGCGTTTTCAGCCTGATTGAATTCCACAAGCTAATCAACTGAAATATCTAGCGGGCAAGAACATTATGTACTGCAATTCTTCTCCATATCTTTCTTATTTTCTAGGCTTCTTCTCTCAGTTTTTTTTTTTCATTTTTTCCCAAGTCTCTCCTGTTGTAAGTGGATTATCCTGAATAAATCCAGTCACCCAAGGGCATGAAAAGTGCTTTTGAGGGT]

[+] EMBL AK119403             [GTCAAGTCTGGCGAGGCAGTGATAAACTATTCTCAACTCCAAGCTGAAGCTGAAACTAGAAATTTAACCATATATACCGATCGATCTTAGCTTGCATCTGGAGCTCACTGAGGTTTTGGCAATGGCGCAAGGGGACGACGCTACCGAGCAGCAGCCATATTGGGAGTACACGCTGCGGAAGTACCTCCTGCTGCTGGCCTCGCTGGTGGCCACGGTGGCGTACGGCGCCGGGTTCAGCCCGCCGGGCGGCGCGTGGCAGGTCACCGCCGGCGGGCACACCGCCGGCGACCCCATCATCCGGGACCTCTACTACGGCCGGTACCTCGTCTTCTTCTACTGCAACGCCACCGCGTTCGCGTCGTCTCTGCTCGTCATCGTCCTCATCCTCCTCTTCGCCGTGCTCCACGAGAAGCGGAACATGTGGGTCACCGTCATGCCGCTCCGGGTGGTCATGGTGCTCGACCTGCTCAGCCTCATGGGCGCCTACACCGCGGGGACGTGCCGGGACGCCACCACCACCAGGTACACCGCCGTGCTCGTCGCCGCCGTGTTCGTCTACCTCGTCGTGCAGATGGTGCTCGCCTCGCTCGCCGGCGGCGACGACGAGGACGAGCACGTCGTCACCAAGGAGCGGTCGCGCAAGGTGCTCCTGCTGCTTGCCACGTTCGCCACGAGCCTCACGTACGTGGCCGGGCTGAGCACGCCGGGAGGGTTCTGGGCGGACGGCGTCGCCGGCCACCGCGCCGGCGAGGCGGTCATGGGGGAGCGGCACCCGGCGCGGCTGACGGCGTTCCTCCTCTGCAACACCACCGCGTTCGTCGCGTCGCTGCTCATCATCGTGCTGCTCCTCGACCGGAAGCTGCGCGACGGCACGGTGCGGTCCTGGGAGCTGTACGGGTGCATCGTCGTCGCGCTGGTCGGGCTCGTCGGAGCGTACGCCGCCGGCAGCTCGAGGGCGGAGCACACCACCGTGTACGTGCTGGCGCTCGTCGGCGCCGTGCTCGTGTACATCGCCTTCCACCTCACCGTCGTGCCGTGCGTCAAGCAGGCGCTTGGCAACACGAAGCTCGCACGGATCTACTCTTCGATATCAAAACGACGATATTGTCCCAAGCAAGACCAAGAAGTAGATCAGGCCACTATTGACAGGGAGGCGGAACATAACCGAGCTATGGAGAAGGCTCGCTCTCTCGTTCTACTGCTCGCCACTCTAGCAGCGACCGTCACTTTCCAAGCTGCGCTAGATCCGCCGGGTGGGTATTGGCAGGATGACAATGGCGACCACAAGGCCGGTAACCCGATTCTCCTAACAACTAACCCTAGAAGGTACAAGGCATTCTTCTACTGCAACTCGACCGCCTTCGTGTCATCCTTACTTGCCATCATCCTAGTGCAGAGCAGGTCTCTGCTCAAGCGCCACGCGCTAGAGGCAGCCATGATTCTGGATTTGTTTGGGCTCATGGGTGCATATGCAGCGGGAAGCTGTCGGGATGCGAGTACCTCCATTTATGTTATGGCCATAGCCGGTGCCGTGCTGGTGTATGTTGTGATCCATGTCGTGTTCTTCACACTAGACCAGAGAGGACACGACGAAGATGTATTGCTGGAGAAGAGGCGCAAGAGGTTGCTCCTTTTCGCCATCTTGTCCGCAACCATCACCTACCAAGCCGGGCTAACCCCACCAAGTGGCTTCTGGCAAGATGATAGTGATGGTCACCGTGCAGGCGAGCCAGTCCTCTTCAGCAACAACCCTTACCGTTTTAAAGCCTTTTTCTACTGCAACACCACCAGCTTTATGTCATCTATCGCCCTCATCATCCTTCTCGTGAACCCAAATTTGTACAGGCCAGCCATTCAGAGCTATGCGCTCTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTACGCCGCTGGGAGCTCACAGCATATGCGTACATCCATCTTTGTCTTCGCATTGGTGCTTATTTTTGTGGCCATACTTCTTGTGGTATTCGTGGTGCGCCAGAACCATGGCAACACTGCCACCAGACAGAACTCCCAGGGTGACCAAAACCAGAGAGGTGACAACAGTGGAAGCGAAAATCACACCAAGCGCAAGTACCTGATGCTACTGGGGATCCTGGCAGCGAGCGTCACCTACCAGGCCGGCCTGCACCCGCCGGGCGGCGTGTGGCAGAGCGACGACGACGGCGCAGGCCACGCGGCCGGCAACCCGGTCCTCCGCGACAACCGGAGGCGGCGGTACCGCGCCTTCTTCTACAGCAACTCCACTTCCTTCATGGCGTCCGTCGTCGTCATCGTCCTGCTGCTGCCGGAGTCGGCATCACCGCATGTCAACGAGTGGTTGCTGAAGGCGATGAACACGACGATTGTTCTCGACATGATTGGCCTCCTGGTGGCCTATGGGGCAGGGTCCAGCAGGGAATGGGAGACATCTGGATATGTCATCGCCATGGCCGTCGTCGTGCTGGGCTACATTGCAGTGCACGGGGTGTTGTCGACCTTCGGCCAGGGTCACAAGGCAGGTGGTAATAATCCGCAGATTACACCTGAGCTGGATGCCGAGTCCCAAGAACCAGGAAATGGCAGGCGAACGGCGGCACAGGGAAGCTATATGCATTATCCATCCCAGAATGTGATGCAGTGATGAGATGCGTTTTCAGCCTGATTGAATTCCACAAGCTAATCAACTGAAATATCTAGCGGGCAAGAACATTATGTACTGCAATTCTTCTCCATATCTTTCTTATTTTCTAGGCTTCTTCTCTCAGTTTTTTTTTTTCATTTTTTCCCAAGTCTCTCCTGTTGTAAGTGGATTATCCTGAATAAATCCAGTCACCCAAGGGCATGAAAAGTGCTTTTGAGGGT]


>consensus_1531#0 GTCAAGTCTGGCGAGGCAGTGATAAACTATTCTCAACTCCAAGCTGAAGCTGAAACTAGA AATTTAACCATATATACCGATCGATCTTAGCTTGCATCTGGAGCTCACTGAGGTTTTGGC AATGGCGCAAGGGGACGACGCTACCGAGCAGCAGCCATATTGGGAGTACACGCTGCGGAA GTACCTCCTGCTGCTGGCCTCGCTGGTGGCCACGGTGGCGTACGGCGCCGGGTTCAGCCC GCCGGGCGGCGCGTGGCAGGTCACCGCCGGCGGGCACACCGCCGGCGACCCCATCATCCG GGACCTCTACTACGGCCGGTACCTCGTCTTCTTCTACTGCAACGCCACCGCGTTCGCGTC GTCTCTGCTCGTCATCGTCCTCATCCTCCTCTTCGCCGTGCTCCACGAGAAGCGGAACAT GTGGGTCACCGTCATGCCGCTCCGGGTGGTCATGGTGCTCGACCTGCTCAGCCTCATGGG CGCCTACACCGCGGGGACGTGCCGGGACGCCACCACCACCAGGTACACCGCCGTGCTCGT CGCCGCCGTGTTCGTCTACCTCGTCGTGCAGATGGTGCTCGCCTCGCTCGCCGGCGGCGA CGACGAGGACGAGCACGTCGTCACCAAGGAGCGGTCGCGCAAGGTGCTCCTGCTGCTTGC CACGTTCGCCACGAGCCTCACGTACGTGGCCGGGCTGAGCACGCCGGGAGGGTTCTGGGC GGACGGCGTCGCCGGCCACCGCGCCGGCGAGGCGGTCATGGGGGAGCGGCACCCGGCGCG GCTGACGGCGTTCCTCCTCTGCAACACCACCGCGTTCGTCGCGTCGCTGCTCATCATCGT GCTGCTCCTCGACCGGAAGCTGCGCGACGGCACGGTGCGGTCCTGGGAGCTGTACGGGTG CATCGTCGTCGCGCTGGTCGGGCTCGTCGGAGCGTACGCCGCCGGCAGCTCGAGGGCGGA GCACACCACCGTGTACGTGCTGGCGCTCGTCGGCGCCGTGCTCGTGTACATCGCCTTCCA CCTCACCGTCGTGCCGTGCGTCAAGCAGGCGCTTGGCAACACGAAGCTCGCACGGATCTA CTCTTCGATATCAAAACGACGATATTGTCCCAAGCAAGACCAAGAAGTAGATCAGGCCAC TATTGACAGGGAGGCGGAACATAACCGAGCTATGGAGAAGGCTCGCTCTCTCGTTCTACT GCTCGCCACTCTAGCAGCGACCGTCACTTTCCAAGCTGCGCTAGATCCGCCGGGTGGGTA TTGGCAGGATGACAATGGCGACCACAAGGCCGGTAACCCGATTCTCCTAACAACTAACCC TAGAAGGTACAAGGCATTCTTCTACTGCAACTCGACCGCCTTCGTGTCATCCTTACTTGC CATCATCCTAGTGCAGAGCAGGTCTCTGCTCAAGCGCCACGCGCTAGAGGCAGCCATGAT TCTGGATTTGTTTGGGCTCATGGGTGCATATGCAGCGGGAAGCTGTCGGGATGCGAGTAC CTCCATTTATGTTATGGCCATAGCCGGTGCCGTGCTGGTGTATGTTGTGATCCATGTCGT GTTCTTCACACTAGACCAGAGAGGACACGACGAAGATGTATTGCTGGAGAAGAGGCGCAA GAGGTTGCTCCTTTTCGCCATCTTGTCCGCAACCATCACCTACCAAGCCGGGCTAACCCC ACCAAGTGGCTTCTGGCAAGATGATAGTGATGGTCACCGTGCAGGCGAGCCAGTCCTCTT CAGCAACAACCCTTACCGTTTTAAAGCCTTTTTCTACTGCAACACCACCAGCTTTATGTC ATCTATCGCCCTCATCATCCTTCTCGTGAACCCAAATTTGTACAGGCCAGCCATTCAGAG CTATGCGCTCTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTACGCCGC TGGGAGCTCACAGCATATGCGTACATCCATCTTTGTCTTCGCATTGGTGCTTATTTTTGT GGCCATACTTCTTGTGGTATTCGTGGTGCGCCAGAACCATGGCAACACTGCCACCAGACA GAACTCCCAGGGTGACCAAAACCAGAGAGGTGACAACAGTGGAAGCGAAAATCACACCAA GCGCAAGTACCTGATGCTACTGGGGATCCTGGCAGCGAGCGTCACCTACCAGGCCGGCCT GCACCCGCCGGGCGGCGTGTGGCAGAGCGACGACGACGGCGCAGGCCACGCGGCCGGCAA CCCGGTCCTCCGCGACAACCGGAGGCGGCGGTACCGCGCCTTCTTCTACAGCAACTCCAC TTCCTTCATGGCGTCCGTCGTCGTCATCGTCCTGCTGCTGCCGGAGTCGGCATCACCGCA TGTCAACGAGTGGTTGCTGAAGGCGATGAACACGACGATTGTTCTCGACATGATTGGCCT CCTGGTGGCCTATGGGGCAGGGTCCAGCAGGGAATGGGAGACATCTGGATATGTCATCGC CATGGCCGTCGTCGTGCTGGGCTACATTGCAGTGCACGGGGTGTTGTCGACCTTCGGCCA GGGTCACAAGGCAGGTGGTAATAATCCGCAGATTACACCTGAGCTGGATGCCGAGTCCCA AGAACCAGGAAATGGCAGGCGAACGGCGGCACAGGGAAGCTATATGCATTATCCATCCCA GAATGTGATGCAGTGATGAGATGCGTTTTCAGCCTGATTGAATTCCACAAGCTAATCAAC TGAAATATCTAGCGGGCAAGAACATTATGTACTGCAATTCTTCTCCATATCTTTCTTATT TTCTAGGCTTCTTCTCTCAGTTTTTTTTTTTCATTTTTTCCCAAGTCTCTCCTGTTGTAA GTGGATTATCCTGAATAAATCCAGTCACCCAAGGGCATGAAAAGTGCTTTTGAGGGT



consensusID : consensus_1531#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 814
fasta sequence
                              [TTTAGCAACNCCCACGCCGATACAAAGCCTTCTTCTATTGCAACACAACGAGCTTCATGTCATCCATCGCCCTTATCATACTCTTGATCAATCCAAATTTGTACAGGCCAGCCATTCATAGCTATGCGCTTTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTATGCCGCCGGAAGCTCACAACATATGCGGACATCCATATATATCTTCGTTTTGCTATTCATTTTTCTGGTCTTACTTCTTGTAGCATTCGTGGTGCACCGGAAATCTCAGGGCAAGCAGAACAAGAGAACAAATGAAGCGGAAGTACCTGATACGAATGACATCAAGCGTAAACAGTACACCAAGCGCAAGAACCTGATGCTACTGGGGACTCTAGCAGCGAGTGTCACCTACCAGGCCGGCTTGCACCCACCAGGTGGCGTGTGGCAGAGCAACGATAGTGCTGGCCATGCCGCTGGTGACCCGGTCTTGCATGACATGCAAAGGCTACGGTATCGTGCCTTCTTCTACAGTAACTCCACTTCCTTCATGGCGTCTATCATTGTCATCATCTTGTTGTTGCCAGAGTCGCTAAAACTGAATGTCAATGAGTGGTTGTTGAAGGCAATGAACACGACAATTGTTCTTGACATGATTGGACTCCTGGTAGCCTATGGTACTGGCTCTAGTANGGATTGGGACACATCTGGATATGTCATCGCGATGGCAATATTTGGTCTAGGCTACATTGCAATCCATGCTATGCTTTCGAAGTTGAGCCAGGTTGNCAACCATCGNGNTGCTTCTGAGGATCCTGAGTC]

[+] EMBL CB096502             [TTTAGCAACNCCCACGCCGATACAAAGCCTTCTTCTATTGCAACACAACGAGCTTCATGTCATCCATCGCCCTTATCATACTCTTGATCAATCCAAATTTGTACAGGCCAGCCATTCATAGCTATGCGCTTTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTATGCCGCCGGAAGCTCACAACATATGCGGACATCCATATATATCTTCGTTTTGCTATTCATTTTTCTGGTCTTACTTCTTGTAGCATTCGTGGTGCACCGGAAATCTCAGGGCAAGCAGAACAAGAGAACAAATGAAGCGGAAGTACCTGATACGAATGACATCAAGCGTAAACAGTACACCAAGCGCAAGAACCTGATGCTACTGGGGACTCTAGCAGCGAGTGTCACCTACCAGGCCGGCTTGCACCCACCAGGTGGCGTGTGGCAGAGCAACGATAGTGCTGGCCATGCCGCTGGTGACCCGGTCTTGCATGACATGCAAAGGCTACGGTATCGTGCCTTCTTCTACAGTAACTCCACTTCCTTCATGGCGTCTATCATTGTCATCATCTTGTTGTTGCCAGAGTCGCTAAAACTGAATGTCAATGAGTGGTTGTTGAAGGCAATGAACACGACAATTGTTCTTGACATGATTGGACTCCTGGTAGCCTATGGTACTGGCTCTAGTANGGATTGGGACACATCTGGATATGTCATCGCGATGGCAATATTTGGTCTAGGCTACATTGCAATCCATGCTATGCTTTCGAAGTTGAGCCAGGTTGNCAACCATCGNGNTGCTTCTGAGGATCCTGAGTC]


>consensus_1531#1 TTTAGCAACNCCCACGCCGATACAAAGCCTTCTTCTATTGCAACACAACGAGCTTCATGT CATCCATCGCCCTTATCATACTCTTGATCAATCCAAATTTGTACAGGCCAGCCATTCATA GCTATGCGCTTTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTATGCCG CCGGAAGCTCACAACATATGCGGACATCCATATATATCTTCGTTTTGCTATTCATTTTTC TGGTCTTACTTCTTGTAGCATTCGTGGTGCACCGGAAATCTCAGGGCAAGCAGAACAAGA GAACAAATGAAGCGGAAGTACCTGATACGAATGACATCAAGCGTAAACAGTACACCAAGC GCAAGAACCTGATGCTACTGGGGACTCTAGCAGCGAGTGTCACCTACCAGGCCGGCTTGC ACCCACCAGGTGGCGTGTGGCAGAGCAACGATAGTGCTGGCCATGCCGCTGGTGACCCGG TCTTGCATGACATGCAAAGGCTACGGTATCGTGCCTTCTTCTACAGTAACTCCACTTCCT TCATGGCGTCTATCATTGTCATCATCTTGTTGTTGCCAGAGTCGCTAAAACTGAATGTCA ATGAGTGGTTGTTGAAGGCAATGAACACGACAATTGTTCTTGACATGATTGGACTCCTGG TAGCCTATGGTACTGGCTCTAGTANGGATTGGGACACATCTGGATATGTCATCGCGATGG CAATATTTGGTCTAGGCTACATTGCAATCCATGCTATGCTTTCGAAGTTGAGCCAGGTTG NCAACCATCGNGNTGCTTCTGAGGATCCTGAGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1531#0      GTCAAGTCTGGCGAGGCAGTGATAAACTATTCTCAACTCCAAGCTGAAGCTGAAACTAGA 60
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      AATTTAACCATATATACCGATCGATCTTAGCTTGCATCTGGAGCTCACTGAGGTTTTGGC 120
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      AATGGCGCAAGGGGACGACGCTACCGAGCAGCAGCCATATTGGGAGTACACGCTGCGGAA 180
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GTACCTCCTGCTGCTGGCCTCGCTGGTGGCCACGGTGGCGTACGGCGCCGGGTTCAGCCC 240
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GCCGGGCGGCGCGTGGCAGGTCACCGCCGGCGGGCACACCGCCGGCGACCCCATCATCCG 300
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GGACCTCTACTACGGCCGGTACCTCGTCTTCTTCTACTGCAACGCCACCGCGTTCGCGTC 360
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GTCTCTGCTCGTCATCGTCCTCATCCTCCTCTTCGCCGTGCTCCACGAGAAGCGGAACAT 420
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GTGGGTCACCGTCATGCCGCTCCGGGTGGTCATGGTGCTCGACCTGCTCAGCCTCATGGG 480
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CGCCTACACCGCGGGGACGTGCCGGGACGCCACCACCACCAGGTACACCGCCGTGCTCGT 540
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CGCCGCCGTGTTCGTCTACCTCGTCGTGCAGATGGTGCTCGCCTCGCTCGCCGGCGGCGA 600
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CGACGAGGACGAGCACGTCGTCACCAAGGAGCGGTCGCGCAAGGTGCTCCTGCTGCTTGC 660
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CACGTTCGCCACGAGCCTCACGTACGTGGCCGGGCTGAGCACGCCGGGAGGGTTCTGGGC 720
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GGACGGCGTCGCCGGCCACCGCGCCGGCGAGGCGGTCATGGGGGAGCGGCACCCGGCGCG 780
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GCTGACGGCGTTCCTCCTCTGCAACACCACCGCGTTCGTCGCGTCGCTGCTCATCATCGT 840
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GCTGCTCCTCGACCGGAAGCTGCGCGACGGCACGGTGCGGTCCTGGGAGCTGTACGGGTG 900
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CATCGTCGTCGCGCTGGTCGGGCTCGTCGGAGCGTACGCCGCCGGCAGCTCGAGGGCGGA 960
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GCACACCACCGTGTACGTGCTGGCGCTCGTCGGCGCCGTGCTCGTGTACATCGCCTTCCA 1020
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CCTCACCGTCGTGCCGTGCGTCAAGCAGGCGCTTGGCAACACGAAGCTCGCACGGATCTA 1080
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CTCTTCGATATCAAAACGACGATATTGTCCCAAGCAAGACCAAGAAGTAGATCAGGCCAC 1140
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      TATTGACAGGGAGGCGGAACATAACCGAGCTATGGAGAAGGCTCGCTCTCTCGTTCTACT 1200
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GCTCGCCACTCTAGCAGCGACCGTCACTTTCCAAGCTGCGCTAGATCCGCCGGGTGGGTA 1260
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      TTGGCAGGATGACAATGGCGACCACAAGGCCGGTAACCCGATTCTCCTAACAACTAACCC 1320
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      TAGAAGGTACAAGGCATTCTTCTACTGCAACTCGACCGCCTTCGTGTCATCCTTACTTGC 1380
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CATCATCCTAGTGCAGAGCAGGTCTCTGCTCAAGCGCCACGCGCTAGAGGCAGCCATGAT 1440
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      TCTGGATTTGTTTGGGCTCATGGGTGCATATGCAGCGGGAAGCTGTCGGGATGCGAGTAC 1500
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      CTCCATTTATGTTATGGCCATAGCCGGTGCCGTGCTGGTGTATGTTGTGATCCATGTCGT 1560
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GTTCTTCACACTAGACCAGAGAGGACACGACGAAGATGTATTGCTGGAGAAGAGGCGCAA 1620
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GAGGTTGCTCCTTTTCGCCATCTTGTCCGCAACCATCACCTACCAAGCCGGGCTAACCCC 1680
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      ACCAAGTGGCTTCTGGCAAGATGATAGTGATGGTCACCGTGCAGGCGAGCCAGTCCTCTT 1740
consensus_1531#1      ----------------------------------------------------------TT 2
                                                                                **

consensus_1531#0      CAGCAACAACCCTTACCGTTTTAAAGCCTTTTTCTACTGCAACACCACCAGCTTTATGTC 1800
consensus_1531#1      TAGCAACN-CCCACGCCGATACAAAGCCTTCTTCTATTGCAACACAACGAGCTTCATGTC 61
                       ******  ***   *** *  ******** ***** ******** ** ***** *****

consensus_1531#0      ATCTATCGCCCTCATCATCCTTCTCGTGAACCCAAATTTGTACAGGCCAGCCATTCAGAG 1860
consensus_1531#1      ATCCATCGCCCTTATCATACTCTTGATCAATCCAAATTTGTACAGGCCAGCCATTCATAG 121
                      *** ******** ***** **  *  * ** ************************** **

consensus_1531#0      CTATGCGCTCTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTACGCCGC 1920
consensus_1531#1      CTATGCGCTTTCCGTTTGCATGGTGGCTGGCATGTTTGGTCTCATGGGTGCCTATGCCGC 181
                      ********* ******************************************** *****

consensus_1531#0      TGGGAGCTCACAGCATATGCGTACATCCATCTTTGTCTTCGCATTGGTGCTTATTTTTGT 1980
consensus_1531#1      CGGAAGCTCACAACATATGCGGACATCCATATATATCTTCGTTTTGCTATTCATTTTTCT 241
                       ** ******** ******** ******** * * ******  *** *  * ****** *

consensus_1531#0      GGCCATACTTCTTGTGGTATTCGTGGTGCGCCAGAACCATGGCAACACTGCCACCAGACA 2040
consensus_1531#1      GGTCTTACTTCTTGTAGCATTCGTGGTGCACCGGAAATCTCAGGGCAA-GCAGAACAAGA 300
                      ** * ********** * *********** ** ***   *     **  **      * *

consensus_1531#0      GAACTCCCAGGGTGACCAAAACCAGAGAGGTGACAACAGTGGAAGCGAAAATCACACCAA 2100
consensus_1531#1      GAACAAATGAAGCGGA-AGTACCTGATACG-AATGACATCAAGCGTAAACAGTACACCAA 358
                      ****       * *   *  *** ** * *  *  ***      *  ** *  *******

consensus_1531#0      GCGCAAGTACCTGATGCTACTGGGGATCCTGGCAGCGAGCGTCACCTACCAGGCCGGCCT 2160
consensus_1531#1      GCGCAAGAACCTGATGCTACTGGGGACTCTAGCAGCGAGTGTCACCTACCAGGCCGGCTT 418
                      ******* ******************  ** ******** ****************** *

consensus_1531#0      GCACCCGCCGGGCGGCGTGTGGCAGAGCGACGACGACGGCGCAGGCCACGCGGCCGGCAA 2220
consensus_1531#1      GCACCCACCAGGTGGCGTGTGGCAGAGCAACGA---TAGTGCTGGCCATGCCGCTGGTGA 475
                      ****** ** ** *************** ****     * ** ***** ** ** **  *

consensus_1531#0      CCCGGTCCTCCGCGACAACCGGAGGCGGCGGTACCGCGCCTTCTTCTACAGCAACTCCAC 2280
consensus_1531#1      CCCGGTCTTGCATGACATGCAAAGGCTACGGTATCGTGCCTTCTTCTACAGTAACTCCAC 535
                      ******* * *  ****  *  ****  ***** ** ************** ********

consensus_1531#0      TTCCTTCATGGCGTCCGTCGTCGTCATCGTCCTGCTGCTGCCGGAGTCGGCATCACCGCA 2340
consensus_1531#1      TTCCTTCATGGCGTCTATCATTGTCATCATCTTGTTGTTGCCAGAGTCGCTAAAACTGAA 595
                      ***************  ** * ****** ** ** ** **** ******  *  ** * *

consensus_1531#0      TGTCAACGAGTGGTTGCTGAAGGCGATGAACACGACGATTGTTCTCGACATGATTGGCCT 2400
consensus_1531#1      TGTCAATGAGTGGTTGTTGAAGGCAATGAACACGACAATTGTTCTTGACATGATTGGACT 655
                      ****** ********* ******* *********** ******** *********** **

consensus_1531#0      CCTGGTGGCCTATGGGGCAGGGTCCAGCAGGGAATGGGAGACATCTGGATATGTCATCGC 2460
consensus_1531#1      CCTGGTAGCCTATGGTACTGGCTCTAGTANGGATTGGGACACATCTGGATATGTCATCGC 715
                      ****** ********  * ** ** ** * *** ***** ********************

consensus_1531#0      CATGGCCGTCGTCGTGCTGGGCTACATTGCAGTGCACGGGGTGTTGTCGACCTTCGGCCA 2520
consensus_1531#1      GATGGCAATATTTGGTCTAGGCTACATTGCAATCCATGCTATGCTTTCGAAGTTGAGCCA 775
                       *****  *  * *  ** ************ * ** *   ** * ****  **  ****

consensus_1531#0      GGGTCACAAGGCAGGTGGTAATAATCCGCAGATTACACCTGAGCTGGATGCCGAGTCCCA 2580
consensus_1531#1      GGTTGNCAACCATCGNGNTGCT--TCTGAGGAT----CCTGAGTC--------------- 814
                      ** *  ***     * * *  *  ** *  ***    ******                 

consensus_1531#0      AGAACCAGGAAATGGCAGGCGAACGGCGGCACAGGGAAGCTATATGCATTATCCATCCCA 2640
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GAATGTGATGCAGTGATGAGATGCGTTTTCAGCCTGATTGAATTCCACAAGCTAATCAAC 2700
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      TGAAATATCTAGCGGGCAAGAACATTATGTACTGCAATTCTTCTCCATATCTTTCTTATT 2760
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      TTCTAGGCTTCTTCTCTCAGTTTTTTTTTTTCATTTTTTCCCAAGTCTCTCCTGTTGTAA 2820
consensus_1531#1      ------------------------------------------------------------
                                                                                  

consensus_1531#0      GTGGATTATCCTGAATAAATCCAGTCACCCAAGGGCATGAAAAGTGCTTTTGAGGGT 2877
consensus_1531#1      ---------------------------------------------------------
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)