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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1480 fasta sequence
[CACCATTTCCAAGAACTCAGAGCTCTCTTCCACCGGTCATCTCCTCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTCGCCGCCATCACCGACGGTAACGCGCATGCCTTTTGGTTTGGTTTGATGCGTTCGTTTCCGCGTGTGTAACGCTCGCCGGCGGCGAGGTGCAGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTGCGCGGGACGCGGGTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCGAGGGGAGCCACGCGGTGCGGCTCGGGAACGAGGCGTCGATCCGGCAGCGGCTCGCCGGCGCGGCGCGCGGCGCGCGGTACGCGCTCACGTTCAGCGCGGCGCGGACGTGCGCGCAGGCGGAGCGGCTGAACGTGTCGGCGTCGGGGCAGTGGGCGGTGCTCCCCATGCAGACCATGTACAGCAGCAACGGCTGGGACTCGTACGCCTGGGCCTGGGATGCCGCCGCCGACGCGTTCGACGTCGTCATCCACAACCCCGGCGTCACCGAGGACCCCGCCTGCGGCCCCCTCATCGACTCCGTCGCCATCCGCACCCTCAACCCTCCTCGCCGCACCAACAAGAACCTGGTGAAGAACGGGGACTTCGAGGAGGGCCCGTACATCATCCCGGGGACTAGGTGGGGGGTGCTGATCCCGTCCATGGTGGTGGACGAGCACTCGCCGCTGCCGGGGTGGATGGTGGAGTCGCTCAAGGCGGTGAAGTACATCGACAGCG-ACCACTTC-GCGGTGCCGCGCGGGCGGCGCTCTG-TCGAG-CTGCTG-GCGGGG-CGGGAGA-GCGCGATCGCGCAGGTGATCCGCACCGT-CCCCGG-GAGGCAGTACGCGCTGTCGTTCA-CCGTCGGCGACGCC-AGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAGTCCACCAGGGTGGCGCACGAGTCGGCTGGC-CGCGGCGGCGCCGCCAA-GCGCGCCGTGCTGCCGTTCCGCGCC-GCCGC-GGC-GCGCACCCGCGTCGTGTTCTTCAGCTCGTTCTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGA-TCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGT-CTAGCTAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTATTA-TTA-TTTTGTCGGTTCCTGGTATATATTTGAATTTTGCAGTTTAAGCATGCGTTAGAAAATCAGTTCGACTGAATAATAATACAATATTT]
[+] EMBL AK106819 [CACCATTTCCAAGAACTCAGAGCTCTCTTCCACCGGTCATCTCCTCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTCGCCGCCATCACCGACGGTAACGCGCATGCCTTTTGGTTTGGTTTGATGCGTTCGTTTCCGCGTGTGTAACGCTCGCCGGCGGCGAGGTGCAGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTGCGCGGGACGCGGGTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCGAGGGGAGCCACGCGGTGCGGCTCGGGAACGAGGCGTCGATCCGGCAGCGGCTCGCCGGCGCGGCGCGCGGCGCGCGGTACGCGCTCACGTTCAGCGCGGCGCGGACGTGCGCGCAGGCGGAGCGGCTGAACGTGTCGGCGTCGGGGCAGTGGGCGGTGCTCCCCATGCAGACCATGTACAGCAGCAACGGCTGGGACTCGTACGCCTGGGCCTGGGATGCCGCCGCCGACGCGTTCGACGTCGTCATCCACAACCCCGGCGTCACCGAGGACCCCGCCTGCGGCCCCCTCATCGACTCCGTCGCCATCCGCACCCTCAACCCTCCTCGCCGCACCAACAAGAACCTGGTGAAGAACGGGGACTTCGAGGAGGGCCCGTACATCATCCCGGGGACTAGGTGGGGGGTGCTGATCCCGTCCATGGTGGTGGACGAGCACTCGCCGCTGCCGGGGTGGATGGTGGAGTCGCTCAAGGCGGTGAAGTACATCGACAGCG ACCACTTC GCGGTGCCGCGCGGGCGGCGC CTG TCGAG CTGCTG GCGGGG CGGGAGA GCGCGATCGCGCAGGTGATCCGCACCGT CCCCGG GAGGCAGTACGCGCTGTCGTTCA CCGTCGGCGACGCC AGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAGTCCACCAGGGTGGCGCACGAGTCGGCTGGC CGCGGCGGCGCCGCCAA GCGCGCCGTGCTGCCGTTCCGCGCC GCCGC GGC GCGCATCCGCGTCGTGTTCTTCAGCTCGTTCTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGA TCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGT CTAGCTAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTATTA TTA TTTTGTCGGTTCCTGGTATATATTTGAATTTTGCAGTTTAAGCATGCGTTAGAAAATCAGTTCGACTGAATAATAATACAATATTT]
[+] EMBL OSC311 [ ACTTCGAGGAGGGCCCGTACATCATCCCGGGGACTAGGTGGGGGGTGCTGATCCCGTCCATGGTGGTGGACGAGCACTCGCCGCTGCCGGGGTGGATGGTGGAGTCGCTCAAGGCGGTGAAGTACATCGACAGCG ACCACTTN GCGGTGCCGCGCGGGCGGCGCGCTN TCGAG CTGCTN GNGGGG CGGGAGA GCGCGATCGCGNAGGTGATCCTNACCGT NCCCGGTGAGGCAGTACGCGCTGTCGTTCACCCNTCGGCGAC ]
[-] EMBL CB964922 [ GCCGGGGTGGTTGTTGGATTCGCTCAAGGCGTTGAAGTACATCGACAGCG ACCACTTC GCGGTGCCGCTCGGGCGGCGCTCCGTTCGAGTCTTCTGTTCGGGT CGGGAGA GCGCGATCGCGCAGGTGATCCGCACCGT CCCCGG GAGGCAGTACGCGCTGTCGTTCA CCGTCGGCGACGCC AGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAGTCCACCAGGGTGGCGCACGAGTCGGCTGGC CGCGGCGGCGCCGCCAAGGCGCGCCGTGCTGCCGTTCCGCGCC GCCGC GGC GCGCACCCGCGTCGTGTTCTTCAGCTCGTTCTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGA TCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGT CTAGCTAGCGCCATTGCCGCGATGTCGTACTACTACTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTATTA TTA TTTTGTCGGTTC ]
[+] EMBL BI801350 [ tatTGTTGGATTCGCTCA GCGGTGAAGTACATCGACATCGTACCACTTCTGC GTTCCGCGCGGGCGGCGCTCCG TCGAGTCTGCTGTGCGGGGCCGGGAGATGCGCGATCGC CAGTTGATCCGCACCGTCCCCCGG GA GCAGTACGCGCTTTCGTTCA CCGTCGGCGACGCCAAGCAACGGCTGCGAGGGGTC CTGTTGGTGGAGGCGTAC CCGGGAGGGAGTCCACCA GGTGGCGCACGAGTC GCT GC C CGGCGGC CCCCCAA GCGC CCGT CT CCGTTCCGC CC CCGC GGC GCGCACCCGC TCGTGTTCTTCAGCTCGTTCTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGA TCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGT CTAGCTAGCGCCATTGCCGCGATGTCGTACTACTACTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTATTACTTACTTTTGTCGGTTCCTGGTAaaaaaaa ]
[+] EMBL AU223099 [ GCAGTACGCGCTGTCGTTCA CCGTCGGCGACGCC AGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAGTCCNCCAGGGTGGCGCACGAGTCGGCTGGC CGCGGCGGCGCCGCCAA GCGCGCCGTGCTGCCGTTCCGCGCC GCCGC GGC GCGCACCCGCGTCGTGTTCTTCAGCTCGTTNTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGA TCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGT CTAGCTAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTATTA TTA TTTTGTCGGTTCaaaaa ]
[+] EMBL AU030921 [ ACGAGTCGGCTGGCNCGCGGCGGCGCCGCCAA GCGCGCCGTGCTGCCGTTTCCCGCC GCCGC GGC GCGCACCCGCGTCGTGTTCTTCAGCTCGTTCTACAGCNCCNGGNGCGACGACATGAGCTCGCTCTGCGGGCCGGTGATTCGA GACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTNGGGTCCTAG TAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTNTTN TTAaaaaaa ]
[+] EMBL AU223105 [ CGCCAAGGGGCGCCGTGCTGCCGTTCCGNGCCGGCCGCGGGCGGCGCACCCGGGGTGGGTTCTTCAGCTCGTTCTNCAGCNCCAGGAGCGACGACATGAGCTCGCTNTGCGGGCCGGTGA TCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGT CTAGCTAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATATATATAATTATTA TTA TTTTGTCaaaaaaa ]
consensusID : consensus_15315#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence
[ATCGCGCAGGTGATCCGCACCGTCCCCGGGAGGCAGTACGCGCTGTCGTTCACCGTCGGCGACGCCAGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAGTCCACCAGGGTGGCGCACGAGTCGGCTGGCCGCGGCGGCGCCGCCAAGCGCGCCGTGCTGCCGTTCCGCGCCGCCGCGGCGCGCACACACGCGTCGTGTTCTTCAGCTCGTTCTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGATCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGAGCTAGGGTCTAGCTAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]
[-] EMBL AU225441 [ATCGCGCAGGTGATCCGCACCGTCCCCGGGAGGCAGTACGCGCTGTCGTTCACCGTCGGCGACGCCAGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAGTCCACCAGGGTGGCGCACGAGTCGGCTGGCCGCGGCGGCGCCGCCAAGCGCGCCGTGCTGCCGTTCCGCGCCGCCGCGGCGCGCACACACGCGTCGTGTTCTTCAGCTCGTTCTACAGCACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGATCGACGACGTCGCCGTCGTCAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGAGCTAGGGTCTAGCTAGCGCCATTGCCGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAATTGGTCGATCGAGAATAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]
consensusID : consensus_15315#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 359 fasta sequence
[CCAAG-AACT-CAG-AG-CT-CT-CTT-CCACCGGT-CATCT-CCT-CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTC-GCGC-ANT-CACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTGCGCGGGACGGGGGTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGC-TGGTGGTCCCCG-AGGGG-AGCCACG-CGGTGCGGC-TCG-GGAACGAGGCGTCGATCCGNCAACCGGG]
[+] EMBL OSS2036A [CCAAG AACT CAG AG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTC G NC ANTNCACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTG ]
[+] EMBL OSS2077A [CCAAGTAACTNCAGAAGACTACTACTTCCCACCGGTNCATCTGNCTNCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTC GC C AGT CACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGC ]
[+] EMBL OSS3303A [ AG AACT CAG AG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTC GCGC CAT CACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGNTGCGCGGGACGGGNGTGGTCGNCGNGTCGGCGATCCCGTCGTGGCGGACGTCGNGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGC TGGTGGTCCCCG AGGGG AGCCACG NGATGCGGC TCG GGAACGAGGCGTC ]
[+] EMBL OSS1373A [ AACT CAG AG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTC GCGC ANT CACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGC ]
[+] EMBL OSS2396A [ AACT CAG AG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCNGNGGCGAGCGGAACGGCGCTC GCNC AAT CACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGC ]
[+] EMBL OSC450 [ AG AG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGNTCGGCGC CAT CACCGACGGGCTGNTGGCGAACGGCAACTTCGA ]
[+] EMBL AU030920 [ AG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCNGCGGCGAGCGGAACGGCGCTC GCNC AGT CACCGACGGGCTGCTGGCGAACNGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTGCGCGGGACGCGGGTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACNTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATNGTGC TGGTGGTCCCCG AGGGG AGCCACG CGGTGCGGC TCG GGAACNAGG ]
[+] EMBL OSS4165A [ an gga nG CT CT CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGGCGAGCGGAACGGCGCTC G GC AGTGCACCGACGGGCTNCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCG CGTCGCAGCTNCGCGGGACGGTGGTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGC TGGTGGTCCCCG AGGGG AGCCACG CNGTGCGGC TCG NGAACGAGGCGTCGATCCGNCAAC ]
[+] EMBL OSS4528A [ CTT CCACCGGT CATCT CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGNGGCGAGCGGAACGGCGCTC GCGCAATT CACCGACGGGCTGCTGGCGAACGGCAACTTCNAGCGCGGGCCGGCGCCGTCGCAGCTGCGCGGAACGNGGTTGGTCGGCGCGTCGGCNATCCCGTCGTGGCGGACGTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTTCTTGGTGGTNCCCGAAGGGGAAGCCANG CGGTTCGGC TTG GGAACAAG ]
[+] EMBL OSS3449A [ CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCNNNNACGAGCGGAACGGCGCTC NCGC ANTNCACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGNCGACGTCGCAGCTGCGCGGGACGGGGTTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGNGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGC TGGTGGTCCCCG AGGNG AGCCACGNAGTTGCGGCTTCGTGGAACNAGGCGTCGATCCGNCAAGCGGG]
[+] EMBL OSS3231A [ CCT CCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCGTCGCTGCTGCTGCTAATGGTGGTGCTCTGCGCGGCGNCGAGCGGAACGGCGCTC GCCC ANTNCACCGACGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGNCGTCGCAGCTGCGCGGGAC GGNGTGGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGAGTACATCCCGTCGGGGAGGAAGAAGGGGGACATGGTGC TGGTGGTCCCCG AGGGG AGGCACG NGGTGCGGCTTCG GGAACGAGGC ]
consensusID : consensus_15315#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 292 fasta sequence
[CCTCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCNTCGCTGCTGCTGCTAATNGTGGTGCTCTGCGNGGNGGCNAGCGGAACGGCGCTCGCGCATCACCNACGGGNTGCTGGCNAACGGNAACTTCAAGCGCGGGCCGGCGCCGTCNCAGCTGCNCGGAACGGGNNTGGTCGGCGCTTCGGCAATCCCTTCTTGGCGGACGTCGGGTTTCTTGGAGTACATCCCGTCGGGAAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCNAGGGNAGCCACGCGGTTGCG]
[+] EMBL OSS3637A [CCTCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGCTCGGCNTCGCTGCTGCTGCTAATNGTGGTGCTCTGCGNGGNGGCNAGCGGAACGGCGCTCGCGCATCACCNACGGGNTGCTGGCNAACGGNAACTTCAAGCGCGGGCCGGCGCCGTCNCAGCTGCNCGGAACGGGNNTGGTCGGCGCTTCGGCAATCCCTTCTTGGCGGACGTCGGGTTTCTTGGAGTACATCCCGTCGGGAAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCNAGGGNAGCCACGCGGTTGCG]
consensusID : consensus_15315#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 224 fasta sequence
[CAAGAACTCAGAGCTCTCTTCCACCGGTCATCTCCTCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGNTCGGCGTCGCTGCTGCTGCTAATGGTGGTACTCTGCGCGGNGGCGAGCGGAACGGNGNTCGCGACAGTCACCGACGGGNTANTGGCGAACGGAAACTTCGAGCGCGGGCCGTCGNCGTNGTAGNTGCNCGGNACGGGGGTTGGTCGGCGCATCGG]
[+] EMBL OSS1573A [CAAGAACTCAGAGCTCTCTTCCACCGGTCATCTCCTCCATCTCCGGCCAGGCTAGCCATGGCGGCCGGNTCGGCGTCGCTGCTGCTGCTAATGGTGGTACTCTGCGCGGNGGCGAGCGGAACGGNGNTCGCGACAGTCACCGACGGGNTANTGGCGAACGGAAACTTCGAGCGCGGGCCGTCGNCGTNGTAGNTGCNCGGNACGGGGGTTGGTCGGCGCATCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15315#2 --------CCAAGAACTCAGAGCTCTCTTCCACCGGTCATC-------TCCTCCATCTCC 45
consensus_15315#4 ---------CAAGAACTCAGAGCTCTCTTCCACCGGTCATC-------TCCTCCATCTCC 44
consensus_15315#3 -------------------------------------------------CCTCCATCTCC 11
consensus_15315#0 CACCATTTCCAAGAACTCAGAGCTCTCTTCCACCGGTCATC-------TCCTCCATCTCC 53
consensus_15315#1 ---ATCGCGCAGGTGATCCGCACCGTCCCCGGGAGGCAGTACGCGCTGTCGTTCACCGTC 57
* * ** * *
consensus_15315#2 GGCCAGGCTAGCCATGGCGGCC--GGCTCGGCGTCGCTGCTGCTGCTAAT---GGTGGTG 100
consensus_15315#4 GGCCAGGCTAGCCATGGCGGCC--GGNTCGGCGTCGCTGCTGCTGCTAAT---GGTGGTA 99
consensus_15315#3 GGCCAGGCTAGCCATGGCGGCC--GGCTCGGCNTCGCTGCTGCTGCTAAT---NGTGGTG 66
consensus_15315#0 GGCCAGGCTAGCCATGGCGGCC--GGCTCGGCGTCGCTGCTGCTGCTAAT---GGTGGTG 108
consensus_15315#1 GGCGACGCCAGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAGGGAG 117
*** * ** *** * *** ** ** *** * ** * * **
consensus_15315#2 CTCTGCGCGGCGGCGAGCGGAACGGC-GCTCGCG-C--ANTCACCGACGG---------- 146
consensus_15315#4 CTCTGCGCGGNGGCGAGCGGAACGGN-GNTCGCGAC--AGTCACCGACGG---------- 146
consensus_15315#3 CTCTGCGNGGNGGCNAGCGGAACGGC-GCTCGCG----CATCACCNACGG---------- 111
consensus_15315#0 CTCTGCGCGGCGGCGAGCGGAACGGC-GCTCGCCGC--CATCACCGACGGTAACGCGCAT 165
consensus_15315#1 TCCACCAGGGTGGCGCACGAGTCGGCTGGCCGCGGCGGCGCCGCCAAGCGCGCCGTGCTG 177
* * ** *** ** *** * *** * ** * *
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 GCCTTTTGGTTTGGTTTGATGCGTTCGTTTCCGCGTGTGTAACGCTCGCCGGCGGCGAGG 225
consensus_15315#1 CCGTTCCGCGCCGCCGCGGCGCGCACACACGCGTCGTGTTCTTCAGCTCGTTCTACAGCA 237
consensus_15315#2 ------GCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTGCG--C 198
consensus_15315#4 ------GNTANTGGCGAACGGAAACTTCGAGCGCGGGCCGTCGNCGTNGTAGNTGCN--C 198
consensus_15315#3 ------GNTGCTGGCNAACGGNAACTTCAAGCGCGGGCCGGCGCCGTCNCAGCTGCN--C 163
consensus_15315#0 TGCAGGGCTGCTGGCGAACGGCAACTTCGAGCGCGGGCCGGCGCCGTCGCAGCTGCG--C 283
consensus_15315#1 CCAGG-AGCGACGACATGAGCTCGCTCTGCGGGCCGGTGATCGACGACGTCGCCGTCGTC 296
* * * ** * ** ** ** ** * * *
consensus_15315#2 GGGACGGGGGT-GGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGA 257
consensus_15315#4 GGNACGGGGGTTGGTCGGCGCATCGG---------------------------------- 224
consensus_15315#3 GGAACGGGNNT-GGTCGGCGCTTCGGCAATCCCTTCTTGGCGGACGTCGGGTTTCTTGGA 222
consensus_15315#0 GGGACGCGGGT-GGTCGGCGCGTCGGCGATCCCGTCGTGGCGGACGTCGGGGTTCGTGGA 342
consensus_15315#1 AGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGAGCTAGGGTCTAGCTAGCGCCATTGC 356
* * * * **** *
consensus_15315#2 GTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCGAGGGGAGCCA 317
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 GTACATCCCGTCGGGAAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCNAGGGNAGCCA 282
consensus_15315#0 GTACATCCCGTCGGGGAGGAAGCAGGGGGACATGGTGCTGGTGGTCCCCGAGGGGAGCCA 402
consensus_15315#1 CGCGATGTCGT--ACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAA 414
consensus_15315#2 CGCGGTGCGGCTCGGGAACGAGGCGTCGATCCGNCAACCGGG------------------ 359
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 CGCGGTTGCG-------------------------------------------------- 292
consensus_15315#0 CGCGGTGCGGCTCGGGAACGAGGCGTCGATCCGGCAGCGGCTCGCCGGCGCGGCGCGCGG 462
consensus_15315#1 ATTGGTCGATCGAGAATAGCGGCCGCGAATTCGCGGCCGCTAGCGGC------------- 461
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CGCGCGGTACGCGCTCACGTTCAGCGCGGCGCGGACGTGCGCGCAGGCGGAGCGGCTGAA 522
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CGTGTCGGCGTCGGGGCAGTGGGCGGTGCTCCCCATGCAGACCATGTACAGCAGCAACGG 582
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CTGGGACTCGTACGCCTGGGCCTGGGATGCCGCCGCCGACGCGTTCGACGTCGTCATCCA 642
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CAACCCCGGCGTCACCGAGGACCCCGCCTGCGGCCCCCTCATCGACTCCGTCGCCATCCG 702
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CACCCTCAACCCTCCTCGCCGCACCAACAAGAACCTGGTGAAGAACGGGGACTTCGAGGA 762
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 GGGCCCGTACATCATCCCGGGGACTAGGTGGGGGGTGCTGATCCCGTCCATGGTGGTGGA 822
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CGAGCACTCGCCGCTGCCGGGGTGGATGGTGGAGTCGCTCAAGGCGGTGAAGTACATCGA 882
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CAGCGACCACTTCGCGGTGCCGCGCGGGCGGCGCTCTGTCGAGCTGCTGGCGGGGCGGGA 942
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 GAGCGCGATCGCGCAGGTGATCCGCACCGTCCCCGGGAGGCAGTACGCGCTGTCGTTCAC 1002
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CGTCGGCGACGCCAGCAACGGCTGCGAGGGGTCGCTGGTGGTGGAGGCGTACGCCGGGAG 1062
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 GGAGTCCACCAGGGTGGCGCACGAGTCGGCTGGCCGCGGCGGCGCCGCCAAGCGCGCCGT 1122
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 GCTGCCGTTCCGCGCCGCCGCGGCGCGCACCCGCGTCGTGTTCTTCAGCTCGTTCTACAG 1182
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CACCAGGAGCGACGACATGAGCTCGCTCTGCGGGCCGGTGATCGACGACGTCGCCGTCGT 1242
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CAGCGTGCGCGCGCGGCGGCCGGCGGCGAAGCGCGGCTAGGGTCTAGCTAGCGCCATTGC 1302
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 CGCGATGTCGTACTACTATTTAGTTGTTGATTGTTTCGTTTGTATGTAAGACCAAGAAAT 1362
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ------------------------------------------------------------
consensus_15315#4 ------------------------------------------------------------
consensus_15315#3 ------------------------------------------------------------
consensus_15315#0 TGGTCGATCGAGAATATATATAATTATTATTATTTTGTCGGTTCCTGGTATATATTTGAA 1422
consensus_15315#1 ------------------------------------------------------------
consensus_15315#2 ----------------------------------------------------------
consensus_15315#4 ----------------------------------------------------------
consensus_15315#3 ----------------------------------------------------------
consensus_15315#0 TTTTGCAGTTTAAGCATGCGTTAGAAAATCAGTTCGACTGAATAATAATACAATATTT 1480
consensus_15315#1 ----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||