These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15320#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1008 fasta sequence [GACCTGACTGGACTGAGGAGTAGAAAATCTTGCTTATATTTTTGCCAAAAAAAAAGAAAAAAAAAAGAGAGAAAGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT--CCAGG-TTGCT-GTGGGCTT--CCCGCGCCGCCTCCTACCTCAAGATCT-CCACTTTCCCCAGGG-CCTTCTCC--ACCGTGCTGAAGGATCTG-AAGTATGCTGACACT-CAT-GAAT-GGGTTA-A-GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG-CCCAGCACCATTTGGGTGA-TGTTGTGTATGT-GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC-TTTGGTGC-TGTTG-AAAGTGTGAAGGCAACCAGCGAT-ATCT-AC-TC-TCCAGTATCTGGAGA-GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA-CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA-GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTTCGTTTAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF321207 [GACCTGACTGGACTGAGGAGTAGAAAATCTTGCTTATATTTTTGCCAAAAAAAAAGAAAAAAAAAAGAGAGAAAGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGT ] [+] EMBL CF301592 [ AGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTG ] [+] EMBL CF310642 [ GGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTANGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGACAGCAAGCATT ] [+] EMBL AK058912 [ GCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTTCG ] [+] EMBL CF337680 [ GCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCA G TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AA TATGCTGACACT CAT GAAT GGGTTA A GTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TC ] [+] EMBL CF291631 [ aggagtaaaAGA AAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGA ] [+] EMBL OSS1529A [ GAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTTGGTGA TGTTGTGTATTT GGAGCTTTCAGAAGTT ] [+] EMBL AK100893 [ GAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTT ] [+] EMBL C97149 [ AGACAGACAGAGTGCGGCG CGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGG CGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGTNGGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAACTTTTGGTGCTTGTTGAAAAGTGTGAAGGCAACCAGCGAT ATCT ACTTT TCCAGTATTTGGAGA GGTTGTT ] [+] EMBL CF322243 [ CAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCATGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTANGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCGAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGAT ] [+] EMBL C26203 [ AGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TNTTG AAAGTGTGAAGG AACCAGCGAT ATCT AC TCTTCCAGTATCTGGAGAGGGTGGTTGCAGTGAACGATGGNCTAGGCGATGNACCTGGATTGGNTAATA CAAGTCCATACGA ] [+] EMBL CF279355 [ TGCGGCGCCGAGGAGGAGAGGGGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCT TCCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTATATGGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCAT ] [+] EMBL CB000133 [ AGAGGAGCAATAATCCAATTCCAATCCATTCCCCCTCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGAC ] [+] EMBL OSR04591A [ ccgATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTNTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCTAAC TC TCCAGTATCTGGAGA GGT ] [+] EMBL AU100677 [ cCCATGGCCCCCTTCCCAGGTTTGCTNTTGGGCTTNCCCCGGNCGGCTTCNTACCTCANGATCTCCCATTTTCCCCAGGGCCCTTNTCCCNCCCTTGCTGAAGGATCTGAAAGTATGCTGACACTCCATGGAATGGGGTTA A GGTTGAGGNTGATTCGGCACCCGTTGGAATTACAGACCATGCCCCAGCCCCATTTGGNTGANTGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTTCGTTTAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF279354 [ ACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAAaaaaaa ] [-] EMBL CF291630 [ GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGATAATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAaaaaaaaaa ] [-] EMBL CF322244 [ CATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCGAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACAAATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTAaaaaa ] [+] EMBL AU031674 [ GAACCTGGATTGGTTAATACCAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATNGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAAaaaaa ] [+] EMBL BI807128 [ AAGAAGATAGCAAGCATTGAAC AATACCACGTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATC ACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCAC AAGAGTTGC AACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTC ATTGTAaaaaaa ] consensusID : consensus_15320#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence [AGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTTTGCGAGGAAGAAGATAGCAAGCCTTGAACAAATACCAGTGACTTGTGATTTGCAAAGAATGCGCCTTGACCCTTTTGTCAAAGCTTGTGATGTGCTATCGAGCACTTATCTTTACCCCCGGCTGGTCCTGAAATCAGCCCCGGTCCACACATGAATAAATTAGTGGTGGCATTGCCTTTTCCCCAAAAAGTTGCAAACTTTGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGGATCGGGTGATTTCATTTTCAATTGTAGCTTTGCCGCCTTTGCTCCGTTTATTTTTGAAACGTGTGCTTCGTTTACTTTTGAATCGTGTGTTCTTGGTGTTTACGAGCCTGCATTATGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF337681 [AGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTTTGCGAGGAAGAAGATAGCAAGCCTTGAACAAATACCAGTGACTTGTGATTTGCAAAGAATGCGCCTTGACCCTTTTGTCAAAGCTTGTGATGTGCTATCGAGCACTTATCTTTACCCCCGGCTGGTCCTGAAATCAGCCCCGGTCCACACATGAATAAATTAGTGGTGGCATTGCCTTTTCCCCAAAAAGTTGCAAACTTTGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGGATCGGGTGATTTCATTTTCAATTGTAGCTTTGCCGCCTTTGCTCCGTTTATTTTTGAAACGTGTGCTTCGTTTACTTTTGAATCGTGTGTTCTTGGTGTTTACGAGCCTGCATTATGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15320#0 GACCTGACTGGACTGAGGAGTAGAAAATCTTGCTTATATTTTTGCCAAAAAAAAAGAAAA 60 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 AAAAAAGAGAGAAAGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAG 120 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 AGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATA 180 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 ATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCTCC 240 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 AGGTTGCTGTGGGCTTCCCGCGCCGCCTCCTACCTCAAGATCTCCACTTTCCCCAGGGCC 300 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 TTCTCCACCGTGCTGAAGGATCTGAAGTATGCTGACACTCATGAATGGGTTAAGGTTGAG 360 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 GGTGATTCGGCAACCGTTGGAATTACAGACCATGCCCAGCACCATTTGGGTGATGTTGTG 420 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 TATGTGGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAACTTTGGTGCTGTT 480 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 GAAAGTGTGAAGGCAACCAGCGATATCTACTCTCCAGTATCTGGAGAGGTGGTTGCAGTG 540 consensus_15320#1 ------------------------------------------------------------ consensus_15320#0 AACGATGGACTAGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGG 600 consensus_15320#1 -----------AGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGG 49 ************************************************* consensus_15320#0 ATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAA 660 consensus_15320#1 ATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAA 109 ************************************************************ consensus_15320#0 TACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCAGTGACTTGTGA 720 consensus_15320#1 TACTCGAAATTTTGCGAGGAAGAAGATAGCAAGCCTTGAACAAATACCAGTGACTTGTGA 169 *********** ********************** ************************* consensus_15320#0 TCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTA 780 consensus_15320#1 TTTGCAAAGAATGCGCCTTGACCCTTTTGTCAAAGCTTGTGATGTGCTATCGAGCACTTA 229 * ******************************* ************************** consensus_15320#0 TCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTG 840 consensus_15320#1 TCTTTACCCCCGGCTGGTCCTGAAATCAGCCCCGGTCCACACATGAATAAATTAGTGGTG 289 ******** ******* ************* *** ** ******************* ** consensus_15320#0 GCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTT 900 consensus_15320#1 GCATTGCCTTTTCCCCAAAAAGTTGCAAACTTTGAACCTGTAAATGACATGAGTTTCGTT 349 ********* **** **** ************ *************************** consensus_15320#0 ATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGT 960 consensus_15320#1 ATTTCTTTGTAGGATCGGGTGATTTCATTTTCAATTGTAGCTTTGCCGCCTTTGCTCCGT 409 ************ **** ********** ************* ******** ******** consensus_15320#0 TTATTTCTGAAACGTGTGCTTCGTTTAAAAAAAAAAAAAAAAAAAAAA------------ 1008 consensus_15320#1 TTATTTTTGAAACGTGTGCTTCGTTTACTTTTGAATCGTGTGTTCTTGGTGTTTACGAGC 469 ****** ******************** ** consensus_15320#0 ---------------------------------------- consensus_15320#1 CTGCATTATGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAA 509 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||