These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15375#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1930 fasta sequence [CTTCGTCCCACACTTCAACGCCTCGCGATCGATCGCCCCAAATCCCCGCCGCCGCCGCCGCCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGGGCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGGCCGGCGAGGAGGA-GGAGGAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCGCGGGGGAGGGAGGCGGGGGATGGCGGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCCGTCAACGTGCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGGGTGACTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTTTGC-AGCAC-AAGGGGATGTGAACATCAATGGATCACTGGACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCA-CTGAAGCAGAACTGTGATATCA-AAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCTCCTGACCCAAATCCTGGTGAGGGATCCAGCAGCA-ATGAGATCAT-TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATACAATAACAAATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCAATTCTTTGCAAA-TGCATTGTTCAAAAAAAAAA] [+] EMBL AK066720 [CTTCGTCCCACACTTCAACGCCTCGCGATCGATCGCCCCAAATCCCCGCCGCCGCCGCCGCCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGGGCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGGCCGGCGAGGAGGA GGAGGAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCGCGGGGGAGGGAGGCGGGGGATGGCGGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCCGTCAACGTGCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGG CTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGGAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTTTGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCA CTGAAGCAGAACTGTGATATCA AAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCACCTGACCCAAATCCTGGTGAGGGATCCAGCAGCA ATGAGATCAT TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATTATTGGAACAGCTGCTCAAAGACGATAATGTAGATACAGTAACAAATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCAATTCTTTGCAAA Tt ] [+] EMBL CB660728 [ ACGCCTCGCGATCGATCGCCCCAAATCCCCGCCGCCGCCGCCGCCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGGGCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGGCCGGCGAGGAGGA GGAGGAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCGCGGGGGAGGGAGGCGGGGGATGGCGGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCCGTCAACGTGCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGGGTGACTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACAT ] [+] EMBL CB675942 [ CGCCTCGCGATCGATCGCCCCAAATCCCCGCCGCCGCCGCCGCCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGGGCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGGCCGGCGAGGAGGA GGAGGAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCGCGGGGGAGGGAGGCGGGGGATGGCGGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCCGTCAACGTGCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGG CTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATAT ] [+] EMBL CB639925 [ CTCGCGATCGATCGCCCCAAATCCCCGCCGCCGCCGCCGCCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGGGCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGGCCGGCGAGGAGGATGTTTGATGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCG ] [+] EMBL CB666484 [ GCCGCCGTCAACGTGCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGGGTGACTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTACTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTAT ] [+] EMBL CB673420 [ ACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGGGTGACTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAAC ] [+] EMBL CB624114 [ AAGAAAACATTTTCAGCGTTTCTTCAGTTTGGCGGGTACAATCAAGAAGACATTCTCATTCACAAGGCTAGGGCGAGGGTGACTTATGCAACCTTCTTTCGCGCTAGTGCGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATCGCTAACCTTGCTAAGCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTAACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTGCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTGACAGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACGGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGG ] [+] EMBL CF326670 [ AGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGG CTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGA ] [+] EMBL CA882894 [ CCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCAATTCTGGCATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGCGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAG ] [+] EMBL BE230751 [ cgagATCAACAGAAATGATGTGGT CCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGGAGCCTGTAACAAATGGGCTAAGCACAGRCTKCAACCMGCATCAAACGGACCTCGTTGCTAATACAGAGCARGACTTTTCAGCTGTATCAGTTGTTACCYCTGRAGAGAAGAKTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTC ] [-] EMBL CB624115 [ TAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTGACAGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACGGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAGCAGACCTTGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTTCTATCTAGCAACGATAATGTTATCAGTATAAAGTCTGTTGCTGGATCAGGCTTGGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGAAACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCA CTGAAGCAGAACGGTGATAGCA AAAACAAGCTGAAAGAACCGCTACCGACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCTCCTGACCCAAATCCCGGTGAGGGATCCAGCAGCA ATGAGATCAT TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTATATGCCTAGTTACATAAGCACGATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATACAATAACAAATGATTTGTAAATTAAG GGAAACTCAATAAATTATTAATCCGATTCTTTG ] [-] EMBL CB660729 [ AAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGTTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTTTGC AGCACNAAGGGGATGTGAACATC ] [-] EMBL CB675943 [ CAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTTTGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCA CTGAAGCAGAACTGTGATATCA AAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCACCTGACCCAAATCCTGGTGAGGGATCCAGCAGCA ATGAGATCAT TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATTATTGGAACAGCTGCTCAAAGACGATAATGTAGATACAATAACAAATGATTTGTAAATTAAGTAAAAACTCAATAAATTATTAATCCA ] [-] EMBL CB666485 [ CAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTTTGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCA CTGAAGCAGAACTGTGATATCA AAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCACCTGACCCAAATCCTGGTGAGGGATCCAGCAGCA ATGAGATCAT TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATTATTGGAACAGCTGCTCAAAGACGATAATGTAGATACAATAACAAATGATTTGTTATTTAAG GAAAACTCAATAAATTATTA ] [-] EMBL CB673421 [ AGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTTTGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCA CTGAAGCAGAACTGTGATATCA AAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCACCTGACCCAAATCCTGGTGAGGGATCCAGCAGCA ATGAGATCAT TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATTATTGGAACAGCTGCTCAAAGACGATAATGTAGATACAATAACAAATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCA ] [-] EMBL CB668614 [ TCAAACATGTCCCAGAAATCACGCAGCCTGTAACAAATGGGTTAAGCACAGACTGCAACCAGCATCAAACGGACCTAGTTGCTAATACAGAGCAGGACTTTTCAGATGTATCAGTTGTTACCTCGGAAGAAAAGATTGTACTATCTAGCAAGGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGCTCTGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGACTCTGAACAAGATCAATCATCCTGGACAGGGCAGGAGGACCCAGAATCA GTGAAGCAGAAGTGTGATATCA AAGACAAGCGGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTTACATGGTTGCAATGGCCTCTCATGACCCAAATCGTGGTGAGGGATCCAGCAGCA ATGAGATCAT TAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAATCATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATT ] [+] EMBL BI813711 [ ATGTTATCAGTATAAAGTCTGTTGCTGGATCAGGCTTGGCAAGCAC AAGGGGATGTGAACATCAATGGATCACTGGAAACTGAACAAGAACAATCATCCTTGACAGGCCAGGAGGAACCAGAATCACCTGAAGCAGAACGGTGATAGCACAAAACAAGCTGAAAGAACCGCTACCGACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCTCCTGACCCAAATCCCGGTGAGGGATCCAGCAGCA ATGAGATCAT TGGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCCAACATGATAAAGGAGCATTATATGCCTAGTTACATAAGCACGATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATACAATAACAAATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCGATTCTTTGCAAATTGCATTGTTCAAAAAAAAAA] [+] EMBL BM419234 [ TGTTATCAGTATAAAGTCTGTTGCTGGATCAGGCTTGGC AGCAC AAGGGGATGTGAACATCAATGGATCACTGGAAACTGAACAAGAAC ATCATCCTTGACAGGGCAGGAGGAACCAGAATCA CTGAAGCAGAACGGTGATAGCA AAAACAAGCTGAAAGAACCGCTACCGACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCTCCTGACCC AATCCCGGTGAGGGATCCAGCAGCA ATGAGATCAT TGGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCC AACATGATAAAGGAGCATTATATGCCTAGTTACATAAGCACGATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATAC ATAAC AATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCGATTCTTTGCAAT TGCATTGTTCTAAAAAAAA ] [+] EMBL BI812317 [ TGATAGCA AA ACAAGCTGAAAGAACCGCTACCGACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCTCCTGACCC AATCCCGGTGAGGGATCCAGCAGCA ATGAGATCAT TGGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCC AACATGATAAAGGAGCATTATATGCCTAGTTACATAAGCACGATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATACAATAAC AATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCGATTCTTTGCAAAaaaaa ] [+] EMBL BI811738 [ GAGGGATCCAGCAGCATATGAGATCATGTGGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCC AACATGATAAAGGAGCATTATATGCCTAGTTACATAAGCACGATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATACAATAAC AATGATTTGTAAATTATGTAAAAACTCAATAAATTATTAAaaaaa ] consensusID : consensus_15375#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence [TTTTGTATAGCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGGTAATACCTCTTAGGCACTTTAATTTCTACTATTTAAATGATTGCTTCTGTCACTTGTCACTGGATCCTAAACTAGCACAATGATAATTNTGCGTCCTTAAGCCACATGTGAACCCAGCACGAGT] [+] EMBL CF323772 [TTTTGTATAGCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGGTAATACCTCTTAGGCACTTTAATTTCTACTATTTAAATGATTGCTTCTGTCACTTGTCACTGGATCCTAAACTAGCACAATGATAATTNTGCGTCCTTAAGCCACATGTGAACCCAGCACGAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15375#0 CTTCGTCCCACACTTCAACGCCTCGCGATCGATCGCCCCAAATCCCCGCCGCCGCCGCCG 60 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 CCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGG 120 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGG 180 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 CCGGCGAGGAGGAGGAGGAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCGCGGGGGA 240 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GGGAGGCGGGGGATGGCGGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCCGTCAACGT 300 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCG 360 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTG 420 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 ATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACA 480 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 CTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACAT 540 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 TTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTA 600 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GGGCGAGGGTGACTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGC 660 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 TTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCT 720 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTA 780 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCC 840 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 CATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCA 900 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 ATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCA 960 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 TCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCG 1020 consensus_15375#1 ------------------TTTTGTATAGCTGCCTGTATGTCATGGGAGCTGGCGGAGTCG 42 *** * ******************************** consensus_15375#0 GGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAA 1080 consensus_15375#1 GGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAA 102 ************************************************************ consensus_15375#0 GTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAG 1140 consensus_15375#1 GTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAG 162 ************************************************************ consensus_15375#0 GATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCT 1200 consensus_15375#1 GATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCT 222 ************************************************************ consensus_15375#0 CATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCT 1260 consensus_15375#1 CATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCT 282 ************************************************************ consensus_15375#0 GAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACA 1320 consensus_15375#1 GAGGTAATACCTCT-TAGGCACTTTAATTTCTACTATTTA-AATGATTGCTTCTGTCAC- 339 *** * * * * * ** * * * ** * ** *** consensus_15375#0 GACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTA 1380 consensus_15375#1 --TTGTCACTGGATCCTAAACTAGCACAATGATAATTNTGCGT-----CCTTAAGCCACA 392 ** ** * * ** * * * ** **** * * ** *** * consensus_15375#0 TCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAGTACA 1440 consensus_15375#1 T-----GTGAACCCAGCACGAGT------------------------------------- 410 * ** * * * * * * consensus_15375#0 AAGTCTGTTGCTGGATCAGGCTTTGCAGCACAAGGGGATGTGAACATCAATGGATCACTG 1500 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCACTGAAGCAG 1560 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 AACTGTGATATCAAAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTT 1620 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 TTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCTCCTGACCCAAATCCTGGT 1680 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 GAGGGATCCAGCAGCAATGAGATCATTAGCATTTATGAAACGCCAAGAGATTTGTATGGG 1740 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 AAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACA 1800 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 ATGGAATCATTATTGGAACAGCTGCTCAAGGACGATAATGTAGATACAATAACAAATGAT 1860 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 TTGTAAATTATGTAAAAACTCAATAAATTATTAATCCAATTCTTTGCAAATGCATTGTTC 1920 consensus_15375#1 ------------------------------------------------------------ consensus_15375#0 AAAAAAAAAA 1930 consensus_15375#1 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||