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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15392#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 897 fasta sequence
[AGAGACTCCTACTCCTAGATAGATATCGATAGAGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG-CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG-CGGAGGCCCTCAGGGCA-G-GCAC-ATGC-GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC-GCAAGGAACGACCA-GGTGGA-TGTAATGAA-GGC-T-GGGGCT-AGTG-TTGACCTGAG-GAA-TGCCAAGATTGATA-TG-TTC-AA-GGGGTCGATGCGGCTT-GCGGT-GGACAAGTGGGGG-ATTGTGAAAGCTG-CTGAAAGCCCAGCTGATTTCACAGTGAAGG-AGGATAACAACATGTCCTTGATCG-AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG-AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG-AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTATATA---AAAAAACTGGTGGTGTTTTGCATGGGCACTAAAAAAGAGAGTGCTGTGCTTACTGGCGATGGCGATGATAATAATCAACTGAAGCAGCAATGGTGATTGCTGTGCACTAAAAAA]
[+] EMBL OSC958 [AGAGACTCCTACTCCTAGATAGATATCGATAGAGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCTC AAGGGAA GNGCAC ATGC GGATTGCCGAGTNCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAA GAACGACCAGGGTGGA TGTAATGAA GGCTT GGGGCT AG ]
[+] EMBL OSS4384A [ CTCCTACTCCTAGATAGATATCGATAGAGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCNCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGNTCCGCCCTGGGACCCATGG CCACAACCTTNTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGGCCTCAGGGCAGG GCAC ATGCGGGATTGNCGAGTGGCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGNCCA GGTGGATTGTAATGAAGGGT T GGGGTT AGTGNTTGACCTGAG GAATTGCCAAGATTGATATTG TT ]
[+] EMBL OSS4376A [ CTCCTACTCCTAGATAGATATCGATAGAGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAA GAACGACCA GGTGGA TGTAATGAA GGT T GGGGCT AGTG TTGACCTGAG GAA TGCAAAGATTGATA TG TTCAAA GGGGTCGATGCGGCTT NCGGT GGACAA ]
[+] EMBL CA755623 [ CCTACTCCTAGATAGATATCGATAGAGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCNAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAA CAATTCATCTT ACCNAGCAAT AGTG ]
[+] EMBL AK121085 [ CGATAGAGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTT ]
[+] EMBL CF309366 [ AGATAAAATCCCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGGNCGGAGGCCCTCAGGGCA G GCACNATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCT AGTTTG ]
[+] EMBL AU092614 [ CCCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GG T GGGG T AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATT ]
[+] EMBL AU057781 [ CCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC TNGGGGCTAAGTG TTGACCTGAGNGAA TGCCAAGATTGATA TGTTTC AA GGGGTCGATGCGGCTTNGCGGT GGACAAGTGGGGGNATTGTGAAAGCNG CTGAAAGCCCAGCTGNTTTCACAGTGANGG AGGATAACAAna ]
[+] EMBL AU057775 [ CCCACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGTGGGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGGAAGGATAACAACATGTCCTTGATCGAAGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGGAAATCATGGTTGATGGGTTTTTGNTTATGTATTTGGAGATCCGGANGTTGAAGTAGTGTCATNTTTAATTAATTAATTATCCGACAATTGT ]
[+] EMBL CF319451 [ tagaaaACCCCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA CGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCT ]
[+] EMBL OS1321610 [ CCACCCACCTTGCGCTTTCTGCTCCGCCCGCAATTTCGCCGTAGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGG CCTCAGGGCA G GCAC ATGC GGATTGCCGAG ]
[+] EMBL C27436 [ GCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGG CCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AAGGGGGTCGATGCGGCTT TCG ]
[+] EMBL CB681665 [ GTCCTCCTCCCCGGCCGCTTCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACCAAGGTCGACCAGCTCCGCCCTGGGACCCATGG CCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGG CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGC ]
[+] EMBL AU108930 [ CAAGGTCGACCAGCTCCGCCCTGGGACCCATGGCCCACAACCTTCTCCTCAAGGTCGTCGACTCCAAGATGGTCCTTCAGAGGGN CGGAGGCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTAaaaaa ]
[+] EMBL BI796866 [ TCGTCGACTCCAAGATGGTCCTTCAGAGGGC CGGA GCCCTCAGGGCA G GCAC ATGC GGATTGCCGAGTGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACCAGCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAG TGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGCGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTATATATGTAAAAA ]
[+] EMBL AU057776 [ CGATGAAACCGGCATTATTGTCTTCACC GCAAGGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTATAAA AAAAAA ]
[+] EMBL AU174334 [ GGAACGACCA GGTGGA TGTAATGAA GGC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTAaaaa ]
[-] EMBL CF319452 [ GC T GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTG CTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTATATATGTATGCTACTGGTGGTGTTTTGCATGGGCACTAAAAAA ]
[+] EMBL AU108944 [ GGGGCT AGTG TTGACCTGAG GAA TGCCAAGATTGATA TG TTC AA GGGGTCGATGCGGCTT GCGGT GGACAAGTGGGGG ATTGTGAAAGCTGCCTGAAAGCCCAGCTGATTTCACAGTGAAGG AGGATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACCAAGCAATAAGTGG AATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTATATATGTATGCTACTGGTGGTGTTTTGCATGGGCACTACAAGAGAGAGTGCTGTGCTTACTGGCGATGGCGATGATAATAATCAACTGAAGCAGCAATGGTGATTGCTGTGCACTAAAAAA]
[+] EMBL AU057782 [ ATAACAACATGTCCTTGATCG AGTTTGAGCTGGTGACAGTGGTGGAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAANTCATCTTAACCAAGCAATAAGTGG AATCATGGNTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGTTG AGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTAGTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTATAAA AAAAAA ]
consensusID : consensus_15392#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence
[AGAATAGTCTCCTGTAGTGGTCCTCTGTTGGCCCTGTAAAAATAATGCATCATCGAGTTGCTTATTCCCGTACTATATATGTATGCTACTGGTGGTGTTTTGCATGGGCCCTCCAAAAAAAAGTGCTGTGTTTACTGGCGATGGCGATGATAATATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF309367 [AGAATAGTCTCCTGTAGTGGTCCTCTGTTGGCCCTGTAAAAATAATGCATCATCGAGTTGCTTATTCCCGTACTATATATGTATGCTACTGGTGGTGTTTTGCATGGGCCCTCCAAAAAAAAGTGCTGTGTTTACTGGCGATGGCGATGATAATATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15392#0 AGAGACTCCTACTCCTAGATAGATATCGATAGAGATAAAATCCCCCACCCCACCCACCTT 60
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 GCGCTTTCTGCTCCGCCCGCAATTTCGCCGTCGCCGTCGTCGTCCTCCTCCCCGGCCGCT 120
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 TCCCTTCATCCAGGTTCCCCCATGGCGGACTCCGGCGCTCGCAGGCAGCCTAGCTTCACC 180
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 AAGGTCGACCAGCTCCGCCCTGGGACCCATGGCCACAACCTTCTCCTCAAGGTCGTCGAC 240
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 TCCAAGATGGTCCTTCAGAGGGGCGGAGGCCCTCAGGGCAGGCACATGCGGATTGCCGAG 300
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 TGCCTCGTCGGCGATGAAACCGGCATTATTGTCTTCACCGCAAGGAACGACCAGGTGGAT 360
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 GTAATGAAGGCTGGGGCTAGTGTTGACCTGAGGAATGCCAAGATTGATATGTTCAAGGGG 420
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 TCGATGCGGCTTGCGGTGGACAAGTGGGGGATTGTGAAAGCTGCTGAAAGCCCAGCTGAT 480
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 TTCACAGTGAAGGAGGATAACAACATGTCCTTGATCGAGTTTGAGCTGGTGACAGTGGTG 540
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 GAGTGAGAGCCTTTTTTGGTGTAGGAGGACGGTATGTGGTAGAACCAATTCATCTTAACC 600
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 AAGCAATAAGTGGAATCATGGTTGATGGGTTTTTGTTTATGTATTTGGAGATCCGGAGGT 660
consensus_15392#1 ------------------------------------------------------------
consensus_15392#0 TGAGTAGTGTCATCTTTAATTAATTAATTATCCGACAATTGTTGAGAATAGTCTCCTGTA 720
consensus_15392#1 --------------------------------------------AGAATAGTCTCCTGTA 16
****************
consensus_15392#0 GTAGTCCTCTGTTGGACCTGTTATGATGATGCATCATCGAGTTGCTTATTGCCGTACTAT 780
consensus_15392#1 GTGGTCCTCTGTTGGCCCTGTAAAAATAATGCATCATCGAGTTGCTTATTCCCGTACTAT 76
** ************ ***** * ** ********************** *********
consensus_15392#0 ATAAAAAA---ACTGGTGGTGTTTTGCATGGGCACTAAAAAAGAGAGTGCTGTGCTTACT 837
consensus_15392#1 ATATGTATGCTACTGGTGGTGTTTTGCATGGGCCCTCCAAAAAAAAGTGCTGTGTTTACT 136
*** * ********************** ** **** * ********* *****
consensus_15392#0 GGCGATGGCGATGATAATAATCAACTGAAGCAGCAATGGTGATTGCTGTGCACTAAAAAA 897
consensus_15392#1 GGCGATGGCGATGATAATATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--- 193
******************* **** ** * ** * * ***
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||