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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1540 cluster # 1540       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1540#0 length = 739 sequences # 2  

consensusID : consensus_1540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 739
fasta sequence
                              [ATGATGATGGATGCATGGATTGGTTGTAAAGTACAACCAACCAATTACTGATTGAAGTATTTTCCACCAAGATCCCTGTATTTATACAGGTTGTCATGGCAGGCATCCATTCCTTCCTTTCTTCCTTCCTTCCTTCCTGCCTTGCCTGCCTATATGTCTGTCTGTCTGTCTATCGATCATCTGTTATGCGGTTTAAGATGAGAATGGTCATTGAATGACTAATACACCATCTGAGCCCTAATTTTATATTTCAAATGTTGAGAATTATTGACAAATGGATCTTTTCTCCATGTACAATCCCTTTCTTTAAACCATAATTCATTTCTTTTCTTAAACAACAGAGCATATGGCTATACTCCACGACATTCTTGATTTGGCACTTCCAATCTTTTTTTTTCCTTTTGACCAAACACTTCCAATCTTTTCAGGTTCTGATCTGTATTTCAAATGGATCTTTATTTTATTAATGTGGCAGCATCATCAGAAGTAATTCTCGGACAGTTTTATAACCTTGCTGATTATTAGTATCGGACAACACTCCAAGCATGAAGCGAATGGTGCTACTTTGTTCAGTTAGCACAAATGATTGATTTATTGAGCTGGAGTACGNTTTGNTATTATAGCAATGCTTTTTAAAGAACATCGCTAGGTTCTTANTAGTACCAAGGATTGGTTTACTCATGCCACTCAATATGACAGGATTCTCATTTATATGGTTTTTGTCATCCAAAAAAAAAAA]

[+] EMBL CA766204             [ATGATGATGGATGCATGGATTGGTTGTAAAGTACAACCAACCAATTACTGATTGAAGTATTTTCCACCAAGATCCCTGTATTTATACAGGTTGTCATGGCAGGCATCCATTCCTTCCTTTCTTCCTTCCTTCCTTCCTGCCTTGCCTGCCTATATGTCTGTCTGTCTGTCTATCGATCATCTGTTATGCGGTTTAAGATGAGAATGGTCATTGAATGACTAATACACCATCTGAGCCCTAATTTTATATTTCAAATGTTGAGAATTATTGACAAATGGATCTTTTCTCCATGTACAATCCCTTTCTTTAAACCATAATTCATTTCTTTTCTTAAACAACAGAGCATATGGCTATACTCCACGACATTCTTGATTTGGCACTTCCAATCTTTTTTTTTCCTTTTGACCAAACACTTCCAATCTTTTCAGGTTCTGATCTGTATTTCAAATGGATCTTTATTTTATTAATGTGGCAGCATCATCAGAAGTAATTCTCGGACAGTTTTATAACCTTGCTGATTATTAGTATCGGACAACACTCCAAGCATGAAGCGAATGGTGCTACTTTGTTCAGTTAGCACAAATGATTGATTTATTGAGCTGGAGTACGNTTTGNTATTATAGCAATGCTTTTTAAAGAACATCGCTAGGTTCTTANTAGTACCAAGGATTGGTTTACTCATGCCACTCAATATGACAGGATTCTCATTTATATGGTTTT                   ]
[-] EMBL CA761693             [                                                                 ACCAAGATCCCTGTATTTATACAGGTTGTCATGGCAGGCATCCATTCCTTCCTTTCTTCCTTCCTTCCTTCCTGCCTTGCCNGCCTATATGTCTGTCTGTCTGTCTATCGATCATCTGTTATGCGGTTTAAGATGAGAATGGCCATTGAATGACTAATACACCATCTGAGCCCTAATTTTATATTTCAAATGTTGAGAATTATTGACAAATGGATCTTTTCTCCATGTACAATCCCTTTCTTTAAACCATAATTCATTTCTTTTCTTAAACAACAGAGCATATGGCTATACTCCACGACATTCTTGATTTGGCACTTCCAATC TTTTTTTTCCTTTTGACCAAACACTTCCAATCTTTTCAGGTTCTGATCTGTATTTCAAATGGATCTTTATTTTATTAATGTGGCAGCATCATCAGAAGTAATTCTCAGACAGTTTTATAACCTTGCTGATTATTAGTATCGGACAACACTCCAAGCATGAAGCGAATGGTGCTACTTTGTTCAGTTAGCACAAATGATTGATTTATTGAGCTGGAGTATGTTCTGTTATTATAGCAATGCTTTTTAAAGAACATCGCTAGTTTCTTATTAGTACCAAGGATTGTTTTACTCATGCAACTCAATATGACAGTATTCTCATTTATATGTTTTTTGTCATCCAAAAAAAAAAA]


>consensus_1540#0 ATGATGATGGATGCATGGATTGGTTGTAAAGTACAACCAACCAATTACTGATTGAAGTAT TTTCCACCAAGATCCCTGTATTTATACAGGTTGTCATGGCAGGCATCCATTCCTTCCTTT CTTCCTTCCTTCCTTCCTGCCTTGCCTGCCTATATGTCTGTCTGTCTGTCTATCGATCAT CTGTTATGCGGTTTAAGATGAGAATGGTCATTGAATGACTAATACACCATCTGAGCCCTA ATTTTATATTTCAAATGTTGAGAATTATTGACAAATGGATCTTTTCTCCATGTACAATCC CTTTCTTTAAACCATAATTCATTTCTTTTCTTAAACAACAGAGCATATGGCTATACTCCA CGACATTCTTGATTTGGCACTTCCAATCTTTTTTTTTCCTTTTGACCAAACACTTCCAAT CTTTTCAGGTTCTGATCTGTATTTCAAATGGATCTTTATTTTATTAATGTGGCAGCATCA TCAGAAGTAATTCTCGGACAGTTTTATAACCTTGCTGATTATTAGTATCGGACAACACTC CAAGCATGAAGCGAATGGTGCTACTTTGTTCAGTTAGCACAAATGATTGATTTATTGAGC TGGAGTACGNTTTGNTATTATAGCAATGCTTTTTAAAGAACATCGCTAGGTTCTTANTAG TACCAAGGATTGGTTTACTCATGCCACTCAATATGACAGGATTCTCATTTATATGGTTTT TGTCATCCAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)