|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15409#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 547 fasta sequence
[CATCGATCTTAATTTCTCTCTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC-AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG-GGCCCCGCCG-A-GGCGCCCGACG-AGGCTTGATCGCCGACGACGAGCGCCGCC-GCGCCGCCGTCCATCGATCTCCAT-ATCCGCCCGTAGCCGCCGGCTATATATAC-ACTCGATTATTTGTTTG-TTTGTTGTT-AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT-AAATTA-GTTTG-TTTTG-TTT-GTTT-AATTTATGCAAGC-TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAAAAAAAAA]
[+] EMBL AK120793 [CATCGATCTTAATTTCTCTCTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAGCGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCGCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTT ]
[+] EMBL C74628 [ ATTTCTCTCTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTNCAGCGGCGCCGGCGG GGCCCCG CG A GGCG CCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC G GCCGNCGTNCATCGATCTTCAT ATCCG CCGTAGCCGCC GNTATATATAC ACTCGATTATTTGTTTG TTGTTGTT AA TCAAG TTGATTGATTTAACC TCGAGTATTT AAA TA GTTTG TTTTG TTT G TT AA TTATG AAAN TGGTGTACT TTTAAG GA TTNTAA TCTTGTGT ]
[+] EMBL C73262 [ TTTCTCTCTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTNAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTNCCGGCGGCGACCGCNTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGCAAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCGCCGAA GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCGCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTTAAATTCAAGTTTGATTGATTTAACCGTCGAGTATCTAAAATAA GTTTG TTTTGTTTT GTTT AANTTATGNAAGC Tt ]
[+] EMBL AU064816 [ CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCGCGA A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GNGCCGCCGTCCATCGATCTTCAT ATCCG CCGTAGCCGCCGGCTATATATAC ANTCGATTATTTGTTTG TTTGTTGTT AATTCAAG ]
[+] EMBL AU064814 [ CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCGCCG A GGCG CCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GGGCCGCCGTNCATCGATCTTCATAATCNGCCCGTAGCCGCCGGTTATATATAC AATCGATTAATTGTTTG TTTNTTGTT AAATC ]
[+] EMBL AU070058 [ CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCG CA A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGNC G GNCGCCGTCCATCGATCTCCAT ATCCGNCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTNATTGATTTAANCGTCGAGTATCT AAATTA GTTTG TTTTG TTT G TT AA TTATGCAAG TGGTGTACTCT TCAGCGATTgt ]
[+] EMBL AU064645 [ CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCGCGA A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC G GNCGCCGTCCATCGATCTTCAT ATCCGCCCGTAGCCGCC GCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTTAAATTCAAGTTTGATTGATTTAACCGTCGAGTATCTNAAATAA GTTTG TTTTG TTT GTTT AATTTATGCAAAG TTGTGTACTCTTTAAG ]
[+] EMBL AU183810 [ CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCGCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCA ]
[+] EMBL AU064615 [ CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTNCAGCGGCGCCGGCGG GGCCCCGCGA A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCGCCGTCCATCGATCTTCAT ATCCG CCGTAGCCGCCGGNTATATATACAATTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCCTCGAGTATCT AAATAA GTTTG TTTTG TTT GTTn ]
[+] EMBL AU165707 [ TTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCGCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAGAAAAA ]
[+] EMBL C73499 [ TCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCNGNGCCGNCGG GGCCCCG CG ANGGCGCCCGACG AGGCTTGATCGCCG ]
[+] EMBL AU094332 [ CATCTCGCTATATACGTGCAATGCCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGT GCGNCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCGCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAAaaaaa ]
[+] EMBL C73218 [ ATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTNCCGGCGGCGACCGCNTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCG CG ANGGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GNGCCGCCGTCCATCGATCTCCAT ATCCGCCCGTANACGCCGGCTATATATAC ACTCGATTATTTGTTTGTTTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATNAGGTTTGTTTTTG TTTGGTTTAAATTTATGCAAACTTGGTGTACTCTTTCAGCGATTTt ]
[+] EMBL C99095 [ CTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG GGCCCCGCCG A GGCGCCCGACG AGGCTTGATCGCCGACGACGAGCGCCGCC GCNCCGCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAA NTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAA C TGGGGGACTCTCTCAGCGAT ]
[+] EMBL AU182878 [ GTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACGAAGGCTTGATCGCCGACGACGAGCGCCGCCGGCGCCCCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAAAAAAAAA]
[+] EMBL AU183811 [ GTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACGAAGGCTTGATCGCCGACGACGAGCGCCGCCGGCGCCCCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAAAAAAAAA]
[+] EMBL AU182888 [ GCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACGAAGGCTTGATCGCCGACGACGAGCGCCGCCGGCGCCCCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAAAAAAAAA]
[+] EMBL AU182967 [ CGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACGAAGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCCCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAAAAAAAAA]
[+] EMBL AU182884 [ CGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGC AACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCG A GGCGCCCGACGAAGGCTTGATCGCCGACGACGAGCGCCGCC GCGCCCCCGTCCATCGATCTCCAT ATCCGCCCGTAGCCGCCGGCTATATATAC ACTCGATTATTTGTTTG TTTGTTGTT AATTCAAGTTTGATTGATTTAACCGTCGAGTATCT AAATTA GTTTG TTTTG TTT GTTT AATTTATGCAAGC TGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGCAAAAAAAAAAAA]
consensusID : consensus_15409#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 513 fasta sequence
[TTTCTCTCTTCATCATCTCGCTATATACGTGCAATGCCGGTGGCNCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCNCCGTGGTGGTGCCGNCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCG-ACG-ACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCNAGGCGCCCGACGAGGCTTGATCGCCGACGACGAGCGCCGCCGCGCCGCCGTCCATCGATCTCCATATCCGCCCGTAGCCGCCGGCTATATATACNCTCGATTATTTGTTTGTTTGTTGTTAATTCAAGTTTGATTGATTTAACCGTCGAGTATCTAAATTAGTTTGTTTTGTTTGTTTAATTTATGCAAGCTGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094180 [TTTCTCTCTTCATCATCTCGCTATATACGTGCAATGCCGGTGGCNCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCNCCGTGGTGGTGCCGNCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCG ACG ACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCNAGGCGCCCGACGAGGCTTGATCGCCGACGACGAGCGCCGCCGCGCCGCCGTCCATCGATCTCCATATCCGCCCGTAGCCGCCGGCTATATATACNCTCGATTATTTGTTTGTTTGTTGTTAATTCAAGTTTGATTGATTTAACCGTCGAGTATCTAAATTAGTTTGTTTTGTTTGTTTAATTTATGCAAGCTGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGATAATTAAGTGAATTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99096 [ CGGCGGCGACCGCGTACGGCTGCTTCGAACGAACTNCTACGAGCCNTGCGCCAACGGGAAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCGAGGCGCCCGACGAGGCTTGATCGCCGACGACGAGCGCCGCCGCGCCGCCGTCCATCGATCTCCATATCCGCCCGTAGCCGCCGGCTATATATACACTCGATTATTTGTTTGTTTGTTGTTAATTCAAGTTTGATTGATTTAACCGTCGNGTATCTAAATTAGTTTGTTTTGTTTGTTTAATTTATGCAAGCTGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTNATAATTAAGTGAATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_15409#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 435 fasta sequence
[CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGNGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTCAGCGGCGCCGGCNGGCCCACGCCATGGCGCGAACCGAGGCTTTGATCGNCGACGACGAGCGCGCGCGCCGCCCGTCCATCGATCTNCATATCCGCCCGTAGCCGCCGNTATTATATACACTCGATTATTTGTTTGTTTGTTGTTAATTCAAGTTTGATTGATTTTACCNTCGAGTATCTAAATTAAGTTTGGTTTTGTTTGTTAATTTATGCAAGCTTGGGTACTTTNTAAGGA]
[+] EMBL AU064180 [CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGNGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTCAGCGGCGCCGGCNGGCCCACGCCATGGCGCGAACCGAGGCTTTGATCGNCGACGACGAGCGCGCGCGCCGCCCGTCCATCGATCTNCATATCCGCCCGTAGCCGCCGNTATTATATACACTCGATTATTTGTTTGTTTGTTGTTAATTCAAGTTTGATTGATTTTACCNTCGAGTATCTAAATTAAGTTTGGTTTTGTTTGTTAATTTATGCAAGCTTGGGTACTTTNTAAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15409#0 CATCGATCTTAATTTCTCTCTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAG 60
consensus_15409#2 -------------------CTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAG 41
consensus_15409#1 ------------TTTCTCTCTTCATCATCTCGCTATATACGTGCAATGCCGGTGGCNCAG 48
***************************** ******* ***
consensus_15409#0 GTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTAC 120
consensus_15409#2 GTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTAC 101
consensus_15409#1 GTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCNCCGTGGTGGTGCCGNCGGCGTAC 108
************************************ *********** ** ********
consensus_15409#0 GTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGG 180
consensus_15409#2 GTGCCGGCGN-GACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGG 160
consensus_15409#1 GTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGG 168
********* *************************************************
consensus_15409#0 AAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGG-GGC 239
consensus_15409#2 AAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTT-CAGCGGCGCCGGCNG-GCC 218
consensus_15409#1 AAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGC 228
**************************************** ************* * * *
consensus_15409#0 CCCGCCGAGGCGCCCGACGAGGCTT-GATCGCCGACGACGAGCGCCGCCGCGCCGCC-GT 297
consensus_15409#2 CACGCCATGGCGCGAACCGAGGCTTTGATCGNCGACGACGAGCGC--GCGCGCCGCCCGT 276
consensus_15409#1 CCCGCCNAGGCGCCCGACGAGGCTT-GATCGCCGACGACGAGCGCCGCCGCGCCGCC-GT 286
* **** ***** ******** ***** ************* ********* **
consensus_15409#0 CCATCGATCTCCATATCCGCCCGTAGCCGCCGGCTATATATACACTCGATTATTTGTTTG 357
consensus_15409#2 CCATCGATCTNCATATCCGCCCGTAGCCGCCGNTATTATATACACTCGATTATTTGTTTG 336
consensus_15409#1 CCATCGATCTCCATATCCGCCCGTAGCCGCCGGCTATATATACNCTCGATTATTTGTTTG 346
********** ********************* ******* ****************
consensus_15409#0 TTTGTTGTTAATTCAAGTTTGATTGATTTAACCGTCGAGTATCTAAATTAGTTT--GTTT 415
consensus_15409#2 TTTGTTGTTAATTCAAGTTTGATTGATTTTACCNTCGAGTATCTAAATTAAGTTTGGTTT 396
consensus_15409#1 TTTGTTGTTAATTCAAGTTTGATTGATTTAACCGTCGAGTATCTAAATTAGTTT--GTTT 404
***************************** *** **************** ** ****
consensus_15409#0 TGTTTGTTTAATTTATGCAAGCTGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGAT 475
consensus_15409#2 TGTTTGTT-AATTTATGCAAGCTTGGGTACTTTNTAAGGA-------------------- 435
consensus_15409#1 TGTTTGTTTAATTTATGCAAGCTGGTGTACTCTCTCAGCGATTTGTAATTCTTGTGTGAT 464
******** ************** * ***** * * **
consensus_15409#0 AATTAAGTGAATTTGTTCCCTTGTTTCTTCTTTGATTAATTAATTACCGAGATGCCTTGC 535
consensus_15409#2 ------------------------------------------------------------
consensus_15409#1 AATTAAGTGAATTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 513
consensus_15409#0 AAAAAAAAAAAA 547
consensus_15409#2 ------------
consensus_15409#1 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||