cluster # 1541

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Oryza sativa
cluster # 1541 cluster # 1541 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1541#0 length = 957 sequences # 2

consensusID : consensus_1541#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 957
fasta sequence

                              [GAGAGAGAGAGCTCCATCTTCCACGGCGACGACGACGGCGGCGGCGGCGGCGAGGGGAGGAGGAGATGAAGCTGAAGCAGCTGGAGGGTCTCCTCGGAGACCTGCAGCAGTTCACCGCACCCAAGGTGGAGCTGGAGCAGTATGCAACGGGCCCTCACATCGCGTCGCGGATGCTCTACACGGCGGAGAATAGTTTTGATGACATAACTGGCAAAGTGGTGGCTGACTTTGGCTGCGGGTGTGGCACCCTGTCTGTGGCAAGCTCTCTGCTGGATGCTGAGCATGTTGTTGGAATTGATATTGACCCGCAATCCCTTGAACTTGCTCAAGAAAATGCTGCAGATCTAGAGCTGGATATCGACTTAATTCAGTGTGATATAAAGAATTTAAATTTGAGAGGCCTTCTTGTTGACACTGTTGTCATGAATCCTCCCTTTGGGACAAGCAGAAAAGGAGCTGACATGGAATTCATTTCTATGGGCATGAAGGTTGCCACTCGAGCTGTCTATTCGCTACACAAGACTTCTACCAGAGAACACATCAAGAAGGTAGCCTTGCGCAACTGCAATGCCATAAGTGCCGAGGTTCTATGTGAGCTCCGCTACAACCTACCACGGACATACAAGTTTCACAAACAAAACGAGGTTGATATCGCCGTCGATTTTTGGCGGTTCGTGCCACGAGCCCGAGACGAAGGTAGCACTGCATGCTCTGTTACCAACCTTAAACAGAGAAGAATGCACAGATGATCCTAAAACATTTTCGTAGCGGTTTTTTAGCGGTTCAGCCGTGTTGTGTCATCTCTCGCGCAGTTGGCCATGTGATGAACTTGGATCTTTTGATTGCGAATTTGTGATTGCAACGAAGGTATATGTGTTCGTACAAGTACAATGCTCTTTTTTTTTTCTTTTGAAAGTGGTCGTTTAACATTTTGATGATGCGTAATAATAGTCCATC]

[+] EMBL AK066755             [GAGAGAGAGAGCTCCATCTTCCACGGCGACGACGACGGCGGCGGCGGCGGCGAGGGGAGGAGGAGATGAAGCTGAAGCAGCTGGAGGGTCTCCTCGGAGACCTGCAGCAGTTCACCGCACCCAAGGTGGAGCTGGAGCAGTATGCAACGGGCCCTCACATCGCGTCGCGGATGCTCTACACGGCGGAGAATAGTTTTGATGACATAACTGGCAAAGTGGTGGCTGACTTTGGCTGCGGGTGTGGCACCCTGTCTGTGGCAAGCTCTCTGCTGGATGCTGAGCATGTTGTTGGAATTGATATTGACCCGCAATCCCTTGAACTTGCTCAAGAAAATGCTGCAGATCTAGAGCTGGATATCGACTTAATTCAGTGTGATATAAAGAATTTAAATTTGAGAGGCCTTCTTGTTGACACTGTTGTCATGAATCCTCCCTTTGGGACAAGCAGAAAAGGAGCTGACATGGAATTCATTTCTATGGGCATGAAGGTTGCCACTCGAGCTGTCTATTCGCTACACAAGACTTCTACCAGAGAACACATCAAGAAGGTAGCCTTGCGCAACTGCAATGCCATAAGTGCCGAGGTTCTATGTGAGCTCCGCTACAACCTACCACGGACATACAAGTTTCACAAACAAAACGAGGTTGATATCGCCGTCGATTTTTGGCGGTTCGTGCCACGAGCCCGAGACGAAGGTAGCACTGCATGCTCTGTTACCAACCTTAAACAGAGAAGAATGCACAGATGATCCTAAAACATTTTCGTAGCGGTTTTTTAGCGGTTCAGCCGTGTTGTGTCATCTCTCGCGCAGTTGGCCATGTGATGAACTTGGATCTTTTGATTGCGAATTTGTGATTGCAACGAAGGTATATGTGTTCGTACAAGTACAATGCTCTTTTTTTTTTCTTTTGAAAGTGGTCGTTTAACATTTTGATGATGCGTAATAATAGTCCATC]
[+] EMBL BE230143             [               ATCTTCCACGGCGACGACGACGGCGGCGGCGGCGGCGAGGGGAGGAGGAGATGAAGCTGAAGCAGCTGGAGGGTCTCCTCGGAGACCTGCAGCAGTTCACCGCACCCAAGGTGGAGCTGGAGCAGTATGCAACGGGCCCTCACATCGCGTCGCGGATGCTCTACACGGCGGAGAATAGTTTTGATGACATAACTGGCAAAGTGGTGGCTGACTTTGGCTGCGGGTGTGGCACCCTGTCTGTGGCAAGCTCTCTGCTGGATGCTGAGCATGTTGTTGGAATTGATATTGACCCGCAATCCCTTGAACTTGCTCAAGAAAATGCTGCAGATCTAGAGCTGGATATCGACTTAATTCAGTG GATATAAAGAATTTAAATTTGAGAGGCCTTCTTGTTCACACTGTTGTCATGAATCCTCCCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_1541#0
GAGAGAGAGAGCTCCATCTTCCACGGCGACGACGACGGCGGCGGCGGCGGCGAGGGGAGG
AGGAGATGAAGCTGAAGCAGCTGGAGGGTCTCCTCGGAGACCTGCAGCAGTTCACCGCAC
CCAAGGTGGAGCTGGAGCAGTATGCAACGGGCCCTCACATCGCGTCGCGGATGCTCTACA
CGGCGGAGAATAGTTTTGATGACATAACTGGCAAAGTGGTGGCTGACTTTGGCTGCGGGT
GTGGCACCCTGTCTGTGGCAAGCTCTCTGCTGGATGCTGAGCATGTTGTTGGAATTGATA
TTGACCCGCAATCCCTTGAACTTGCTCAAGAAAATGCTGCAGATCTAGAGCTGGATATCG
ACTTAATTCAGTGTGATATAAAGAATTTAAATTTGAGAGGCCTTCTTGTTGACACTGTTG
TCATGAATCCTCCCTTTGGGACAAGCAGAAAAGGAGCTGACATGGAATTCATTTCTATGG
GCATGAAGGTTGCCACTCGAGCTGTCTATTCGCTACACAAGACTTCTACCAGAGAACACA
TCAAGAAGGTAGCCTTGCGCAACTGCAATGCCATAAGTGCCGAGGTTCTATGTGAGCTCC
GCTACAACCTACCACGGACATACAAGTTTCACAAACAAAACGAGGTTGATATCGCCGTCG
ATTTTTGGCGGTTCGTGCCACGAGCCCGAGACGAAGGTAGCACTGCATGCTCTGTTACCA
ACCTTAAACAGAGAAGAATGCACAGATGATCCTAAAACATTTTCGTAGCGGTTTTTTAGC
GGTTCAGCCGTGTTGTGTCATCTCTCGCGCAGTTGGCCATGTGATGAACTTGGATCTTTT
GATTGCGAATTTGTGATTGCAACGAAGGTATATGTGTTCGTACAAGTACAATGCTCTTTT
TTTTTTCTTTTGAAAGTGGTCGTTTAACATTTTGATGATGCGTAATAATAGTCCATC

clustalw multiple alignements is not computed in this case