These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15416#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1990 fasta sequence [CTCTCACTCCCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC-CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT-GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT-ATGGGGTTAATTACAAAATCACAGTTTAA-CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT-GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC-GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT-TTACCA-TGTGATATACACA--CTCT-GTCCTCTTGT-GACACGATCAGAGGAACATGGTTTCCCCATAAA-TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA-TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA-CTGAAGTATCGGTGACGCCA-CTCGATTGT-TAGCATGTAATAAAGCTTAGAATTGTTATGGAC-AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAATTGGGCGTTCCCAAAAAAAAAA] [+] EMBL AK120117 [CTCTCACTCCCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGATAATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAA ] [+] EMBL CB660733 [ CCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGGACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCATCAGCTAGCTCGCGCTCGTCTACTAGAACGGGGCGTTCCACATCGCCTACAACAAGTCTCTCGTATGG ] [+] EMBL CA755899 [ CTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCNAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGNGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACNACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CC ] [+] EMBL CB678636 [ GCTCGCCCTCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCTGGGTG TAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGAATGCTGGAC ] [+] EMBL CB665930 [ TCAGCCCCGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGAGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGGCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGCGCCACGGGTACTGGGTTCAGCTACAGCTCCTATCCGCGCGACACCCGTGACGATGAAGCT GGTGTTAGCAACGAC ] [+] EMBL CB663926 [ CTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGGACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCTAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGAGGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCAGTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGC ] [+] EMBL OSCBP31 [ CGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATGCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAATTGGGCGTTCC ] [+] EMBL CB644508 [ CCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCANGCCATGCTGCT ] [+] EMBL OSC104521 [ CACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGANCAGTGAGGGCATTCACATCAATTTGAAGGGNTTTGCTATTGGCAATGGGTTAACGGATCCAGCANTACANTACANGGCATACACTGNTTACTCATTGGAT ATGGGGTTANTTACACAATCACAGTTTAACCAGG ] [-] EMBL CB665931 [ AATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACATTgc ] [-] EMBL CB663927 [ GGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGCGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTC ] [+] EMBL AU173376 [ AGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGAT ] [-] EMBL CB644509 [ AGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCT ] [-] EMBL CB678637 [ GCAGCCCACCTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACACGGTCCCAATGGATCACCCGAAGGTC GCTCTGGAGATGCTGATCAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGGTTGATT TTCCCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACACGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCCCGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCC CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC CGAAGCCAATCTCTTTGTTATGAGGCCTc ] [-] EMBL CB660734 [ AACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTTTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATTTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTTTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCCCATGGTACCAATGGATCAACCGAAGGTC GCTTTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACCCC CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCCCTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCC CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGAGGGTGCTATGGATGGTATAATCTGTGCTCCAAACTATAAAGGAAATAT ] [+] EMBL AU092090 [ ACTCCTTGAGAATGNCATCAAAGTGTTGATTTATGCTGAAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAAaaaaaa ] [+] EMBL AK059488 [ GATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGT ] [+] EMBL BI807210 [ ACGATGGNTGGCCACAGTGNACCAATGGATCAACCGAAGGTCTGCTCTGGAGATGCTGATGAGGT GACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACAAGCTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACCTGAAGTATCGGTGACGCCACCTCGATTGTNTAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCCATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCC AACTATAC GTAAATATTTTTGCGGGAATTGGGCGTTCCCAAAAAAAAAA] [+] EMBL BI797318 [ TCGATTGTTACCAGGGTGATAGACACA CTCTGGTCCTCTTGTGGACACGATCAGAGGAACATGGTTTCCCCATAAATTTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCG CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGACAAGAAGCCAATCTCTTTGTTATGA GGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCTGGAATTGGGCGTTCCCAAAAAAAAAA] [+] EMBL AK058769 [ AGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATA ] [-] EMBL AU165167 [ GGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAAAAAA ] consensusID : consensus_15416#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence [CCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGTGATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACTCGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCNAAAAAAAAAAAAA] [+] EMBL AU173377 [CCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGTGATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACTCGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCNAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15416#0 CTCTCACTCCCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCC 60 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 GTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCG 120 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCG 180 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 TCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCC 240 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 ACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAA 300 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGT 360 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAA 420 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 GGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGA 480 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 TCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGC 540 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGT 600 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CGAATCTGATATATGTTGATCAGCCCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGC 660 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 GCGACACCCGTCACGATGAAGCTGGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCT 720 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 TCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATG 780 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGG 840 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 GCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATAC 900 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 AATACAAGGCATACACTGATTACTCATTGGATATGGGGTTAATTACAAAATCACAGTTTA 960 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 ACAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTG 1020 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 GCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGA 1080 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCT 1140 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 ATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTG 1200 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 TTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATT 1260 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 GGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGA 1320 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 TTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATT 1380 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 CTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTG 1440 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 ATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACG 1500 consensus_15416#1 ------------------------------------------------------------ consensus_15416#0 ATGCTGGCCACATGGTACCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGT 1560 consensus_15416#1 -----------------CCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGT 43 ******************************************* consensus_15416#0 GGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGT 1620 consensus_15416#1 GGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGT 103 ************************************************************ consensus_15416#0 GATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTA 1680 consensus_15416#1 GATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTA 163 ************************************************************ consensus_15416#0 GTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTAC 1740 consensus_15416#1 GTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTAC 223 ************************************************************ consensus_15416#0 CGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACT 1800 consensus_15416#1 CGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACT 283 ************************************************************ consensus_15416#0 CGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTA 1860 consensus_15416#1 CGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTA 343 ************************************************************ consensus_15416#0 TGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGG 1920 consensus_15416#1 TGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGG 403 ************************************************************ consensus_15416#0 ATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAATTGGGCGTTCCC 1980 consensus_15416#1 ATGGTATAATCTGTGCTCCNAAAAAAAAAAAAA--------------------------- 436 ******************* ** * * * ** consensus_15416#0 AAAAAAAAAA 1990 consensus_15416#1 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||