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Oryza sativa
cluster # 15426 cluster # 15426       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15426#0 length = 1184 sequences # 19  
consensus_15426#1 length = 445 sequences # 2  
consensus_15426#2 length = 341 sequences # 1  

consensusID : consensus_15426#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1184
fasta sequence
                              [ACACGCACGTTGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC-GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC-GGCAGCAACCCCGCGT-GGAACACCGTGCTCC-A-CTTCCCCGTCCCCG-CCCGCTTCG-ACACCCGCGGCCTCGCCCT-CCACGTCCAGCTCCGCGCCCGGCGC-TCCTTCGGC-GGCCACCGCGACGTCGGGGACGTGTTCGTGCCCC-TCGACGACC-TCC-TCGCCGGCGC-GCACGACGGCGGCGAGCCGA-GGCCGGCTAGCTACCAGGTGCGCCGCCCCATGTCCGCCCGCGCGCACGGCACGCTCTACTTCTGCTACAGGTTCACCGACGTCAAGCATCCCGCCCTCGAAGCCATCGAGGCCGCGACCGCGACCGCGACGAGCAGCGCCACCAAACAAGGGCAGTACGTGCCCATGTACGCGCAGGACTCTGATGAGAAGGCGACGGAGAAGAGCGTGTCGTCGCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTACGGCGCGCCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGA-CGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGA-GGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGC-TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAATGGGAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATATATATATCATCCAGTACGTACAAAAACACATCTCTACTCCTTAAAAA]

[+] EMBL AK100805             [ACACGCACGTTGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAGCAACCCCGCGT GGAACACCGTGCTCC A CTTCCCCGTCCCCG CCCGCTTCG ACACCCGCGGCCTCGCCCT CCACGTCCAGCTCCGCGCCCGGCGC TCCTTCGGC GGCCACCGCGACGTCGGGGACGTGTTCGTGCCCC TCGACGACC TCC TCGCCGGCGC GCACGACGGCGGCGAGCCGA GGCCGGCTAGCTACCAGGTGCGCCGCCCCATGTCCGCCCGCGCGCACGGCACGCTCTACTTCTGCTACAGGTTCACCGACGTCAAGCATCCCGCCCTCGAAGCCATCGAGGCCGCGACCGCGACCGCGACGAGCAGCGCCACCAAACAAGGGCAGTACGTGCCCATGTACGCGCAGGACTCTGATGAGAAGGCGACGGAGAAGAGCGTGTCGTCGCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTACGGCGCGCCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGA CGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGC TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAATGGGAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATATATATATCA                                      ]
[+] EMBL AU063899             [          TGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAGCAACCCCGCGT GGAACAGCGTGCTCC A CTTCCCCGTCCCCG CCCGNTTCG ACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU163429             [          TGCCACCACAGGCTACGCAAAATTTTNTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCAACCTCAAGAAGGTCACTCTCTTCTNGCGCATGCATGTNTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAGCAACCCCGCGT GGAACACCGTGCTCC A CTTCCCCGTCCCCG NCCGCTTng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU182464             [          TGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGCAGTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAGCAACCCCGCGT GGAACACCGTGCTCC A CTTCCCCGTCCCCG CCCGCTTCG ACACCCGCGGCCTCGCCCT CCACGTCCAGCTCCGCGCCCGGCGC TCCTTCGGC GGCCACCGCGACGTCGGGGACGTGTTCGTGCCCC TNGACGACC TCC TCGCCGGCGC GCACGACGGCGGGGAGCCGA GG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU063767             [          TGCCACCACAGGCTACGCAAAATTTTTTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCNATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCNAGCAACCTCAAGAAGGTCACTNTTTTNTNGCGCATGCATGTTTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGNACCCACGNCGACCGCAACGGC GGCAGAAACCCCGCNT GGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU063884             [          TGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGAACCCACGCCGACCGCAACGGC GGNAGNAACCCCGCGTNGGAAAACGGTGCTCCAA NTTCCCCGGTACCG NCCGCTTTGAANAACCGGGGCCTTGCCCT TCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU063833             [          TGCCACCACAGGCTACGCAAAATTTTNTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCNAGCAACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTNTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAGAAACCCCGCNT GGAACACCGTGCTCC A CTTCCCCGTCCCCG NCCGCTTCG ACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C72882               [           GCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGCGGGCAAGAACCCCGCGT GG ANAACGTGCTCC ANTTTTCCCGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C98722               [             CACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAGCAACCCCGCGT GGAACACCGTGCTCC A CTTCCCCGTCCCCGACCCGCTTCG ACACCCGCGGCCTCGCCCTNCCACGTCCAGCTCCGCGCCCGGCGCTTCCTTCGGCGGGCCAANGCGACGTCGGGGAC TGTTCGTGCCCCTTCGACGACCTTCCTTCGCCGGCGCGGCAAGACGGCGGCGAGCCGAGGGCCGGTTAGCTAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C72528               [         tngngggnACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCCACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGC GTACCGGTTGCTGGAGCTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTCTACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCCGACCGCAACGGC GGCAANAACCCCGCGT GGAACACCGTGCTCC A CTTCCCCGTCCCCG CCCGNTTCG ACAACCGCGGCCTCG CCT NCACGTCCAGCTTCGCGCCCGGCG  TTCTTCGGC GG CACCGCGACGTCGGGGACGTGTTCGTG CCC TCGACGACC TTC Tt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BP184539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACGCTCTACTTCTGCTACAGGTTCACCGACGTCAAGCATCCC CCCTCGAAGCCATCGAGGCCGCGACCGCGACCGCGACGAGCAGCGCCACCAAACAAGGGCAGTACGTGCCCATGTACGCGCAGGACTCTGATGAGAAGGCGACGGAGAAGAGCGTGTCGTCGCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTACGGCGCGCCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGA CGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGC TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAAaaaaaaaa                                                                                                   ]
[+] EMBL C72209               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAAACAAGGGCAGTACGTGCCCATGTACGCGCAGGACTCTGATGAGAAGGCGACGGAGAAGAGCGTGTCGTCGCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTAC GCGCGCCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCGTACGCGTACAACGCCGGCCCACCGCCGCCGG GA CGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGG CTCGGCTTCGGG TTCTCGGCGGCGCGGTCGGCGGGATTATGCTTCGGGGAAATtg                                                                                                                                                                                                                                                             ]
[+] EMBL AU182465             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTACGGCGCGCCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGA CGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATNATGC TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAAAAA                                                                                                           ]
[+] EMBL AU165532             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCAGCAGTACGGTTACGCGGGTCAGCCGCCGTACGCGTACAACGCCGGCCCA CGCCGCCGGCGA CGTACA NTACGCGGCGGCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGGCCTCGGANTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGC TCGGGGAAATGGTCGGCGACATGGCAG TGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAAAAA                                                                                                           ]
[+] EMBL AU164421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTACGCGTACAACGCCGGCCCACCGCCGCCGG GANCGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGANGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGC TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAATGGGAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGTTATATATATATATATATCATCCAGTACGTACAAAA                      ]
[+] EMBL C73248               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTACGCGTACAACGCCGGCCCACNGCCGCCGG NA CGTACAGCTACGCGGCGGCACAACAGCCGGCGG GN GGAAAGGTGGACGANTGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATNATGC TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACNACGCCGGGTTCAACGACGCACTGGAATTTNAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAANTTTTTNACGTGCATAAGAAATTTNACGATCCAACAATGGGAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATATATATA                                         ]
[+] EMBL AU082955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTACGCGTACAACGCCGGCCCACCGCCGCCGGCGA CGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGC TCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAATGGGAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATATATATATCATCCAGTACGTACAAAAA                     ]
[+] EMBL C98615               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCACAACAGCCGGCGGCGA GGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGNTCCTCGGCGGCGCNGTCGGCGGGATGATGC TCGGGGAAATGGTCGGCGACATGGAG  TGACGCCGCCTACGACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTNCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAAAAA                                                                                                           ]
[+] EMBL AU165503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GACGCNGCCTACGACGCCGGGTTCAACGACGNACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAATGGGAAACGCGATGTCAGGCTACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATATATATATCATCCAGTACGTACAACCACACATCTCTACTCCTTAAAAA]


>consensus_15426#0 ACACGCACGTTGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCC ACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGCGTACCGGTTGCTGGAG CTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTC TACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCC GACCGCAACGGCGGCAGCAACCCCGCGTGGAACACCGTGCTCCACTTCCCCGTCCCCGCC CGCTTCGACACCCGCGGCCTCGCCCTCCACGTCCAGCTCCGCGCCCGGCGCTCCTTCGGC GGCCACCGCGACGTCGGGGACGTGTTCGTGCCCCTCGACGACCTCCTCGCCGGCGCGCAC GACGGCGGCGAGCCGAGGCCGGCTAGCTACCAGGTGCGCCGCCCCATGTCCGCCCGCGCG CACGGCACGCTCTACTTCTGCTACAGGTTCACCGACGTCAAGCATCCCGCCCTCGAAGCC ATCGAGGCCGCGACCGCGACCGCGACGAGCAGCGCCACCAAACAAGGGCAGTACGTGCCC ATGTACGCGCAGGACTCTGATGAGAAGGCGACGGAGAAGAGCGTGTCGTCGCCGGTCACC GCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTACGGCGCG CCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCG TACGCGTACAACGCCGGCCCACCGCCGCCGGCGACGTACAGCTACGCGGCGGCACAACAG CCGGCGGCGAGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGC GCGGTCGGCGGGATGATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTAC GACGCCGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACA TGGGCAATGCACCTGTATAAATTTGTCACGTGCATAAGAAATTTCACGATCCAACAATGG GAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATATAT ATATCATCCAGTACGTACAAAAACACATCTCTACTCCTTAAAAA



consensusID : consensus_15426#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 445
fasta sequence
                              [GCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCNCCGGTCGTGCCGTACGGCGCGCCGTACGGAGGAGGGTACCCNCCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCNCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGACGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGAGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATNATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCTGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACNGTGCATAAGAAATTTCNCGATCCNAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU182240             [GCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCNCCGGTCGTGCCGTACGGCGCGCCGTACGGAGGAGGGTACCCNCCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCNCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGACGTACAGCTACGCGGCGGCACAACAGCCGGCGGCGAGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATNATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCCTGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACNGTGCATAAGAAATTTCNCGATCCNAAAAAAAAAAAAAAAAA   ]
[+] EMBL AU165651             [                                                                                                                                                                                                                                                                         ATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTACGACGCC GGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCAC GTGCATAAGAAATTTCACGATCCAAAAAAAAAAAAAAAAAAAAA]


>consensus_15426#1 GCCGGTCACCGCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCNCCGGTCGTGCC GTACGGCGCGCCGTACGGAGGAGGGTACCCNCCGCATCAGCAGCAGTACGGTTACGCGGG TCAGCCNCCGTACGCGTACAACGCCGGCCCACCGCCGCCGGCGACGTACAGCTACGCGGC GGCACAACAGCCGGCGGCGAGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCT CCTCGGCGGCGCGGTCGGCGGGATNATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGA CGCCGCCTACGACGCCTGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTT TCCTGTGTACATGGGCAATGCACCTGTATAAATTTGTCACNGTGCATAAGAAATTTCNCG ATCCNAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_15426#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 341
fasta sequence
                              [GCGGCNAGGAAAGGTGGACGAATNGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGCTCGGGGAAATGGTCGGCGACATGGGAGNTGACGCCGCCTACGACGCCGGNTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACNTGGGCAATGCNCCTGTNTAAATTTGTCNCGTGCATAAGAAATTTCNCGATCCAACAATGGGAAACGCGATGTCAGGCCNCAAGGGTAAGCAGATCCTAAATCAACGCTNTATATATATATATATCATCCNGTTCGTNCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C98723               [GCGGCNAGGAAAGGTGGACGAATNGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCGGTCGGCGGGATGATGCTCGGGGAAATGGTCGGCGACATGGGAGNTGACGCCGCCTACGACGCCGGNTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACNTGGGCAATGCNCCTGTNTAAATTTGTCNCGTGCATAAGAAATTTCNCGATCCAACAATGGGAAACGCGATGTCAGGCCNCAAGGGTAAGCAGATCCTAAATCAACGCTNTATATATATATATATCATCCNGTTCGTNCAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15426#2 GCGGCNAGGAAAGGTGGACGAATNGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGCGCG GTCGGCGGGATGATGCTCGGGGAAATGGTCGGCGACATGGGAGNTGACGCCGCCTACGAC GCCGGNTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTACNTGG GCAATGCNCCTGTNTAAATTTGTCNCGTGCATAAGAAATTTCNCGATCCAACAATGGGAA ACGCGATGTCAGGCCNCAAGGGTAAGCAGATCCTAAATCAACGCTNTATATATATATATA TCATCCNGTTCGTNCAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15426#0      ACACGCACGTTGCCACCACAGGCTACGCAAAATTCTCTCCCTTCCTCCTCCACCACCTCC 60
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      ACTCCGACGATCCTCCTCCTGATCCTGTGCCGGCCGGCGATGGCGTACCGGTTGCTGGAG 120
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      CTCACGCTGGTCTCCGCGAGCGACCTCAAGAAGGTCACTCTCTTCTCGCGCATGCATGTC 180
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      TACGCCGTCGCCTCCATCTCCGGGAGCAACGTCCCCATGCCCATGCACGGCACCCACGCC 240
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      GACCGCAACGGCGGCAGCAACCCCGCGTGGAACACCGTGCTCCACTTCCCCGTCCCCGCC 300
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      CGCTTCGACACCCGCGGCCTCGCCCTCCACGTCCAGCTCCGCGCCCGGCGCTCCTTCGGC 360
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      GGCCACCGCGACGTCGGGGACGTGTTCGTGCCCCTCGACGACCTCCTCGCCGGCGCGCAC 420
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      GACGGCGGCGAGCCGAGGCCGGCTAGCTACCAGGTGCGCCGCCCCATGTCCGCCCGCGCG 480
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      CACGGCACGCTCTACTTCTGCTACAGGTTCACCGACGTCAAGCATCCCGCCCTCGAAGCC 540
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      ATCGAGGCCGCGACCGCGACCGCGACGAGCAGCGCCACCAAACAAGGGCAGTACGTGCCC 600
consensus_15426#1      ------------------------------------------------------------
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      ATGTACGCGCAGGACTCTGATGAGAAGGCGACGGAGAAGAGCGTGTCGTCGCCGGTCACC 660
consensus_15426#1      --------------------------------------------------GCCGGTCACC 10
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      GCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCGCCGGTCGTGCCGTACGGCGCG 720
consensus_15426#1      GCCTACCCGCCGCCGTCGAACGCCGTGGTAGCGCACCCNCCGGTCGTGCCGTACGGCGCG 70
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      CCGTACGGAGGAGGGTACCCACCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCGCCG 780
consensus_15426#1      CCGTACGGAGGAGGGTACCCNCCGCATCAGCAGCAGTACGGTTACGCGGGTCAGCCNCCG 130
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      TACGCGTACAACGCCGGCCCACCGCCGCCGGCGACGTACAGCTACGCGGCGGCACAACAG 840
consensus_15426#1      TACGCGTACAACGCCGGCCCACCGCCGCCGGCGACGTACAGCTACGCGGCGGCACAACAG 190
consensus_15426#2      ------------------------------------------------------------
                                                                                   

consensus_15426#0      CCGGCGGCGAGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGC 900
consensus_15426#1      CCGGCGGCGAGGAAAGGTGGACGAATGGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGC 250
consensus_15426#2      ---GCGGCNAGGAAAGGTGGACGAATNGGCATGGGCCTCGGACTCGGGCTCCTCGGCGGC 57
                          ***** ***************** *********************************

consensus_15426#0      GCGGTCGGCGGGATGATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTAC 960
consensus_15426#1      GCGGTCGGCGGGATNATGCTCGGGGAAATGGTCGGCGACATGGAGGCTGACGCCGCCTAC 310
consensus_15426#2      GCGGTCGGCGGGATGATGCTCGGGGAAATGGTCGGCGACATGGGAGNTGACGCCGCCTAC 117
                       ************** ****************************  * *************

consensus_15426#0      GACGCC-GGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTAC 1019
consensus_15426#1      GACGCCTGGGTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTAC 370
consensus_15426#2      GACGCC-GGNTTCAACGACGCACTGGAATTTTAGGTCTTTTGTCGTGTTTTCCTGTGTAC 176
                       ****** ** **************************************************

consensus_15426#0      ATGGGCAATGCACCTGTATAAATTTGTCACG-TGCATAAGAAATTTCACGATCCAACAAT 1078
consensus_15426#1      ATGGGCAATGCACCTGTATAAATTTGTCACNGTGCATAAGAAATTTCNCGATCCNAAAAA 430
consensus_15426#2      NTGGGCAATGCNCCTGTNTAAATTTGTCNCG-TGCATAAGAAATTTCNCGATCCAACAAT 235
                        ********** ***** ********** *  *************** ****** * ** 

consensus_15426#0      GGGAAACGCGATGTCAGGCCACAAGGGTAAGCAGATCCTAAATCAACGCTATATATATAT 1138
consensus_15426#1      AAAAAAAAAAAAAAA--------------------------------------------- 445
consensus_15426#2      GGGAAACGCGATGTCAGGCCNCAAGGGTAAGCAGATCCTAAATCAACGCTNTATATATAT 295
                          ***    *                                                 

consensus_15426#0      ATATATCATCCAGTACGTACAAAAACACATCTCTACTCCTTAAAAA 1184
consensus_15426#1      ----------------------------------------------
consensus_15426#2      ATATATCATCCNGTTCGTNCAAAAAAAAAAAAAAAAAAAAAAAAAA 341
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)