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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1993 fasta sequence
[CCTTTCTCCCACGCCCAAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA-GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT-GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT-CCTGG-ACTT-GGATGGATGTTAACAAAG-CCTA-CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC-TTATTGGGATGACT-GGGTGAGGCT-AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG-CAGAACATACAATTTTGGCGAACATGGGTC-AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA-CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT-GAGCTA-CCTCAAGGAGGACAAGTTCCT-GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG-CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACATAACATCGTGTTCTGTGTTTTGTTTGCCATTGAAAACTGCCTGTAATGTAGTTTTTGAACTGGACATATGCTAGAATGAAGGGAAATGAGATACTAATTGATATTGA]
[+] EMBL AK101526 [CCTTTCTCCCACGCCCAAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAG ]
[+] EMBL CB638695 [ AAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAAGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACG ]
[+] EMBL CF304454 [ AGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTT ]
[+] EMBL CB640796 [ CCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCTTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTC ]
[+] EMBL CB663078 [ CCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATANAT ]
[+] EMBL CB633409 [ TCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCCTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCCTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATACATGGAGAAGTGAAG AAAAAGCTTTGAGTTATAATGAAATAACATA ]
[+] EMBL CB638693 [ TCCGACGCCATCCATCTATTCGCGCCGCACCGACCGCTCAACTCTTTCTTCGCGCAAGCGGAGGCGGTGGCGCAAGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTGCTCCGGACCGCACAAGAATAAGAAGAACAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTACTCCTCCTGCCCTTTCTCCCCAACATCCCATCCCACATCAAAGGC ]
[+] EMBL CF323456 [ TGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAAGGGCCAGGAGAG TGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAA ]
[+] EMBL OSA457976 [ AGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCT ]
[+] EMBL CB631083 [ GCATCCTCCTCCTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCCTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTTATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGATGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCTGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTAT ]
[+] EMBL CB677281 [ AAGCCTTAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCG ]
[+] EMBL CF324472 [ ggAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCATGGGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATT ]
[+] EMBL AK058826 [ GGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATGTGTGATTCATCACGTG ]
[-] EMBL CB633410 [ ATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGGGGTATATGTGATTCATCACGTGAGATTCATACAaaaaaaaga ]
[+] EMBL C96708 [ CGGATTTCTTTCCCTGGNCCTTGGGATGGATGTTAACAAAGCCCTACCATGGATTGAGCTGTCACCTAAGTGGCCCAAAGCTTTTTTGGGATGACTGGGGTGAGGCTAAAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTGCCAGAACATACAATTTTGGCGAACATGGGTCAAAGCATGGGGCAATTCTTCAGACAGTACTTGGAACCCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCTGGAGCTACCCTCAAGGAGGACAAGTTCCTNAATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATGCCCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACAAAAaa ]
[-] EMBL CB631084 [ T GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTTTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACATTACATCGTGTTCTGTGTTTTGTTTGCCATTGAAAACTGCCTGTAATGTAGTTTTTGAACTGGACATATGCTAGAATGAAGGGAAATGAGATACTAATTGATATTGA]
[-] EMBL CB638696 [ CACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACTT GAGCTA CCTCAAGGAGGACAAGTTCTT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCAC ]
[-] EMBL CB669650 [ GGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACATCACATCGTGTTCTGTGTTTTGTTTGCCATTGAAAACTGCCTGTAATGTAGTTTTTGAACTGGACAAAGGGTAGAATGAAGGGAAATGAG ]
[-] EMBL CB638694 [ GTCGCTAGTGCCACCCCTCTCCATGGATGTGATG CAGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGTTTATAAAGGAGTAGTAGTCTTCCGGGACAAGAGTAGTCGAAGAAGAATATACTTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTATCATTGTTTCAGATACAAGCGGCAGCACCTCACTTGACCACTGAGCAGAGATGACCTGCCTGACATTT ]
[-] EMBL CB663079 [ TGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAGCGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCATCAGTCAGCTTAGGGTATAGTGTTGTTGAGG ]
[+] EMBL CF330218 [ TGGATGCGGATGTAAGGATCCAGTATAACTATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACTTGCCTGACATTTTGCTGTATATGTGATTCATC ]
consensusID : consensus_15447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 190 fasta sequence
[NCGCGAGANNNCAGCNNACTTGTTGGGNGAANTTGGGTCCTGGGNCCCCCCNTCGAAGGTCGACCCACNGCGTCCTCCCACGNGTCCGNCCACGCGTCCGAGGCGACGTCGNCCGTNTNTCCGCGTCGGCTNCGGAGCCGACCCACTCCCCTNCTCCGCCGCCATCCATCTATTCGNGCCGCACCGCCCG]
[+] EMBL OSC106011 [NCGCGAGANNNCAGCNNACTTGTTGGGNGAANTTGGGTCCTGGGNCCCCCCNTCGAAGGTCGACCCACNGCGTCCTCCCACGNGTCCGNCCACGCGTCCGAGGCGACGTCGNCCGTNTNTCCGCGTCGGCTNCGGAGCCGACCCACTCCCCTNCTCCGCCGCCATCCATCTATTCGNGCCGCACCGCCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15447#0 CCTTTCTCCCACGCCCAAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCG 60
consensus_15447#1 -------------NCGCGAGANNNCAGCNNACTTGTTGG---GNGAANTTGGGTCCTGGG 44
* * ** * ***** * ** *** *
consensus_15447#0 TCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTC 120
consensus_15447#1 NCCCCCCN-------TCGAAGGTCGACCCACNGCGTCCTCCCACGN--GTCCGNCCACGC 95
* * ** ** * ******** * * ** * *** * * *
consensus_15447#0 GCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCG 180
consensus_15447#1 GT-CCGAGGCGAC--GTCGNCCGTNTNTCCGCGTCGGCTNCGGAGCCGACCCACTCC-CC 151
* *** ** * ** * * * **** *** *** * * * ** * *
consensus_15447#0 TCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAG 240
consensus_15447#1 TNCTCCGCCGCC--ATCCA--TCTATTCGNGCCGCACCGCCCG----------------- 190
* *** ** ** ***** ** * * *** ***** *
consensus_15447#0 AAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCA 300
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 CTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAA 360
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 GGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCG 420
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 CATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTAC 480
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAG 540
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGA 600
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 AGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCT 660
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 CGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGT 720
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTA 780
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGA 840
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 AGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGA 900
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 ACCTGTGCGCACTGAAAGGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTA 960
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 CAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGA 1020
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 AGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACT 1080
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TGATAACGATAAGACAATCATGGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATT 1140
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTTCCTGGACTTGGATGGATGTT 1200
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 AACAAAGCCTACATGGATTGAGCTGTCACCTAAGTGGCCCAAAGCTTATTGGGATGACTG 1260
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 GGTGAGGCTAAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTGCAGAAC 1320
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 ATACAATTTTGGCGAACATGGGTCAAGCATGGGGCAATTCTTCAGACAGTACTTGGAACC 1380
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 AATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCTGAGCTACCTCAAGGA 1440
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 GGACAAGTTCCTGATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATC 1500
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TGATGCCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCA 1560
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 GGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCAT 1620
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAAT 1680
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 ATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGA 1740
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 GATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGC 1800
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGA 1860
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 CTTCCATTGCACCGAAAGCTTAAACATAACATCGTGTTCTGTGTTTTGTTTGCCATTGAA 1920
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 AACTGCCTGTAATGTAGTTTTTGAACTGGACATATGCTAGAATGAAGGGAAATGAGATAC 1980
consensus_15447#1 ------------------------------------------------------------
consensus_15447#0 TAATTGATATTGA 1993
consensus_15447#1 -------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||