These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1208 fasta sequence [CCCCCACGCACTCACGCGCACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTAC-AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA-GGTCAACTTATATGCT-GGACAAGGACAA-TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT-GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG-ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG-CAACATGTTATGGGCTTTGTGC-ACGTTTAGTACATCGTCGGATA-CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC-AAATT-GCTCATGTGAAAAATGTA-CCTACCAGAGACC-GTGATGAAATCTAGAGACTAGTTTTTAACTACCTAGCTTTTATCATACGATCAGTTGTCGCAGGCCCCAATAGATAGACCAAGATAGTTCCCCTAAAAAAAAAAAAAAAAA] [+] EMBL AK102617 [CCCCCACGCACTCACGCGCACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTAC AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTA ] [+] EMBL AK061053 [ CCCCACGCACTCACGCGCACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTAC AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAG ] [+] EMBL OSC792 [ ACTCACGNGCACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCNTGGTGCTGAGCTGGGTGCGGAGGNAGCCGTCCAAGGTCAAGGCGTTCCTCGNCGTGGTCGCC ] [+] EMBL CB647359 [ ACGCGCACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTAC AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTANCTGCGCAC ] [+] EMBL BP184384 [ ACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCG CCACGCGCTCGGCCTCGGAGTCCTCATCTACAAAGCTCACCAAG ] [+] EMBL BP184984 [ acgagGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTAC AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGC ] [+] EMBL AK060043 [ CACAACGCGCTCGCCTCGCCTCGCCCCGATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAGAGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGCTGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGATGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTAC AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTA ] [+] EMBL C28868 [ ATCCGATTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCCGCCCACGCGCTCGGCCTNGGAGTCCTCATCTAC AAGCTCACCAAGGAGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGAGGGTCAACTTATATGCTGGGACAAGGACAATTTTTGCATTGTACTACGTGGTGTTACCTTGTGCTTGGCTAG TCTCCTGGGTTAATCCTT AACATGGGAT ACAT ATC ACAGGA ] [-] EMBL CB647360 [ CAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC ] [+] EMBL BP184385 [ TTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGA GGTCAACTTATATGCT GGACAAGGACAA TTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTAGTTTTTAACTACTTAGCTTTTAaaaaaaaa ] [-] EMBL CA762647 [ TTATTTGCT GGACAAGGACAA TTCTGCATTGTACTACGGGGTGTT CCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCACCATCGCATACCATCATCACCAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTTTTAGCTGCGCACACTGGGTCCTTCAGGTTCTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTAGTTTTTAACTACCTAGCTTTTATCATACGATCAGTTGTCGCAGGCCCCAATAGATAGACCAAGATAGTTCCCCTAAAAAAAAAAAAAAAAA] [-] EMBL CA762648 [ TTATTTGCT GGACAAGGACAA TTCTGCATTGTACTACGGGGTGTT CCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCACCATCGCATACCATCATCACCAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTTTTAGCTGCGCACACTGGGTCCTTCAGGTTCTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTAGTTTTTAACTACCTAGCTTTTATCATACGATCAGTTGTCGCAGGCCCCAATAGATAGACCAAGATAGTTCCCCTAAAAAAAAAAAAAAAAA] [-] EMBL CA762649 [ TTATTTGCT GGACAAGGACAA TTCTGCATTGTACTACGGGGTGTT CCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCACCATCGCATACCATCATCACCAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTTTTAGCTGCGCACACTGGGTCCTTCAGGTTCTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTAGTTTTTAACTACCTAGCTTTTATCATACGATCAGTTGTCGCAGGCCCCAATAGATAGACCAAGATAGTTCCCCTAAAAAAAAAAAAAAAAA] [-] EMBL CA762657 [ TTATTTGCT GGACAAGGACAA TTCTGCATTGTACTACGGGGTGTT CCTTGTGCTGGCCTAGCTCTCCT GGTTCATCCTTCACCATCGCATACCATCATCACCAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTTTTAGCTGCGCACACTGGGTCCTTCAGGTTCTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATT GCTCATGTGAAAAATGTA CCTACCAGAGACC GTGATGAAATCTAGAGACTAGTTTTTAACTACCTAGCTTTTATCATACGATCAGTTGTCGCAGGCCCCAATAGATAGACCAAGATAGTTCCCCTAAAAAAAAAAAAAAAAA] [+] EMBL CA999949 [ GCTGTTTCAGTGCTGCCACAGTTGCGTTTGAT CCTTACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGGGGGCGGTTGTTGACTGCTCTGGGCTATGGTCTCGGGCCTTCGATGGTGCTTCTCTCTGAAATCATTCAAACGTTCATCCAAGCTGATTTCTGCTACTAGTATGCGAAGAGTG ] [+] EMBL CA999720 [ CTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAG ATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTG ] [+] EMBL AU172343 [ ACACAAAGAATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTTCCGTCTGGAGTGGTGTAAAAATGCAGCAGGATG CAACATGTTATGGGCTTTGTGC ACGTTTAGTACATCGTCGGATA CCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTACAAAATT GCTCATGTGAAAAATGTA CCTACCAGAGACCAGTGATGAAATCTAGAGACTAGTTTTTAACTAaaaaaaa ] [-] EMBL AU225750 [ ccgctAAATGCAGCAGGATGCCAACATGTTATGGGCTTTGTGCAACGTTTAGTACATCGTCGGATACCCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTAC AAATTGGCTCATGTGAAAAATGTACCCTACCAGAGACC GTGATGAAATCTAGAGACTAGTTTagcggc ] consensusID : consensus_15458#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 805 fasta sequence [CAGAGGACGAGACAAGGGGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGAGGTCAACTTATATGCTGGACAAGGACAATTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCTGGTTCATCCTTCAACATCGCATAACATCAT-CAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAGATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGT-GCTTTTG-GAG-GG-AAC-TTGTCCTTCGAC-TTCCGTCTGGAGTGGTGT-AAAAATGCAGCAGGATGCAACATGCTATGGGCTTTGCGCACGTTT-AGTACATCGTCGGATA-CCAGA-GCCTTG-TTTGCTTGATAA-TTTTTTTCAGGT-AC-AAATTGG-TCATGC-GAA-AAA-GTACCTACCA-AAACCGCGAGGAAATCTAAAGACTAGTTTTTAACTAAAAAAAAAAAAAAAAAA] [+] EMBL CA766875 [CAGAGGACGAGACAAGGGGAAGACCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGAGGTCAACTTATATGCTGGACAAGGACAATTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCTGGTTCATCCTTCAACATCGCATAACATCAT CAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAGATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGT GCTTTTG GAG GG AACTTTGTCCTTCGAC TTCCGTCTGGAGTGGTGT AAAAATGCAGCAGGATGCAACATGCTATGGGCTTTGCGCACGTTT AGTACATCGTCGGATA CCAGA GCCTTG TTTGCTTGATAA TTTTCTT AGGT AC AAATTGG TCATGC GAA AAA GTACCTACCA AAACCGCGAGGAAATCTAAAGA ] [+] EMBL CB096533 [ CGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAGCAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGAGGTCAACTTATATGCTGGACAAGGACAATTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCTGGTTCATCCTTCAACATCGCATAACATCAT CAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAGATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTAGCTGCGCACACTGGGTCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGNGCTATGGTCTGTGGCCTTCGATGGTGCTTCTCTCNGAAATCGNTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGTGGCTTTTGNCCGNGC AAC TTGTCCTTCGACNTCCCGTCTGGAGTGGCGTCAAAAANGCAGCANGATGCAACATGNTATGGGCTTTGCGCACGTTTAANTNCATCGTCGCATACCCAGANCCCTTGNTTTGCTTGANAACTTTTTTTCAGNTAACAAAATTGGNTCATGCGGAANAAA GTACC ] [+] EMBL AU094464 [ TGGACAAGGACAATTTTGCATTGTACTACGTGGTGTTNCCTTGTGCTGGCCTAGCTCTCCTGGTTCATCCTTCAACATCGCATAACATCATCCAACAGGATCTCCTGGGCTTTCTGTGTTTATTTGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAGATTGTGGAACCATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCTTA NTGCGCACACTGGGNCCTTCAGGTTTTGGATACCCGTGGTCGCTTGTTGACTGCTCTGGGCTATGGTCTCTGGCCTTCGATGGTGCTTCTCTCTGAAATCGTTCAGACGTTCATCCTTGCTGATTTCTGCTACTACTATGTGAAGAGT GTTTTTG GTG GGCAAC TTGTCCTTCGAC TTCCGTCTGGAGTGGTGT AAAAATGCAGCAGGATGCAACATGTTATGGGCTTTGTGCACGTTT AGTACATCGTCGGATA CCAGA GCCTTG TTTGCTTGATAA TTTTTTTCAGTT AC AAATTGC TCATGT GAA AAATGTACCTACCAGAGACCGTGATGAAATCTAGAGACTAGTTTTTAACTAAAAAAAAAAAAAAAAAA] consensusID : consensus_15458#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence [GGCAGAAAAAAACCCTCCCCGTGTTCTCCGATCGGCGGCGAGGCGAGGCGAGGGCGGCGGAGATGAGGGGGGCGAAGCGGCCGCTCGGCGCGGTGATGGCGTGGGTGCGGCGGCAGCCGCCCAAGGTGAAGGCCTTCCTGGCCGTCGTCACCGGCATGGCCGCGCTCGTCTTCATCCGGTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCGGAGGCCGCGCACGCGCTCGGCATCGCCGTGCTCATCTACAAGCTCACCAAGGAGAAGACCTGCGCCGGTTCGCCCCCCCCTCTCGGCTCACGTGTACGGTGTTGCCAGTTCCGTCGCGCGCGCGTGCGCGCGCGCGTCGATCCGTCGAGATCGCCG] [+] EMBL CB639876 [GGCAGAAAAAAACCCTCCCCGTGTTCTCCGATCGGCGGCGAGGCGAGGCGAGGGCGGCGGAGATGAGGGGGGCGAAGCGGCCGCTCGGCGCGGTGATGGCGTGGGTGCGGCGGCAGCCGCCCAAGGTGAAGGCCTTCCTGGCCGTCGTCACCGGCATGGCCGCGCTCGTCTTCATCCGGTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCGCGGAGGCCGCGCACGCGCTCGGCATCGCCGTGCTCATCTACAAGCTCACCAAGGAGAAGACCTGCGCCGGTTCGCCCCCCCCTCTCGGCTCACGTGTACGGTGTTGCCAGTTCCGTCGCGCGCGCGTGCGCGCGCGCGTCGATCCGTCGAGATCGCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15458#0 CCCCCACGCACTCACGCGCACTGCACGCCGCAACACAACGCGCTCGCCTCGCCTCGCCCC 60 consensus_15458#1 ------------------------------------------------------------ consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 GATCGGTGGTGGTGCTCGCCGTCGCCGGGCGGCGCTAGGGTGGCCGGAGAGGCTCCGGAG 120 consensus_15458#1 ------------------------------------------------------------ consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 AGTAGGAGGAGGAGGAGGAGCCGGAGATGAGGGGGTCGAGGAGGCCGGTGGCCGTGGTGC 180 consensus_15458#1 ------------------------------------------------------------ consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 TGAGCTGGGTGCGGAGGCAGCCGCCCAAGGTCAAGGCGTTCCTCGCCGTGGTCGCCGGGA 240 consensus_15458#1 ------------------------------------------------------------ consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 TGGCCGCGCTCGTCTTCATCCGCTTCATCGTCCACGACCACGACAACCTCTTCGTCGCCG 300 consensus_15458#1 ------------------------------------------------------------ consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 CCGAGGCCGCCCACGCGCTCGGCCTCGGAGTCCTCATCTACAAGCTCACCAAGGAGAAGA 360 consensus_15458#1 -------------------------------------CAGAGGACGAGACAAGGGGAAGA 23 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 CCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGC 420 consensus_15458#1 CCTGCGCCGGACTCTCACTCAAGTCTCAGGATTTAACAGCACTATTTCTGGCTGTTAGGC 83 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 TGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAG 480 consensus_15458#1 TGTACTGCAGTTTTGTTATGGAGTATGACATCCATACCATACTTGATACAGCTACACTAG 143 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 CAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGAGGTCAACTTATATGCTGG 540 consensus_15458#1 CAGCTACTCTCTTTGTCATCTACATGATTCGGTTCAAACTGAGGTCAACTTATATGCTGG 203 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 ACAAGGACAATTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCTGG 600 consensus_15458#1 ACAAGGACAATTTTGCATTGTACTACGTGGTGTTACCTTGTGCTGGCCTAGCTCTCCTGG 263 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 TTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATT 660 consensus_15458#1 TTCATCCTTCAACATCGCATAACATCATCAACAGGATCTCCTGGGCTTTCTGTGTTTATT 323 consensus_15458#2 ------------------------------------------------------GGCAGA 6 * consensus_15458#0 TGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAGATTGTGGAAC 720 consensus_15458#1 TGGAAGCTGTTTCAGTGCTGCCACAGTTGCGTTTGATGCAAAACACAAAGATTGTGGAAC 383 consensus_15458#2 AAAAAACCCTCCCCGTGTT-CTCCGATCGGCGGCGAGGCGAGGCG--AGGGCGGCGGAGA 63 ** * * * *** * * * * * ** ** * * * * * *** consensus_15458#0 CATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCT----TAGCTGCGCA 776 consensus_15458#1 CATTTACAGCTCATTATGTGTTTGCATTGGGTGTTGCAAGGTTTCT----TAGCTGCGCA 439 consensus_15458#2 TGAGGGGGGCGAAGCGGCCGCTCGGCGCGGTGATGGCGTGGGTGCGGCGGCAGCCGCCCA 123 ** * * * * ** * ** ** * * *** ** ** consensus_15458#0 CACTG--GGTCCTTCAGGTTTTGGATACC--CGTGGTCGCTTGTTGACTGCTCTGGGCTA 832 consensus_15458#1 CACTG--GGTCCTTCAGGTTTTGGATACC--CGTGGTCGCTTGTTGACTGCTCTGGGCTA 495 consensus_15458#2 AGGTGAAGGCCTTCCTGGCCGTCGTCACCGGCATGGCCGCGCTCGTCTTCATCCGGTTCA 183 ** ** * * * ** * * *** * *** *** * ** ** * consensus_15458#0 TGGTCTCTGGCCTTCGATGGTGCTTC----TCTCTGAAATCGTTCAGACGTTCATCCTTG 888 consensus_15458#1 TGGTCTGTGGCCTTCGATGGTGCTTC----TCTCTGAAATCGTTCAGACGTTCATCCTTG 551 consensus_15458#2 TCGTCCACGACCACGACAACCTCTTCGTCGCCGCGGAGGCCGCGCACGCGCTCGGCATCG 243 * *** * ** **** * * ** ** ** ** ** * * * consensus_15458#0 CTGATTTCTGCTACTA-CTATGTGAAGAGTGTTTTTGGTGGGCAACTTGTCCTTCGACTT 947 consensus_15458#1 CTGATTTCTGCTACTA-CTATGTGAAGAGTGCTTTTGGAGGG-AACTTGTCCTTCGACTT 609 consensus_15458#2 CCGTGCTCATCTACAAGCTCACCAAGGAGAAGACCTGCGCCG--GTTCGCCCCCCC-CTC 300 * * ** **** * ** * *** ** * * * ** * ** consensus_15458#0 CCGTCTGGAGTGGTGTAAAAATGCAGCAGGATGCAACATGTTATGGGCTTTGTGCACGTT 1007 consensus_15458#1 CCGTCTGGAGTGGTGTAAAAATGCAGCAGGATGCAACATGCTATGGGCTTTGCGCACGTT 669 consensus_15458#2 TCGGCTCACGTGT----ACGGTGTTGCCAGTTCCGTCGCGCGCGCGTGCGCGCGCGCGTC 356 ** ** *** * ** ** * * * * * * * ** *** consensus_15458#0 TAGTACATCGTCGGATACCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGTTACAAATTG 1067 consensus_15458#1 TAGTACATCGTCGGATACCAGAGCCTTGTTTGCTTGATAATTTTTTTCAGGTACAAATTG 729 consensus_15458#2 GA-TCCGTCG--AGATCGCCG--------------------------------------- 374 * * * *** *** * * consensus_15458#0 CTCATGTGAAAAATGTACCTACCAGAGACCGTGATGAAATCTAGAGACTAGTTTTTAACT 1127 consensus_15458#1 GTCATGCGAAAAA-GTACCTACCA-AAACCGCGAGGAAATCTAAAGACTAGTTTTTAACT 787 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 ACCTAGCTTTTATCATACGATCAGTTGTCGCAGGCCCCAATAGATAGACCAAGATAGTTC 1187 consensus_15458#1 AAAAAAAAAAAAAAAAAA------------------------------------------ 805 consensus_15458#2 ------------------------------------------------------------ consensus_15458#0 CCCTAAAAAAAAAAAAAAAAA 1208 consensus_15458#1 --------------------- consensus_15458#2 --------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||