These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15464#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1259 fasta sequence [CCTCCAAAAAAAAAC-GCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA-TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC-AGAGTC-TT-GGTGT-GGCATTTTACCGGGGAGCTGACT-GCTGTGTTCTT-GTATATGATGTCAAT-GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT-GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC-TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT-ATCTATGTCCA-ATGCTACATATTGT-TTTTTTA-GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA-CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC-GTG-CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAATACTTCCATTATGTCTTTGAAAAAAAAAAAAAAAACAC] [+] EMBL OSS14644A [CCTCCAAAAAAAAAC GCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGANCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTCAAGAGTC TT GGTGTNGGATTTTTACCGGGGAGCTGACT GCTGTGTTC ] [+] EMBL AU174070 [CCTCCAAAAAAAAACAGCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCA ] [+] EMBL AK070320 [ AGCAAAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAATACAATCCT ] [+] EMBL AK059958 [ CGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAATACAATCCTTC ] [+] EMBL C74808 [ CATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGG GTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACATTTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTCTTT GGTGT GGCATTTTACCGGGGAGCTGACTNGCTGTGTCCTTGGTATATGATGTCAATGGTTACCAAGTCATTTGAAAGGCTCAANAGCTGGCG ] [+] EMBL OSR23601A [ TCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGG GTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTNATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTT ] [+] EMBL OSS14670A [ CTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGG GTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTNAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TTGGGTGT GGCATTTTACCGGGGAGCTGACT NCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT TAGG ATTCCTAATTCAAGNTAG CCATCAGATCCAGA ] [+] EMBL AU056253 [ TCGCCTTCTCCTCCTCCTCCTCTTCTCCCTCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGTGGAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCAT ] [+] EMBL CF309075 [ gagtagaaaCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTTCTCAAGGTCATCATCCTCGGTGACAGCTGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGG ] [+] EMBL CF305140 [ TCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTG ] [+] EMBL CA766593 [ caggggtnGCAATC GTACAAAGCGACGATCGGCGCGGATTTCCTGACC AGGAGGTGCAGATCGACGACCGGCTCTTCACA TTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTC AGAGTC TT GGTGT GGCATTTTACCGGGGAGCTGACT GCTGTGTTCTT GTATATGATGTCAAT GTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGT GAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGCTTGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGNTTGATTGCTGCA ] [-] EMBL CF334082 [ GGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTAaaaaaa ] [+] EMBL AU056254 [ TTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAA ] [+] EMBL AU096657 [ TAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATNTGTATCTATATGGCTTGCTACTTGCTAAAAAAAaaa ] [+] EMBL BM038537 [ GCTTTCAAG ATGAACCGGAAGAGGAGATATATCTTCCTGAT AATTGATGTTGGAGGTGC TGGAAGGC ACAGCGCTCGTCA GCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCNCACCTCTTCCCCTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCC ACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCNTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCCAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA C ACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAATACAATCCTTCCATTATGTCTTTGAAAAAAAAAA ] [-] EMBL CF295449 [ GTTGGAGGTGC TGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCCGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGAATGATTCAGTGCATATCTGGAAAAAACAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATATGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGATACTTGCTAATACAATACTTCCATTATGTCTAAAAAAAAAAAAAAAAAAACAC] [+] EMBL AU174071 [ AGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCNCTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGCGGTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAAaaa ] [+] EMBL AU184462 [ GATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAGATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCT ATCTATGTCCA ATGCTACATATTGT TTTTTTA GTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAAa ] [+] EMBL BI809721 [ GCCTCTGATCTATGTCCACATGCGACATATTGTGTTTTTTAGGTGCTCCAACATAATTGGAGAAGATTCATTTGTAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGA TTGGGATACC TTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCCAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACCAACCTATCCATCTGGTTCTGTTCTCTGCCCCTTTTGATGGTAGAGC GTGCCCAGATCTGTATCTATATGGCTTGCTACTTGCTAAAAAAAaaa ] [-] EMBL CF309074 [ AGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAA CAACCTATCAATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGC GTG CCAGATCTGTAaaaaaaaaa ] consensusID : consensus_15464#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence [TAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGTTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTGCCGTTCCTTACCAAAGGGCAAATTCT] [+] EMBL CF297891 [TAACTGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTTTCTACCCTTCTGTTTGATTGTTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGCATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTGCCGTTCCTTACCAAAGGGCAAATTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15464#0 CCTCCAAAAAAAAACGCCTTTTTTTTTCTTGAGCACACAAGAGACGCCAATCCCAAAGCA 60 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 AAGAGAAGCGCAAAGATCATCTCTTTGCTTCTCGCCTTCTCCTCCTCCTCCTCTTCTCCC 120 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 TCCTCGTGCTCCGCCCGATCCGTCCGCCGCCTCCAGATCCGCGCCCATGGCGTCGCGCAG 180 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 GCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGAT 240 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 GAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTT 300 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 CCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACATTGCAGATTTGGGACACAGC 360 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 GGGACAGGAGCGATTTCAGAGTCTTGGTGTGGCATTTTACCGGGGAGCTGACTGCTGTGT 420 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 TCTTGTATATGATGTCAATGTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGTGAGGA 480 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 ATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAA 540 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 CAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTG 600 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 GTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGT 660 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 GGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGAT 720 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 ATATCTTCCTGATACAATTGATGTTGGAGGTGCTGGAAGGCAACAGCGCTCGTCAGGCTG 780 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 TGAATGCTAGAAGATATGGCACCAGCGATATCGCCAGTTGATTCTACCGGATCGGTGTAG 840 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 ATCATCATCCTCACCTCTTCCACTGTGTGATATCTTTAGTTTGAAAGCCTCTATCTATGT 900 consensus_15464#1 ------------------------------------------------------------ consensus_15464#0 CCAATGCTACATATTGTTTTTTTAGTGCTCCAACATAATTGGAGAAGATTCATTTGTAAC 960 consensus_15464#1 --------------------------------------------------------TAAC 4 **** consensus_15464#0 TGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTT 1020 consensus_15464#1 TGTTTTTACTCCTACCTTTGTATCTGCTAGATGCTAGAGTTGGGATACCTTTTTAGTCTT 64 ************************************************************ consensus_15464#0 TCTACCCTTCTGTTTGATTGCTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGC 1080 consensus_15464#1 TCTACCCTTCTGTTTGATTGTTGCAGTGCACATATCTTTTCTGTTTGATTGCTTCAGTGC 124 ******************** *************************************** consensus_15464#0 ATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAACCTATC 1140 consensus_15464#1 ATATCTGGAGAGACCAAAACATGTTCTGTGAAAGCTTGTAAATTGACAGAACAAAAAAAA 184 ****************************************************** * consensus_15464#0 AATCTGGTTCTGTTCTCTGCCCATTTTGATGGTAGAGCGTGCCAGATCTGTATCTATATG 1200 consensus_15464#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCT-TG 243 ** * * * * * * * * * ** consensus_15464#0 GCTTGCTACTTGCTAAAAAAATACTTCCATTATGTCTTTGAAAAAAAAAAAAAAAACAC 1259 consensus_15464#1 TCTTGCCGTTCCTTACCAAAGGGCAAATTCT---------------------------- 274 ***** * ** *** * * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||