cluster # 1547

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Oryza sativa
cluster # 1547 cluster # 1547 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1547#0 length = 431 sequences # 2

consensusID : consensus_1547#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 431
fasta sequence

                              [AATTGGTGTACTGGGATGGCAACTTCGATGAACCGGCCCAATTGGTGTATGGTGATCGAGATGGGGCTGTTAATCTGATTAGCATGTTAGCGTTCAACGAGGAGATGCGTCGGCAGCCAGGACAGAGGGGGCAATT--CAA-GT--CGA-TCAA-GGTCGAAAACGCTTCCCATAGG-GGGATTCTTACGGATGAATGGGCGCTAAAGAGGGTCATGCAAGAGATTCTTGAAGCGAATCGGGA-TTCTTCGTAGGCTATTGTGCTTATAAAACTTCTGTTTGAATTGATTTACAA-GTATGTACACCGGTGGTTCCCTAAATTGGGATTCTCTAGTATTCTTTTGT-GAATCGGGGTATGTATAGGGAAGAAAGATTGATATATGTATCATCCATACCATTTG-ACACATGAAAAATGTTGCATATTTCCCATTGTAAAAAAA]

[+] EMBL AU173986             [AATTGGTGTACTGGGATGGCAACTTCGATGAACCGGCCCAATTGGTGTATGGTGATCGAGATGGGGCTGTTAATCTGATTAGCATGTTAGCGTTCAACGAGGAGATGCGTCGGCAGCCAGGACAGAGGGGGCAATT  CAA GT  CGA TCAA GGTCGAAAACGCTTCCCATAGG GGGATTCTTACGGATGAATGGGCGCTAAAGAGGGTCATGCAAGAGATTCTTGAAGCGAATCGGGA TTCTTCGTAGGCTATTGTGCTTATAAAACTTCTGTTTGAATTGATTTACAA GTATGTACACCGGTGGTTCCCTAAATTGGGATTCTCTAGTATTCTTTTGT GAATCGGGGTATGTATAGGGAAGAAAGATTGATATATGTATCATCCATACCATTTG ACACATGAAAAATGTTGCATATTTCCCATTGTAAAAAAA]
[+] EMBL AU095839             [                                                                                                                         gCAGTGGNTCCAATTTCCAATGTCNCGATTCAACGGTCGAAAACGCTTCCCATAGGNNGGATTCTTACGGATGAATGGGCGCTAAAGAGGGTCATGCAAGAGATTCTTGAAGCGAATCGGGACTTCTTCGTAGGCTATTGTGCTTATAAAACTTCTGTTTGAATTGATTTACAACGTATGTACACCGGT GTTCCCTAAATTGGGATTCTCTAGTATTCTTTTGTNGAATCGGGGTATGTATAGGGAAGAAAGATTGATATATGTATCATCCATACCATTTGNACACATGAAAAATGTTGCATATTTCCCATTGTAA     ]




>consensus_1547#0
AATTGGTGTACTGGGATGGCAACTTCGATGAACCGGCCCAATTGGTGTATGGTGATCGAG
ATGGGGCTGTTAATCTGATTAGCATGTTAGCGTTCAACGAGGAGATGCGTCGGCAGCCAG
GACAGAGGGGGCAATTCAAGTCGATCAAGGTCGAAAACGCTTCCCATAGGGGGATTCTTA
CGGATGAATGGGCGCTAAAGAGGGTCATGCAAGAGATTCTTGAAGCGAATCGGGATTCTT
CGTAGGCTATTGTGCTTATAAAACTTCTGTTTGAATTGATTTACAAGTATGTACACCGGT
GGTTCCCTAAATTGGGATTCTCTAGTATTCTTTTGTGAATCGGGGTATGTATAGGGAAGA
AAGATTGATATATGTATCATCCATACCATTTGACACATGAAAAATGTTGCATATTTCCCA
TTGTAAAAAAA

clustalw multiple alignements is not computed in this case