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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15483#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1046 fasta sequence
[GGAAAATCTCCCATCTCTGTCTCCTCCGCTCCGCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT-GAGAACAAACCTA-AAGGTGGTA-GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC-TTGA-GGGGGAAGAAAGGAGCGAGGCTC-GGGGACACTATAA-TTGGATC-TGT-CAAGGAAGCACAG-CCTCGT-GGTAAGG-TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG-CGAGAT-CCA-GTTTGATGACAACG-CGATT-GTCCTTGTGAACAAC-AAAGGCGAG-CTGATTGGCACTCGT-GTATTTGGTCCTGTT-CCCCACGAACTCAGGAAAAAGAAGCATC-TCAAG-ATCCTAGCGTTAGCGGAACACATAG-TTTGAGATGCTTACATACCTGG--CAACCT-ACCT-GTT-AGTTCT-GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC-AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF331087 [GGAAAATCTCCCATCTCTGTCTCCTCCGCTCCGCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAG ]
[+] EMBL CF316528 [ CCCATCTCTGTCTCCTCCGCTCCGATCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCATAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGCCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGATAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACGAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGC ]
[+] EMBL CF329017 [ CATCTCTGTCTCCTCCGCTCCGCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA T ]
[+] EMBL CF331747 [ gagtagaaaCTCCTTCGCTCCGCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT C ]
[+] EMBL AK059735 [ TCCTCCGCTCCGCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT CCA GTTTGATGACAACG CGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGG ]
[+] EMBL AK098937 [ CTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT CCA GTTTGATGACAACG CGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGG ]
[+] EMBL AK104805 [ CCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT CCA GTTTGATGACAACG CGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTG ]
[+] EMBL CF319052 [ CCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT CCA GTTTGATGACAACG CGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATCGGCACTCGT GTA ]
[+] EMBL OSR01211A [ TTGCGCCGCCAAGACGAGTCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACNATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGAGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAACTCAGAACATTAATCCAGNT GAGAACAAACCTACAAGGTGGTAGGCCAACTCTGGTGCCAAG ]
[+] EMBL OSC09962A [ GCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCTCCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGGGTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGATNGAGNACAAACCTA AAGGTGGTA GACAACT ]
[+] EMBL AU058339 [ AGGTCAAAATGTTCGTCAGTTGGACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGAAACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACATTCATCCAGAT GAGAACAAACCTA AAGGTGGTA GACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCCTTTGAGGGGGGAAGAAAGGAGCGAGGCTCGGGGGACACTATAATTTGGATCTTGTCCAAGGAAGCACAG CTCCTGGGTAAGGTTGAA ]
[-] EMBL CF331746 [ GTGCATCCAGTCC TTGA GGGGGAAGAAAGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAGCCCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT CCA GTTTGATGACAACG CGATTGGTCCTTGTGAACAACAAAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAAaaa ]
[-] EMBL CF331088 [ AGGAGCGAGGCTC GGGGACACTATAA TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG CGAGAT CCA GTTTGATGACAACG CGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCCAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAaaa ]
[+] EMBL CB096970 [ A TTGGATC TGT CAAGGAAGCACAG CCTCGT GGTAAGG TGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAG TGAGAT CCA GTTTGATGACAACG CGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG GTCCTAGCGTTAGCGGAACACATAG TTTGAGATGTTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTT ]
[+] EMBL AU166192 [ ACGCAACGATGGCAGCCGAGATCCCAGGTTTGATGACAACGCCGATT GTCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGTGGTATTTGGTCCTGTTCCCCCACGAACTCAGGAAAAAGAAGCATCTTCAAGNATCCTAGCGTTAGCGGAACACATAGTTTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCAAAAAAAA ]
[+] EMBL AU181754 [ TCCTTGTGAACAAC AAAGGCGAG CTGATTGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCATGTGTTAAAAAAA ]
[-] EMBL CF319053 [ ACAAC AAAGGCGAGTCTGATCGGCACTCGT GTATTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG ATCCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAaaaa ]
[+] EMBL AU081355 [ TTTGGTCCTGTT CCCCACGAACTCAGGAAAAAGAAGCATC TCAAG AACCTAGCGTTAGCGGAACACATAG TTTGAGATGCTTACATACCTGG CAACCT ACCT GTT AGTTCT GCAGAATGAAATGAGCATGGTGCTGTCTCAAGAGTATTCCACCGTTGTTTTGATC AGTTCTGTTTGCAATAATGTACCCTCAAAAGATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99590 [ caATACCTGGGCCAACCTCACCTCGTTNAGTTCTGGCAGATTGAANCGAGCATGGTGCTGTCTCAAGAGTATCCCACCGTTGTTTTNATCTAGTTCTGTTTGCAATAATGTACCCTCAAAAGATNAAATGAGCTGATNCCCTGCAGTCAGTCCTAGACAAATCAGATNCTGTACTACTATTTAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCATGTGTTAAAAAAAAAAAAAAAAAA ]
[+] EMBL C98189 [ GTGCTGTNTCAAGAGTATNCCACCGTTGTTTTGATC AGTTCTGTTTGNAATAATGTACCCTCAAANGATTNAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATTNAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTTGTTAAACCTGNAACTGNAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCAAAAAAA ]
consensusID : consensus_15483#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence
[GNNTNNGNNANTNCGCGTNANTNCTNTNTNTAGGCCAGAANTCCANGAACATTCATCCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCAAGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAGCGAGATCCAGTTTGATGACAACGCGATTGTCCTTGTGACAACAAAGGCGACTTATTTGACTCGTGTATTTTGTCCTGTTCCCACGGACTCAGGAAAAGAGNATTTAAGTCCTAGCTNGGGGAACAATAGTTTAGATNTTCATACCTGGAACTNCTTTAG]
[+] EMBL AU197317 [GNNTNNGNNANTNCGCGTNANTNCTNTNTNTAGGCCAGAANTCCANGAACATTCATCCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCAAGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGACGCAACGATGGCAGCGAGATCCAGTTTGATGACAACGCGATTGTCCTTGTGACAACAAAGGCGACTTATTTGACTCGTGTATTTTGTCCTGTTCCCACGGACTCAGGAAAAGAGNATTTAAGTCCTAGCTNGGGGAACAATAGTTTAGATNTTCATACCTGGAACTNCTTTAG]
consensusID : consensus_15483#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[NNTNNGNATTCCNCTTGAGTCCATNTNTNCANGCCANAANTCNANGANACANTTCATTCCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCAAGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGCGNAACGATGGAGCGAGTCCAGTTTTATGCAACGCNTTGTCCTTGTGACAACAAAGNCGACTGATTGGACTCGTGTATTTGGCCTGTTCCCACGACTCAGGAAAAGAGATNTAAGTCCTAGCGTNGGGACA]
[+] EMBL AU094697 [NNTNNGNATTCCNCTTGAGTCCATNTNTNCANGCCANAANTCNANGANACANTTCATTCCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCATCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCAAGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCCGTGCTGCTATGAAGCGAGGCGNAACGATGGAGCGAGTCCAGTTTTATGCAACGCNTTGTCCTTGTGACAACAAAGNCGACTGATTGGACTCGTGTATTTGGCCTGTTCCCACGACTCAGGAAAAGAGATNTAAGTCCTAGCGTNGGGACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 GGAAAATCTCCCATCTCTGTCTCCTCCGCTCCGCTCCGCTCCTTGCGCCGCCAAGACGAG 60
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 TCGCGGCTGAACATAACAGGGGAGGGGCGGCGATCTCCCTCTCCATCTCCATCTCCATCT 120
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 CCATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTCACCTGGAAAGTGTGG 180
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 GTAAAGCGCAGGGCAACAAGAAATGGCAGCATTCCTGAGGTCAAAATGTTCGTCAGTTGG 240
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 ACGTACCTTGATGGGAGGCCTTGGGAACAATCTATTTGGAGCCGTTAACTCATCTGTTGA 300
consensus_15483#1 -GNNTNNGNNANTNCGCGTNANTNC-TNTNTNTAGGCCAGAANTCCANGAAC--ATTCAT 56
consensus_15483#2 ---NNTNNGNATTCCNCTTGAGTCCATNTNTNCANGCCANAANTCNANGANACANTTCAT 57
consensus_15483#0 AACGGTGTCAAGACCATCTCATTGTGATCCTATCTTTCAGCAAATCAGAACA---TTCAT 357
* * * * * * ** * * * *****
consensus_15483#1 -CCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCA 115
consensus_15483#2 TCCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCA 117
consensus_15483#0 -CCAGATGAGAACAAACCTAAAGGTGGTAGACAACTCTGGTGCCAAGCGCGTTATGTGCA 416
***********************************************************
consensus_15483#1 TCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCA 175
consensus_15483#2 TCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCA 177
consensus_15483#0 TCCAGTCCTTGAGGGGGAAGAAAGGAGCGAGGCTCGGGGACACTATAATTGGATCTGTCA 476
************************************************************
consensus_15483#1 AGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCC 235
consensus_15483#2 AGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCC 237
consensus_15483#0 AGGAAGCACAGCCTCGTGGTAAGGTGAAGAAAGGAGATGTGGTCTATGGAGTGGTTGTCC 536
************************************************************
consensus_15483#1 GTGCTGCTATGAAGCGAGGACGCAACGATGGCAGCGAGATCCAGTTTGATGACAACGCGA 295
consensus_15483#2 GTGCTGCTATGAAGCGAGG-CGNAACGATGG-AGCGAG-TCCAGTTTTATG-CAACGCN- 292
consensus_15483#0 GTGCTGCTATGAAGCGAGGACGCAACGATGGCAGCGAGATCCAGTTTGATGACAACGCGA 596
******************* ** ******** ****** ******** *** ******
consensus_15483#1 TTGTCCTTGTGA-CAACAAAGGCGA-CTTATTTG-ACTCGTGTATTTTGTCCTGTTCCC- 351
consensus_15483#2 TTGTCCTTGTGA-CAACAAAGNCGA-CTGATTGG-ACTCGTGTATTTGG-CCTGTTCCC- 347
consensus_15483#0 TTGTCCTTGTGAACAACAAAGGCGAGCTGATTGGCACTCGTGTATTTGGTCCTGTTCCCC 656
************ ******** *** ** *** * ************ * *********
consensus_15483#1 ACGGACTCAGGAAAAGAGNA----TTTAAGTCCTAGCTNGGG--GAACA-ATAGTTTAGA 404
consensus_15483#2 ACG-ACTCAGGAAAAGAGA-----TNTAAGTCCTAGCGTNGG--GA-CA----------- 387
consensus_15483#0 ACGAACTCAGGAAAAAGAAGCATCTCAAGATCCTAGCGTTAGCGGAACACATAGTTTGAG 716
*** *********** * * ******* * ** **
consensus_15483#1 ---TNTTCATACCTGGAACTNCTTTAG--------------------------------- 428
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 ATGCTTACATACCTGGCAACCTACCTGTTAGTTCTGCAGAATGAAATGAGCATGGTGCTG 776
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 TCTCAAGAGTATTCCACCGTTGTTTTGATCAGTTCTGTTTGCAATAATGTACCCTCAAAA 836
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 GATTAAATGAGCTGATGCCCTGCAGTCAGTCCTAGACAAATCAGATTCTGTACTACTATT 896
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 TAACCTCTGTAGTATTGCATTCCATTCAGATGGAAACGCATACATTGCTTATGTTCTCTT 956
consensus_15483#1 ------------------------------------------------------------
consensus_15483#2 ------------------------------------------------------------
consensus_15483#0 GTTAAACCTGAAACTGCAACTGAACTCTTGTGCTTTCTGATCTCAAAGTGTTTCGGTTCA 1016
consensus_15483#1 ------------------------------
consensus_15483#2 ------------------------------
consensus_15483#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1046
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||