Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 15485 cluster # 15485       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15485#0 length = 2431 sequences # 6  
consensus_15485#1 length = 2344 sequences # 15  
consensus_15485#2 length = 224 sequences # 1  

consensusID : consensus_15485#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2431
fasta sequence
                              [TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGTCACGTACTGTATCCTGGGGACGAATCACCAGAAGGGAAAGTTCTTCGCCTGAAGCAACAATATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGTGATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCACCCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGGAATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCTGAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAAATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAAGATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTACCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAATTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACTGTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTTGTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCTAAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAATGGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAGATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGGTTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTTTTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCAGAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAAACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAGTATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAAATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAAGCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCTACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTATAATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACTGCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTTATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTTTTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCAGGGAAAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGAATGCCAGGAGAAGGTTGATAAAGCATACCGCGATCAGAAACTATGGA-CAAGGATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGC-AACCGGTGATGCGATG-ACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCT-GGAACTATGCAAATTGTAGCCGTGTTGCCTA-GCCT-GGAACACCCTT-GTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATT--CTGAA-GTGAAA-CCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTT-ACAATCTCCGAGATGTGCTATA-T-GGAATTCTGCATTGATATGTTCTTTTTTAAAAAGTGAGTAAAATGGGATATGCTGAATGATGGCGAATTGGCGAGGATCAAAA]

[+] EMBL AK063766             [TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGTCACGTACTGTATCCTGGGGACGAATCACCAGAAGGGAAAGTTCTTCGCCTGAAGCAACAATATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGTGATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCACCCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGGAATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCTGAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAAATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAAGATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTACCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAATTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACTGTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTTGTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCTAAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAATGGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAGATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGGTTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTTTTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCAGAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAAACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAGTATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAAATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAAGCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCTACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTATAATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACTGCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTTATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTTTTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCAGGGAAAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGAATGCCAGGAGAAGGTTGATAAAGCATACCGCGATCAGAAACTATGGA CAAGGATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGC AACCGGTGATGCGATG ACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCT GGAACTATGCAAATTGTAGCCGTGTTGCCTA GCCT GGAACACCCTT GTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATT  CTGAA GTGAAA CCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTT ACAATCTCCGAGATGTGCTATA T GGAATT                                                                             ]
[+] EMBL BI794970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAACTATGGACCAAGGATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGC AACCGGTGATGCGATG ACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCT GGAACTATGCAAATTGTAGCCGTGTTGCCTA GCCT GGAACACCCTT GTTTTACCTGTAATGTGTA CAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATT  CTGAA GTGAAA CCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTT AC ATCTCCGAGATGTGCTATA T GGAATTCTGCATTGATATGTTCTTTTTTTGCATGTGAGTAAAATGGGATATGCTGAATGATGGCGAATTGGCGAGGATCAAAA]
[+] EMBL BI798008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGC AACCGGTGATGCGATG ACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCTGGGAACTATGCAAATTGTA CCGTGTTGCCTACGCCTGGGAACACCCTTGGTTTTACCTGTAATGTGTA CAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATTTCCTGAACGTGAAACCCATAGTTAAAAGGGATCGGTTAGT GCATCCTTTCACAATCTCCGAGATGTGCTATA C GGAATTCTGCATTGATATGTTCTTTTTTAAAAA                                                  ]
[+] EMBL BI798006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGC AACCGGTGATGCGATG ACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCT GGAACTATGCAAATTGTAGCCGTGTTGCCTACGCCT GGAACACCCTT GTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATT  CTGAA GTGAAA CCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTT ACAATCTCCGAGATGTGCTATA T GGAATTCTGCATTGATATGTTCTTTTTTAAAAA                                                  ]
[+] EMBL BI798013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGC AACCGGTGATGCGATG ACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCT GGAACTATGCAAATTGTAGCCGTGTTCCCTA GCCT GGAACACCCTT GTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATT  CTGAA GTGAAA CCATAGTTAAAAGGGATCGGTTAGTGGCATCCTGT ACAATCTCCGAGATGTGCTATACT GGAATTCTGCATTGATATGTTCTTTTTTAAAAA                                                  ]
[+] EMBL BI798004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGAGCTAAGGTGCGCGCAAACCGGTGATGCGATGTACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGC TTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAGGCTTCGATAAAACGCT GGAACTATGCAAATTGTA CCGTGTTGCCTACCCCT GGAACACCCTT GTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATT  CTGAA GTGAAA CCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTT ACAATCTCCGAGATGTGCTATA TCCCACTTCTGCATTGATATGTTCTTTGTTAAAAA                                                  ]


>consensus_15485#0 TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGT CACGTACTGTATCCTGGGGACGAATCACCAGAAGGGAAAGTTCTTCGCCTGAAGCAACAA TATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGT GATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCAC CCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGG AATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCT GAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAA ATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAA GATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTA CCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAA TTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACT GTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTT GTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCT AAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAAT GGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAG ATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGG TTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTT TTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCA GAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAA ACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAG TATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAA ATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAA GCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCT ACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTAT AATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACT GCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTT ATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTT TTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCAGGGA AAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTT GGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGT GCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGAATGCCAGGAGAAGGTT GATAAAGCATACCGCGATCAGAAACTATGGACAAGGATGTCAATCCTCAACACAGCCAGT TCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATC AAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACC TTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGCTCTCC TTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAG GCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCC TTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATTC TGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTTACAATCTCCGAGATG TGCTATATGGAATTCTGCATTGATATGTTCTTTTTTAAAAAGTGAGTAAAATGGGATATG CTGAATGATGGCGAATTGGCGAGGATCAAAA



consensusID : consensus_15485#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 2344
fasta sequence
                              [TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGTCACGTACTGTATCCTGGGGACGAATCACCAGAGGGGAAAGTTCTTCGCCTGAAGCAACAATATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGTGATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCACCCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGGAATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCTGAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAAATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAAGATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTACCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAATTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACTGTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTTGTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCTAAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAATGGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAGATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGGTTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTTTTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCAGAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAAACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAGTATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAAATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAAGCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCTACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTATAATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACTGCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTTATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTTTTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCA-GGGAAAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGA-ATGCCAGGAGAAGGTTGATAAAGCA-TACCGCGATCAGAAACTATGGACAAGG-ATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA-GCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAG-CAAGTTCAGTT-CAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATAT-GGAATTCTGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGTGGAAAAAAAAAAAAGAAAAAAAAAAAAAA]

[+] EMBL AF327055             [TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGTCACGTACTGTATCCTGGGGACGAATCACCAGAGGGGAAAGTTCTTCGCCTGAAGCAACAATATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGTGATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCACCCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGGAATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCTGAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAAATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAAGATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTACCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAATTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACTGTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTTGTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCTAAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAATGGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAGATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGGTTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTTTTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCAGAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAAACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAGTATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAAATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAAGCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCTACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTATAATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACTGCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTTATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTTTTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCA GGGAAAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGA ATGCCAGGAGAAGGTTGATAAAGCA TACCGCGATCAGAAACTATGGACAAGG ATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA GCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAG CAAGTTCAGTT CAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATAT GGAATTCTGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGTGGCAAAAAAAAAAAGAAAAAAAAAAAAAA]
[+] EMBL AU225214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gccgcTATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTTTTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGATANANCCCA NGGAAAGTTTGTGCCTGACCCANGATTCNAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACNATGACTTGATGGGTTCTCTGGAANGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AA751434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTTTTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCA GGGAAAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AA751588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gAAACTTTTTCCTTTTTGGTGCTGA GCACATGAAATTGCTGGTTTAAGGAAANAAAGAGCCCAGGGGAAAGTTTGTGCCTGA CCAAGATTCGAAGAGGTTAAGANATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTNGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAAACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGA ATGCCAGGAGAAGGTTGATAAAGCA TACCGCGATCAGAAACTATGGACAAGG ATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGANTNCGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACA GCAAGGCAAGCACTA NCCACTCCCTGCCAGCGAACTTCANAGCTAAGGTGCGCGCAACCGGTGATGCNATGACAGCATCTGCCTCCCANCTCTCCTTGGCAGGAAGGTTTCNCTTTGCTCCCANTTTTGAATAAACANAAA CAAGTTCAGTTCCAGGCTTCNATAAAACGCTGGAACTATNCCAATTGTTACCGTGTTGCCTANCCTGGAACACCCTTGTTTTACCTGTTATGTntttccac                                                                                                   ]
[+] EMBL OSC25402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGA ATGCCAGGAGAAGGTTGATAAAGCA TACCGCGATCAGAAACTATGGACAAGG ATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCAT                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AA750576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTTGGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGCAAATGAAGCTTATGGGCGTGCAGACTATTTCCTTGTTGGTAAAGATTTCCCCAGCTACATTGATATGCCAGGAGAAGGTTGCTAAAGAATTACCGCGATCAGTAACTGTGGCCAAGGTCTGTCAATCCTGAACACAGACA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AA750511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGTGCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGA ATGCCAGGAGAAGGTTGATAAAGCA TACCGCGATCAGAAACTATGGACAAGG ATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACA                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU091850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCAGGAGAAGGTTGATAAAGCA TACCGCGATCAGAAANTATGGACAAGG ATGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA GCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAG CAAGTTCAGTT CAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCCTTGTTTTACCTGTAATGTGTAGCAGCCNNTGCTGATCAGCTCATGTGg                                                                             ]
[+] EMBL AA750236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTCAATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA GCCACTCCCTGCCAGCGACCTTCA                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AA750937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATCCTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA GCCACTCCCTGCCAGCGGCCTT                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AA750641             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTCAACACAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA GCCA TCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCT CCAGCTCT CTTGGCAGGA  GTTTCGCTTTGCT CCAGTTTTGA                                                                                                                                                                                                                    ]
[+] EMBL AA749642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ctGCGACNNGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACNGGCAAGGCAAG                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AA752622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTA GCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCCCSCMACCGGTGATGCGATGACAGCATCTKSCTCCCAGCTCTYCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCCMAGTTCAGTT CAGGCTTCGATAAAACSCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGRCTGGAACACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGAWCAGCTCATGTGCTATATGGGRATTCTBAAGTG AAHCMTAGTTAAAAGGGRTCGGTTAGTGG                           ]
[+] EMBL BI798514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGCAATC TTAGGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAG CAAGTTCAGTT CAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATAT GGAATTCTGAACTGAAACCATAGTTAAAAGGGATCGGTTAaaaaa                          ]
[-] EMBL AU225801             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgctTGCCTCCCAGCTCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAG CAAGTTCAGTT CAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATAT GGAATTCTGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGagcggc                        ]


>consensus_15485#1 TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGT CACGTACTGTATCCTGGGGACGAATCACCAGAGGGGAAAGTTCTTCGCCTGAAGCAACAA TATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGT GATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCAC CCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGG AATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCT GAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAA ATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAA GATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTA CCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAA TTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACT GTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTT GTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCT AAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAAT GGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAG ATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGG TTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTT TTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCA GAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAA ACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAG TATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAA ATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAA GCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCT ACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTAT AATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACT GCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTT ATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTT TTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCAGGGA AAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTT GGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGT GCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGAATGCCAGGAGAAGGTT GATAAAGCATACCGCGATCAGAAACTATGGACAAGGATGTCAATCCTCAACACAGCCAGT TCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATC AAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACC TTCAGAGCTAAGGTGCGCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGCTCTCC TTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAGTTCAG GCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAACACCC TTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGGAATTC TGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGTGGAAAAAAAAAAAAGAAAAAAAAAA AAAA



consensusID : consensus_15485#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence
                              [CAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTTAGCCTAGCNCAACCGGTGATGCGATGCAGCATCTNCCTCCAGCTCTCCTTNNCGGAAGGTTTNTTTNTCCAGTTTATAGAG]

[+] EMBL AA750000             [CAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACCTTCAGAGCTAAGGTTAGCCTAGCNCAACCGGTGATGCGATGCAGCATCTNCCTCCAGCTCTCCTTNNCGGAAGGTTTNTTTNTCCAGTTTATAGAG]


>consensus_15485#2 CAGCCAGTTCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCT GGGACATCAAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGC CAGCGACCTTCAGAGCTAAGGTTAGCCTAGCNCAACCGGTGATGCGATGCAGCATCTNCC TCCAGCTCTCCTTNNCGGAAGGTTTNTTTNTCCAGTTTATAGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15485#0      TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGT 60
consensus_15485#1      TTTAATGCTGGAGATCATGCAAGTGCATATGAAGCTCATCTAAATGCTGAAAAGATATGT 60
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      CACGTACTGTATCCTGGGGACGAATCACCAGAAGGGAAAGTTCTTCGCCTGAAGCAACAA 120
consensus_15485#1      CACGTACTGTATCCTGGGGACGAATCACCAGAGGGGAAAGTTCTTCGCCTGAAGCAACAA 120
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      TATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGT 180
consensus_15485#1      TATACATTATGCTCAGCCTCACTACAGGATATTATTGCTCGTTTCGAGAGGAGAGCTGGT 180
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCAC 240
consensus_15485#1      GATTCTCTCAGCTGGGAGGACTTCCCCTCTAAAGTTGCAGTGCAGATGAATGACACTCAC 240
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      CCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGG 300
consensus_15485#1      CCAACACTGTGCATTCCTGAGTTGATGAGAATATTGATTGATGTTAAAGGGTTAAGCTGG 300
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      AATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCT 360
consensus_15485#1      AATGAGGCTTGGAGTATCACAGAAAGAACTGTGGCATACACAAACCACACGGTGCTTCCT 360
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAA 420
consensus_15485#1      GAAGCTCTGGAGAAGTGGAGCTTGGACATAATGCAGAAACTTCTTCCTCGGCATGTTGAA 420
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAA 480
consensus_15485#1      ATCATAGAAAAAATTGATGGGGAGCTGATGAACATCATTATCTCAAAATACGGAACAGAA 480
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTA 540
consensus_15485#1      GATACTTCACTGTTAAAAAAGAAGATTAAAGAAATGAGAATCTTAGACAACATTGACCTA 540
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      CCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAA 600
consensus_15485#1      CCAGATTCTATTGCCAAACTATTTGTGAAACCAAAAGAGAAAAAAGAATCTCCTGCTAAA 600
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      TTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACT 660
consensus_15485#1      TTGAAAGAGAAATTGCTTGTCAAATCTCTGGAGCCTAGTGTTGTGGTTGAGGAGAAAACT 660
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTT 720
consensus_15485#1      GTGTCCAAAGTAGAGATAAACGAGGACTCTGAGGAGGTGGAGGTAGACTCTGAAGAAGTT 720
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCT 780
consensus_15485#1      GTGGAGGCAGAAAACGAGGACTCTGAGGATGAGTTAGATCCATTTGTAAAATCAGATCCT 780
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      AAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAAT 840
consensus_15485#1      AAATTACCTAGAGTTGTCCGAATGGCTAACCTTTGTGTTGTTGGTGGGCATTCGGTTAAT 840
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAG 900
consensus_15485#1      GGTGTGGCTGCGATTCACAGCGAGATTGTGAAAGAAGATGTATTCAACAGCTTTTATGAG 900
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGG 960
consensus_15485#1      ATGTGGCCCGCTAAATTTCAAAATAAAACAAATGGAGTGACTCCTAGACGTTGGATTCGG 960
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      TTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTT 1020
consensus_15485#1      TTTTGTAATCCTGAATTAAGTGCAATCATTTCAAAATGGATAGGATCTGATGATTGGGTT 1020
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      TTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCA 1080
consensus_15485#1      TTGAACACTGATAAACTTGCTGAATTAAAGAAGTTTGCTGATGATGAGGATCTGCAATCA 1080
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAA 1140
consensus_15485#1      GAATGGCGTGCTGCTAAAAAGGCTAACAAGGTGAAGGTTGTTTCTCTCATAAGAGAAAAA 1140
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAG 1200
consensus_15485#1      ACAGGATATATCGTCAGTCCAGATGCAATGTTTGACGTTCAGGTGAAAAGGATCCATGAG 1200
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      TATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAA 1260
consensus_15485#1      TATAAGCGACAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAA 1260
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAA 1320
consensus_15485#1      ATGAGTGCAAAAGACAGAATAAATAGCTTTGTTCCAAGGGTATGCATATTTGGTGGGAAA 1320
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCT 1380
consensus_15485#1      GCATTTGCCACTTACGTACAGGCAAAGAGGATAGTGAAGTTTATTACAGATGTTGCAGCT 1380
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTAT 1440
consensus_15485#1      ACTGTAAATCATGATCCAGAAATTGGAGATCTATTGAAGGTTGTATTTATTCCAGATTAT 1440
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      AATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACT 1500
consensus_15485#1      AATGTTAGTGTTGCTGAGGCGCTAATCCCTGCCAGTGAATTGTCTCAGCATATCAGTACT 1500
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTT 1560
consensus_15485#1      GCTGGAATGGAAGCTAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGATGTATCCTT 1560
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTT 1620
consensus_15485#1      ATTGGAACTTTGGATGGTGCTAATGTGGAAATCAGAGAGGAGGTTGGAGAGGAAAACTTT 1620
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      TTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCAGGGA 1680
consensus_15485#1      TTCCTTTTTGGTGCTGAGGCACATGAAATTGCTGGTTTAAGGAAAGAGAGAGCCCAGGGA 1680
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      AAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTT 1740
consensus_15485#1      AAGTTTGTGCCTGACCCAAGATTCGAAGAGGTTAAGAGATTTGTCCGCAGTGGGGTCTTT 1740
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGT 1800
consensus_15485#1      GGAACTTACAACTACGATGACTTGATGGGTTCTCTGGAAGGAAATGAAGGTTATGGGCGT 1800
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGAATGCCAGGAGAAGGTT 1860
consensus_15485#1      GCAGACTATTTTCTTGTTGGTAAAGATTTCCCCAGCTACATTGAATGCCAGGAGAAGGTT 1860
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      GATAAAGCATACCGCGATCAGAAACTATGGACAAGGATGTCAATCCTCAACACAGCCAGT 1920
consensus_15485#1      GATAAAGCATACCGCGATCAGAAACTATGGACAAGGATGTCAATCCTCAACACAGCCAGT 1920
consensus_15485#2      ----------------------------------------------------CAGCCAGT 8
                                                                           ********

consensus_15485#0      TCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATC 1980
consensus_15485#1      TCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATC 1980
consensus_15485#2      TCCTCCAAGTTCAACAGCGACCGGACGATTCACGAGTACGCCAAGGACATCTGGGACATC 68
                       ************************************************************

consensus_15485#0      AAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACC 2040
consensus_15485#1      AAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACC 2040
consensus_15485#2      AAGCCTGTCATCCTGCCCTAGACAGGCAAGGCAAGCACTAGCCACTCCCTGCCAGCGACC 128
                       ************************************************************

consensus_15485#0      TTCAGAGCTAAGGT--GC---GCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGC 2095
consensus_15485#1      TTCAGAGCTAAGGT--GC---GCGCAACCGGTGATGCGATGACAGCATCTGCCTCCCAGC 2095
consensus_15485#2      TTCAGAGCTAAGGTTAGCCTAGCNCAACCGGTGATGCGATG-CAGCATCTNCCTCC-AGC 186
                       **************  **   ** ***************** ******** ***** ***

consensus_15485#0      TCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAG 2155
consensus_15485#1      TCTCCTTGGCAGGAAGGTTTCGCTTTGCTCCCAGTTTTGAGTAGACAGAAGCAAGTTCAG 2155
consensus_15485#2      TCTCCTTNNC-GGAAGGTTTNTTTNT----CCAGTTTATAGAG----------------- 224
                       *******  * *********   * *    *******  **                   

consensus_15485#0      TTCAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAA 2215
consensus_15485#1      TTCAGGCTTCGATAAAACGCTGGAACTATGCAAATTGTAGCCGTGTTGCCTAGCCTGGAA 2215
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      CACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGG 2275
consensus_15485#1      CACCCTTGTTTTACCTGTAATGTGTAGCAGCCTCTGCTGATCAGCTCATGTGCTATATGG 2275
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      AATTCTGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGTGGCATCCTTTACAATCTCCG 2335
consensus_15485#1      AATTCTGAAGTGAAACCATAGTTAAAAGGGATCGGTTAGTGGAAAAAAAAAAAAGAAAAA 2335
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      AGATGTGCTATATGGAATTCTGCATTGATATGTTCTTTTTTAAAAAGTGAGTAAAATGGG 2395
consensus_15485#1      AAAAAAAAA--------------------------------------------------- 2344
consensus_15485#2      ------------------------------------------------------------
                                                                                   

consensus_15485#0      ATATGCTGAATGATGGCGAATTGGCGAGGATCAAAA 2431
consensus_15485#1      ------------------------------------
consensus_15485#2      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)