cluster # 1549

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Oryza sativa
cluster # 1549 cluster # 1549 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1549#0 length = 619 sequences # 2

consensusID : consensus_1549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 619
fasta sequence

                              [GCACATGGACCTTCTGAAGGAACACGAGGGGAATAAAATGAACCCATTGTCCATGCCTGAGGTAGAATGGCATCTTATTTGGCATTAATATGACATAAAATACATACATGCCATGCCTAGAATAGAATGTGCGTGTGTGTTTGTGTGTGGATTTTCATGTTTTGATGCAATTCTAGATTAGAATATGTATTCAATAATTTAATGCTTTGGGGTTATGTTGTCATATCAGCAGGCAAAACTGGTAAAATATTCAGACGCTTAACATAACATCTGTTGCTCCCCAATGGGAACTAAATCATATCTGTCAGCCATGTTTAGTTACTTGATTCTTCAAAAATAAAAAGTAAATGATAGTTGGTTCACAAATACCTGGATCTATCTAGAACAAACGGAAGACAAATCAGTCCGATTTAAAGGAATATGTGATGGAGTTCAAATGGTCACTAAAGTTGTGCTGCATGCACATTTTGCACTGTAAAAAGGTGGCATCTGCTGACAGCAGCAAATAAGTAGAGAAATCAAGTTTCTAATATTCTTTGATAGTCCCTCTGGTCATAAGTATTTGACAGTTAGGACAAGATTTGGTCAAATTTTAAAATTTTGACCATCAACAATTTCA]

[+] EMBL CF306690             [GCACATGGACCTTCTGAAGGAACACGAGGGGAATAAAATGAACCCATTGTCCATGCCTGAGGTAGAATGGCATCTTATTTGGCATTAATATGACATAAAATACATACATGCCATGCCTAGAATAGAATGTGCGTGTGTGTTTGTGTGTGGATTTTCATGTTTTGATGCAATTCTAGATTAGAATATGTATTCAATAATTTAATGCTTTGGGGTTATGTTGTCATATCAGCAGGCAAAACTGGTAAAATATTCAGACGCTTAACATAACATCTGTTGCTCCCCAATGGGAACTAAATCATATCTGTCAGCCATGTTTAGTTACTTGATTCTTCAAAAATAAAAAGTAAATGATAGTTGGTTCACAAATACCTGGATCTATCTAGAACAAACGGAAGACAAATCAGTCCGATTTAAAGGAATATGTGATGGAGTTCAAATGGTCACTAAAGTTGTGCTGCATGCACATTTTGCACTGTAAAAAGGTGGCATCTGCTGACAGCAGCAAATAAGTAGAGAAATCAAGTTTCTAATATTCTTTGATAGTCCCTCTGGTCATAAG                                                            ]
[+] EMBL CF306700             [                            GGGAATAAAATGAACCCATTGTCCATGCCTGAGGTAGAATGGCATCTTATTTGGCATTAATATGACATAAAATACATACATGCCATGCCTAGAATAGAATGTGCGTGTGTGTTTGTGTGTGGATTTTCATGTTTTGATGCAATTCTAGATTAGAATATGTATTCAATAATTTAATGCTTTGGGGTTATGTTGTCATATCAGCAGGCAAAACTGGTAAAATATTCAGACGCTTAACATAACATCTGTTGCTCCCCAATGGGAACTAAATCATATCTGTCAGCCATGTTTAGTTACTTGATTCTTCAAAAATAAAAAGTAAATGATAGTTGGTTCACAAATACCTGGATCTATCTAGAACAAACGGAAGACAAATCAGTCCGATTTAAAGGAATATGTGATGGAGTTCAAATGGTCACTAAAGTTGTGCTGCATGCACATTTTGCACTGTAAAAAGGTGGCATCTGCTGACAGCAGCAAATAAGTAGAGAAATCAAGTTTCTAATATTCTTTGATAGTCCCTCTGGTCATAAGTATTTGACAGTTAGGACAAGATTTGGTCAAATTTTAAAATTTTGACCATCAACAATTTCA]




>consensus_1549#0
GCACATGGACCTTCTGAAGGAACACGAGGGGAATAAAATGAACCCATTGTCCATGCCTGA
GGTAGAATGGCATCTTATTTGGCATTAATATGACATAAAATACATACATGCCATGCCTAG
AATAGAATGTGCGTGTGTGTTTGTGTGTGGATTTTCATGTTTTGATGCAATTCTAGATTA
GAATATGTATTCAATAATTTAATGCTTTGGGGTTATGTTGTCATATCAGCAGGCAAAACT
GGTAAAATATTCAGACGCTTAACATAACATCTGTTGCTCCCCAATGGGAACTAAATCATA
TCTGTCAGCCATGTTTAGTTACTTGATTCTTCAAAAATAAAAAGTAAATGATAGTTGGTT
CACAAATACCTGGATCTATCTAGAACAAACGGAAGACAAATCAGTCCGATTTAAAGGAAT
ATGTGATGGAGTTCAAATGGTCACTAAAGTTGTGCTGCATGCACATTTTGCACTGTAAAA
AGGTGGCATCTGCTGACAGCAGCAAATAAGTAGAGAAATCAAGTTTCTAATATTCTTTGA
TAGTCCCTCTGGTCATAAGTATTTGACAGTTAGGACAAGATTTGGTCAAATTTTAAAATT
TTGACCATCAACAATTTCA

clustalw multiple alignements is not computed in this case