These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15495#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1977 fasta sequence [CTCTGTACCTCCACCTGTGCCGCCCGTTCGCAGCAACGCGNCGGGGCACAGAGAATCTCCGCGTCCCTGGACACCACATCGAATCAACCGTCGCCTTCAACGGTTTCGCTCCCACGCAATAAAATCCCCCCTTCCCCCGTGCTCCTTTCCCCCCAATTGCTTCCCTCTTATCTCTCGATTGATCCACGAACAGTGACACCGCCGCGCAC-AGCGAATCCGCCAT-GGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGCTCCACCTCGTCGAC-CCCGACCGCAGCAT-GGACCTCGGTGCCGGCACGCTCTCCGTCGTCCGCCTCCGCCAGGGGGACCACTCCGTCGCCGTCCTCGCGAGGCTCGTCCCGGAGAAGCGCAGCCAGCGCCGCGGCGGCCTCTTCGGCTTCTTGAGCGGCGGCGGGAAGGCCGGCGACGGCGCCGCGCAGGAGCCCGTCCAGTGGCCGCTCACCCGCGACGTCGCCGCCGTCAAGCTCGACACCGCGCACTACTTCTTCTCGCTCCACGTCCCGCACACAGATCACGAGGATGACGACGCCGAGGGGGCCGAGGCGGAGAAGGACGCGGACGGGGAGGCGGCGCTGAGCTACGGGCTCACGGTCGCCAGCAAGGGGCAGGAGGCGGTCTTGGCCCAGCTGGACAAGGTACTGGAGGAGTACACCACCTTCTCCGTGAAGCAAGTGGAGCCGGCGGCGAAGGAGAAGTCGGAGGTGATGGACACGAAGGCGGTGACGGAGATCACGCCGGAGGAGGCCGTTGGGGACAAGAAGGAGGTGGTGGAGGAGCAATCAGCGGCGTTCTGGACGACGATCGCGCCGAACGTGGACGACTACAGCTCGTCGGTGGCGAGGCTGATCGCGCGGGGCTCGGGGCAGCTGGTGAGGGGCATCATCTGGTGCGGGGACATCACAGCGGAGGGCCTCCGGTGTGGGGAGGCGGTGGTGAAGAAGAGCGTGGGGCCGAGTGGGAAGCCGTCACAGGTGAAGCCGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGT-CCAA-CAGGGTAGC-AAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATGCTGTAG-AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA-CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT-GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT-GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT-GATGCACAGTGATCTCACGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU032510 [CTCTGTACCTCCACCTGTGCCGCCCGTTCGCAGCAACGCGNCGGGGCACAGAGAATCTCCGCGTCCCTGGACACCACATCGAATCAACCGTCGCCTTCAACGGTTTCGCTCCCACGCAATAAAATCCCCCCTTCCCCCGTGCTCCTTTCCCCCCAATTGCTTCCCTCTTATCTCTCGATTGATCCACGAACAGTGACACCGCCGCGCACAAGGGAATCCGCCAT GGCCGCCAAGCAGAGCCTCTACNCCGAGGTGAACCAGTCCCANCCCGACCTt ] [+] EMBL AK111568 [ CCCTCTTATCTCTCGATTGATCCACGAACAGTGACACCGCCGCGCAC AGCGAATCCGCCAT GGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGCTCCACCTCGTCGAC CCCGACCGCAGCAT GGACCTCGGTGCCGGCACGCTCTCCGTCGTCCGCCTCCGCCAGGGGGACCACTCCGTCGCCGTCCTCGCGAGGCTCGTCCCGGAGAAGCGCAGCCAGCGCCGCGGCGGCCTCTTCGGCTTCTTGAGCGGCGGCGGGAAGGCCGGCGACGGCGCCGCGCAGGAGCCCGTCCAGTGGCCGCTCACCCGCGACGTCGCCGCCGTCAAGCTCGACACCGCGCACTACTTCTTCTCGCTCCACGTCCCGCACACAGATCACGAGGATGACGACGCCGAGGGGGCCGAGGCGGAGAAGGACGCGGACGGGGAGGCGGCGCTGAGCTACGGGCTCACGGTCGCCAGCAAGGGGCAGGAGGCGGTCTTGGCCCAGCTGGACAAGGTACTGGAGGAGTACACCACCTTCTCCGTGAAGCAAGTGGAGCCGGCGGCGAAGGAGAAGTCGGAGGTGATGGACACGAAGGCGGTGACGGAGATCACGCCGGAGGAGGCCGTTGGGGACAAGAAGGAGGTGGTGGAGGAGCAATCAGCGGCGTTCTGGACGACGATCGCGCCGAACGTGGACGACTACAGCTCGTCGGTGGCGAGGCTGATCGCGCGGGGCTCGGGGCAGCTGGTGAGGGGCATCATCTGGTGCGGGGACATCACAGCGGAGGGCCTCCGGTGTGGGGAGGCGGTGGTGAAGAAGAGCGTGGGGCCGAGTGGGAAGCCGTCACAGGTGAAGCCGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGT CCAA CAGGGTAGC AAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATGCTGTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGGTCTCAC ] [+] EMBL AK098994 [ CCCTCTTATCTCTCGATTGATCCACGAACAGTGACACCGCCGCGCAC AGCGAATCCGCCAT GGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGCTCCACCTCGTCGAC CCCGACCGCAGCAT GGACCTCGGTGCCGGCACGCTCTCCGTCGTCCGCCTCCGCCAGGGGGACCACTCCGTCGCCGTCCTCGCGAGGCTCGTCCCGGAGAAGCGCAGCCAGCGCCGCGGCGGCCTCTTCGGCTTCTTGAGCGGCGGCGGGAAGGCCGGCGACGGCGCCGCGCAGGAGCCCGTCCAGTGGCCGCTCACCCGCGACGTCGCCGCCGTCAAGCTCGACACCGCGCACTACTTCTTCTCGCTCCACGTCCCGCACACAGATCACGAGGATGACGACGCCGAGGGGGCCGAGGCGGAGAAGGACGCGGACGGGGAGGCGGCGCTGAGCTACGGGCTCACGGTCGCCAGCAAGGGGCAGGAGGCGGTCTTGGCCCAGCTGGACAAGGTACTGGAGGAGTACACCACCTTCTCCGTGAAGCAAGTGGAGCCGGCGGCGAAGGAGAAGTCGGAGGTGATGGACACGAAGGCGGTGACGGAGATCACGCCGGAGGAGGCCGTTGGGGACAAGAAGGAGGTGGTGGAGGAGCAATCAGCGGCGTTCTGGACGACGATCGCGCCGAACGTGGACGACTACAGCTCGTCGGTGGCGAGGCTGATCGCGCGGGGCTCGGGGCAGCTGGTGAGGGGCATCATCTGGTGCGGGGACATCACAGCGGAGGGCCTCCGGTGTGGGGAGGCGGTGGTGAAGAAGAGCGTGGGGCCGAGTGGGAAGCCGTCACAGGTGAAGCCGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGT CCAA CAGGGTAGC AAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATGCTGTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATG ] [+] EMBL CB649283 [ CTCGATTGATCCACGAACAGTGACACCGCCGCGCAC AGCGAATCCGCCAT GGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGCTCCACCTCGTCGAC CCCGACCGCAGCAT GGACCTCGGTGCCGGCACGCTCTCCGTCGTCCGCCTCCGCCAGGGGGACCACTCCGTCGCCGTCCTCGCGAGGCTCGTCCCGGAGAAGCGCAGCCAGCGCCGCGGCGGCCTCTTCGGCTTCTTGAGCGGCGGCGGGAAGGCCGGCGACGGCGCCGCGCAGGAGCCCGTCCAGTGGCCGCTCACCCGCGACGTCGCCGCCGTCAAGCTCGACACCGCGCACTACTTCTTCTCGCTCCACGTCCCGCACACAGATCACGAGGATGACGACGCCGAGGGGGCCGAGGCGGAGAAGGACGCGGACGGGGAGGCGGCGCTGAGCTACGGGCTCACGGTCGCCAGCAAGGGGCAGGAGGCGGTCTTGGCCCAGCTGGACAAGGTACTGGAGGAGTACACCACCTTCTCCGTGAAGCAAGTGGAGCCGGCGGCGAAGGAGAAGTCGGAGGTGATGGACACGAAGGCGGTGACGGAGATCACGCCGGAGGAGG ] [+] EMBL C25993 [ ATTGATCCACGAACAGTGACACCGCCGCGCAC AG GAATCCGCCAT GGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTNGCGGTTCCGGGCGCGCAG TCCACCTCGTCGAC CCCGACCGCAGCAT GGACC ] [+] EMBL AU065167 [ ATTGATCCACGAACAGTGACACCGCCGCGCAC AG GAATCCGCCAT GGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACNCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACNCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACNTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGTTCCACNTCGTCGACNACCGACCGCAGCATGGGACCTCGGTGCCGGCACGTTNTCCGTCGTCCGCTTCCGCaa ] [+] EMBL CB639395 [ ACGAACAGTGACACCGCCGCGCAC AGCGAATCCGCCATGGGCCGCCAAGCAGAGCCTCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCAACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGCTCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCGAGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGCTCCACCTCGTCGAC CCCGACCGCAGCAT GGACCTCGGTGCCGGCACGCTCTCCGTCGTCCGCCTCCGCCAGGGGGACCACTCCGTCGCCGTCCTCGCGAG ] [+] EMBL CA753163 [ TCTGGTGCGGGGAC TCACAGCGGAGGGCC CCCGTGTGGGGAGGCGGTGGTGAAGAAGAGCGTGGGGCCGAGTGGGAAGCCGTCACAGGTGAAGCCGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGT CCAA CAGGGTAGC AAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCCGGGCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATGCTGTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTT AAAATTCGGAAAGCTCTCGACCCAAA GGC ATCTG AGAAGT GTCTC ] [-] EMBL CB663354 [ TGAAGAAGAGCGTGGGGCCGAGTGGGAAGCCGTCACAGGTGAAGCCGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGT CCAA CAGGGTAGC AAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATGCTGTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGATCTCACGGTTTA ] [-] EMBL CB649284 [ CCGAGTGGGAAGCCGTCACAGGTGAAGCCGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGT CCAA CAGGGTAGC AAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATGCTGTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGATCTCCCGG ] [+] EMBL AU092224 [ GATGTCCCAACCAGGTTAGCAAAATTNATCCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTNCCAGCACTGTNCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGNCGAAGTTATTCTTGCTTCACTCGATGGATTTGGGAAAGTATGGGATNCTGTAG AGGTGTCTGGAAAGAACNTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTNCCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGAaaaaa ] [+] EMBL BI806993 [ AATTAT GGATCCTTTAG A GT TCTGGAAAGAACGTGATGCGAACNTCGTC GTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACA GTCACACCAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGATTCGCATGGGCTGGTCTTCAAAATTCGGAAAGCTCTCGACCCCAAGGGCCATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCCAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTTNCCTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTCCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACATGGATGCACAGTGATCTCCCGGTTTAtttgaaa ] [+] EMBL AK104874 [ ATGGGATGCTGTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGAT ] [+] EMBL CF309545 [ gaGTAGAAAGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGATCTCACGGTTTAAAAAAAAA ] [+] EMBL AU091412 [ GTAG AGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACNCNTAGATNCGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTATTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACNGTGATCTCACGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAA ] [-] EMBL CF309544 [ AAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACA CAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGATCTCACGGTTTAAAAAAAAAA ] [+] EMBL CA999737 [ TCTGGAAACGCTCTTGGAGTCGCATGGGCT GTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGC ] [+] EMBL BI810136 [ TGTGAACTT GCGGC TACCAGATTTT GTTGGATGTGTCGCCTGTAACTTGTAAGGCGTGTGACTGTT CCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCCCA ] [+] EMBL CF315147 [ TGAACTTGGCGGCTATAGCAGATTTT GTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACAT GATGCACAGTGATCTCACGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15495#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 708 fasta sequence [CAGGACTTCTTGCACNAGCAAATTCAATCCTCNCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCNATGGATTTGGGAAAGTATGGGATGCTGTANANGTGTCTGGAAAGAACGTGATGCGAACGTCGTCNGTTGTGACAACTTCTGTTGTNACACATANATACGGAGATCAAGCTGGACAGGTCACACAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCNCATGGGCTGTCTTCAAAATTCGGAAAGCTCTCGACCCAAANGGCAATCTGAAGAAATCGTCTCTGGCGANCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAAGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCANATTTT-GTTGGATGTGTCNCTTGTAACTTGTAANGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACATGATGCACAGTGATCTCACGGTTTATTTGTTTTTAAAAAAA] [+] EMBL BE228385 [CAGGACTTCTTGCACNAGCAAATTCAATCCTCNCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGAACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCACTCNATGGATTTGGGAAAGTATGGGATGCTGTANANGTGTCTGGAAAGAACGTGATGCGAACGTCGTCNGTTGTGACAACTTCTGTTGTNACACATANATACGGAGATCAAGCTGGACAGGTCACACAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCNCATGGGCTGTCTTCAAAATTCGGAAAGCTCTCGACCCAAANGGCAATCTGAAGAAATCGTCTCTGGCGANCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAAGAAGTGAGACAACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGCTATAGCANATTTT GTTGGATGTGTCNCTTGTAACTTGTAANGCGTGTGACTGTTGCCG ] [+] EMBL BM421854 [ aaTATGGGAT CTGTAGAGGTGTCTGGAAAGAACGTGATGCGAACGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGGTCACACAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCTGTCTTCAAAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTGCTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGAC ACACGGTCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTCTTTTGTGAACTTGGCGGC TAGCAGATTTTCNTTGGATGTGTCGCTTGTAACTTGTAAGGCGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACATGATGCACAGTGATCTCACGGTTTATTTGTTTTTAAAAAAA] [+] EMBL AU032511 [ TGGTTTTGATGTTTGTTTTGGTTTNTGGATGTTTGCGAATTGCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACATGATGCACAGTGATCTCACGGTTTATTTGTTTTTAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15495#0 CTCTGTACCTCCACCTGTGCCGCCCGTTCGCAGCAACGCGNCGGGGCACAGAGAATCTCC 60 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 GCGTCCCTGGACACCACATCGAATCAACCGTCGCCTTCAACGGTTTCGCTCCCACGCAAT 120 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 AAAATCCCCCCTTCCCCCGTGCTCCTTTCCCCCCAATTGCTTCCCTCTTATCTCTCGATT 180 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 GATCCACGAACAGTGACACCGCCGCGCACAGCGAATCCGCCATGGCCGCCAAGCAGAGCC 240 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TCTACCCCGAGGTGAACCAGTCCCACCCCGACCTCAACACCGCCTTCCTCGCCAACCCCA 300 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 ACCGCGCCGCCACTGCCAGCCCTGGCGGCTCGCTCTACCCCTCCGTCGACCCGCAGCAGC 360 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TCGCCGAGAACCTCTTCCCCGACGCCGCCGATGACGCCGCGCCGCCGCCTCCCACCACCG 420 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 AGGAGGCCCTCGTCGCGGTTCCGGGCGCGCAGCTCCACCTCGTCGACCCCGACCGCAGCA 480 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TGGACCTCGGTGCCGGCACGCTCTCCGTCGTCCGCCTCCGCCAGGGGGACCACTCCGTCG 540 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 CCGTCCTCGCGAGGCTCGTCCCGGAGAAGCGCAGCCAGCGCCGCGGCGGCCTCTTCGGCT 600 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TCTTGAGCGGCGGCGGGAAGGCCGGCGACGGCGCCGCGCAGGAGCCCGTCCAGTGGCCGC 660 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TCACCCGCGACGTCGCCGCCGTCAAGCTCGACACCGCGCACTACTTCTTCTCGCTCCACG 720 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TCCCGCACACAGATCACGAGGATGACGACGCCGAGGGGGCCGAGGCGGAGAAGGACGCGG 780 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 ACGGGGAGGCGGCGCTGAGCTACGGGCTCACGGTCGCCAGCAAGGGGCAGGAGGCGGTCT 840 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 TGGCCCAGCTGGACAAGGTACTGGAGGAGTACACCACCTTCTCCGTGAAGCAAGTGGAGC 900 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 CGGCGGCGAAGGAGAAGTCGGAGGTGATGGACACGAAGGCGGTGACGGAGATCACGCCGG 960 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 AGGAGGCCGTTGGGGACAAGAAGGAGGTGGTGGAGGAGCAATCAGCGGCGTTCTGGACGA 1020 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 CGATCGCGCCGAACGTGGACGACTACAGCTCGTCGGTGGCGAGGCTGATCGCGCGGGGCT 1080 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 CGGGGCAGCTGGTGAGGGGCATCATCTGGTGCGGGGACATCACAGCGGAGGGCCTCCGGT 1140 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 GTGGGGAGGCGGTGGTGAAGAAGAGCGTGGGGCCGAGTGGGAAGCCGTCACAGGTGAAGC 1200 consensus_15495#1 ------------------------------------------------------------ consensus_15495#0 CGAGCACTATCAGGAGGATGAAGAGGGCTAGAAGGGTTACGAAGATGTCCAACAGGGTAG 1260 consensus_15495#1 ----------------------------------------CAGGACTTCTTGCAC--NAG 18 * ** ** ** ** consensus_15495#0 CAAATTCAATCCTCTCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGA 1320 consensus_15495#1 CAAATTCAATCCTCNCTGGTGTTCTAAAGGTCTCTGGGTTTGTTACCAGCACTGTGCTGA 78 ************** ********************************************* consensus_15495#0 ACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCAC 1380 consensus_15495#1 ACTCGAAACCTGCCCAGAAATTCTTTAAGTTGATGCTGGGCGAAGTTATTCTTGCTTCAC 138 ************************************************************ consensus_15495#0 TCGATGGATTTGGGAAAGTATGGGATGCTGTAGAGGTGTCTGGAAAGAACGTGATGCGAA 1440 consensus_15495#1 TCNATGGATTTGGGAAAGTATGGGATGCTGTANANGTGTCTGGAAAGAACGTGATGCGAA 198 ** ***************************** * ************************* consensus_15495#0 CGTCGTCGGTTGTGACAACTTCTGTTGTAACACATAGATACGGAGATCAAGCTGGACAGG 1500 consensus_15495#1 CGTCGTCNGTTGTGACAACTTCTGTTGTNACACATANATACGGAGATCAAGCTGGACAGG 258 ******* ******************** ******* *********************** consensus_15495#0 TCACACAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCGCATGGGCTGTCTTCA 1560 consensus_15495#1 TCACACAGGATTACCTTCACGCCTCTGGAAACGCTCTTGGAGTCNCATGGGCTGTCTTCA 318 ******************************************** *************** consensus_15495#0 AAATTCGGAAAGCTCTCGACCCAAAGGGCAATCTGAAGAAGTCGTCTCTGGCGAGCGCTG 1620 consensus_15495#1 AAATTCGGAAAGCTCTCGACCCAAANGGCAATCTGAAGAAATCGTCTCTGGCGANCGCTG 378 ************************* ************** ************* ***** consensus_15495#0 CTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAGGAAGTGAGACAACACGG 1680 consensus_15495#1 CTGCCCATGCTGTAGCTAAAGAATCGATATCTCGGCAAAGAAAGAAGTGAGACAACACGG 438 ****************************************** ***************** consensus_15495#0 TCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTC 1740 consensus_15495#1 TCGATGGTGGAACTCGCTGTTACTCTCTAATACGGTGTACTAGCTTCAATAGAAATGCTC 498 ************************************************************ consensus_15495#0 TTTTGTGAACTTGGCGGCTATAGCAGATTTTGTTGGATGTGTCGCTTGTAACTTGTAAGG 1800 consensus_15495#1 TTTTGTGAACTTGGCGGCTATAGCANATTTTGTTGGATGTGTCNCTTGTAACTTGTAANG 558 ************************* ***************** ************** * consensus_15495#0 CGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATT 1860 consensus_15495#1 CGTGTGACTGTTGCCGTGATGGTTTTGATGTTTGTTTTGGTTTTTGGATGTTTGCGAATT 618 ************************************************************ consensus_15495#0 GCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACATGATGCACAGT 1920 consensus_15495#1 GCGATGATGTACTGATTTGTAACCTGTCGAATTACTATATGTGTATACATGATGCACAGT 678 ************************************************************ consensus_15495#0 GATCTCACGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1977 consensus_15495#1 GATCTCACGGTTTATTTGTTTTTAAAAAAA--------------------------- 708 ************** ******* |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||