Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 15557 cluster # 15557       Sequences # 23       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15557#0 length = 1764 sequences # 18  
consensus_15557#1 length = 861 sequences # 1  
consensus_15557#2 length = 786 sequences # 4  

consensusID : consensus_15557#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1764
fasta sequence
                              [TCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG-AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTCTAAACTAAGGAGGGAAATAATGAGGACACCCCATATA]

[+] EMBL CB651682             [TCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB657182             [ CACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AB114856             [   CTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAAGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATG                                                                                  ]
[+] EMBL CB619492             [                                    ATCGCCCCCTTACAACTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGAGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGACTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGAGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAG CAGAAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB658297             [                                                                                                                      CCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB965340             [                                                                                                                                   CCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGCGCGCCCGGGAGGACTTCAGGGAGCTCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAACATTCCAATGAAATATGGACGCAG TGATGTCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB618854             [                                                                                                                                                                    CCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTACGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB622639             [                                                                                                                                                                                                                                                                                       TCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTANAGACTACGCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB618047             [                                                                                                                                                                                                                                                                                                gaGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGNAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB663957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTNCAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK100016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACG AGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTCTAAACTAAGGAGGGAAATAATG               ]
[+] EMBL CF326604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAA                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB657183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGA                                                                                                             ]
[-] EMBL CB619493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCAGCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTTCCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGATGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGGGAAATATTTGTCGGAGAGAAA                                                                                                         ]
[-] EMBL CB651683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATT                                                                                                ]
[-] EMBL CB622640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCAGCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTTCCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGATGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTC                                     ]
[+] EMBL AK058244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACGACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTCTAAA                                 ]
[-] EMBL CB620140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCAGCACCACCTCCACCAGTNGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTTCCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGTGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAACCCTTTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGCCCTCCTCTGATGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTCTAAACTAAGGAGGGAAATAATGAGGACACCCCATATA]


>consensus_15557#0 TCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCT GCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCC GCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCG TCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGG GCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAG AGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTC CGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGG GGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGT CTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTAT GCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATT CCAATGAAATATGGACGAGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGG CTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATG GGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGA CCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAA CCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGAC ATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAG GATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAA GACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAG GGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCG CCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCA GTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCA GCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCG GACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAG CCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTG ACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGA GTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCC GTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTC TTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCA TGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTCTAAACTAAGGAGG GAAATAATGAGGACACCCCATATA



consensusID : consensus_15557#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 861
fasta sequence
                              [AAAAAGACCAGAAGAAAAAACTCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACGAGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCCAGGATCTCTAGTGCTACCCACAGA]

[+] EMBL CB623077             [AAAAAGACCAGAAGAAAAAACTCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACGAGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCCAGGATCTCTAGTGCTACCCACAGA]


>consensus_15557#1 AAAAAGACCAGAAGAAAAAACTCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATC GCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGC CCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGC GGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGA GATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGG CACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAG ATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTAT CCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAG TGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACGAGTTGA TGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGT GCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGT TGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAA GCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGT TGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCCAGG ATCTCTAGTGCTACCCACAGA



consensusID : consensus_15557#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 786
fasta sequence
                              [TTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTNGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGG-AGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGCCATTC----AAAAAAAAAAAAAGA]

[-] EMBL CB656179             [TTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTNGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGG AGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGCCATTC    AAAAAAAAAAAAAGA]
[-] EMBL CB618855             [                                                                                                                       ACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCTTGAACCAGCACCAGCGCCAGCAGCAGCAGCACCACCTCCACCAGTGGAGGAGAAGAAAGAAGCTGAACCAACTCCAGTTCCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGG AGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGATGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTGAACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAGTTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGACATTCTCTAAAAAAAAAAAAAAGA]
[+] EMBL AW070101             [                                                                                                                                                                                                                                                                CGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACctcggc                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AA753075             [                                                                                                                                                                                                                                                                                                                                                                                                                   acTTCGGCACG AGCCCGGACTAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGANTGTTTTGAATTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAAGATGGGCATGTGAATGGATTCCANTACTTTCTGAACTTCTTGAGTAATTCCTCTANANAAATATTTGTCGGANANAAATGTCACATTATCTANTTGTCATG                                                              ]


>consensus_15557#2 TTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTC TTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCA CCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCA CCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTNGAGGAGAAGAAGGAAGCTGAACCA ACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAAC GGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAG CTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCG GACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCC TTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTG TTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGT TATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTG AACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAG TTGTCATGGCTCATGACTACATTCTCTATACTGAGGGAAATTATGCCATTCAAAAAAAAA AAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15557#0      TCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCT 60
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCC 120
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCG 180
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      TCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGG 240
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAG 300
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      AGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTC 360
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      CGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGG 420
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGT 480
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      CTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTAT 540
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATT 600
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      CCAATGAAATATGGACGAGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGG 660
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      CTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATG 720
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGA 780
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      CCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAA 840
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      CCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGAC 900
consensus_15557#2      ------------------------------------------------------------
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      ATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAG 960
consensus_15557#2      ------------------------------------------------------TTTGAG 6
consensus_15557#1      ------------------------------------------------------------
                                                                                   

consensus_15557#0      GATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAA- 1019
consensus_15557#2      GATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTCTTTAA- 65
consensus_15557#1      ----------AAAAAGACCAGAAGAAAAAACTCACTCGACTCGAGCGCGCGCGCCATGGC 50
                                   ** *   *     *****    *        **   **   *  *   

consensus_15557#0      AGACTACGCTGAAGCTCATG----CTAAACTGAGCGACCTTGG--TGCAAAGTTCGATCC 1073
consensus_15557#2      AGACTACGCTGAAGCTCATG----CTAAACTGAGCGACCTTGG--TGCAAAGTTCGATCC 119
consensus_15557#1      GGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCC 110
                        **   *   *  **         *    ***     ** * *  ***   ** *  ***

consensus_15557#0      ACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGA-AGGATCCTGAACCAG 1132
consensus_15557#2      ACCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGA-AGGATCCTGAACCAG 178
consensus_15557#1      CCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAG 170
                        **   * *        *   **  *   * **** *        * * * **  *****

consensus_15557#0      CACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAAC 1192
consensus_15557#2      CACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTNGAGGAGAAGAAGGAAGCTGAAC 238
consensus_15557#1      CGCCGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGC--CCGGGA 228
                       * ** *** * ** ** *   *  *  *     * *   **   ****  *   * *   

consensus_15557#0      CAACTCCAGT---ACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACA 1249
consensus_15557#2      CAACTCCAGT---ACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACA 295
consensus_15557#1      GGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTG 288
                         **  ***    * *   **    *    * **     ****** * * *     *   

consensus_15557#0      ACAACGGTGCAGCAC-CGCAACCAGAGCCCT------TCGTCGCTGCGAAATACTCCTAC 1302
consensus_15557#2      ACAACGGTGCAGCAC-CGCAACCAGAGCCCT------TCGTCGCTGCGAAATACTCCTAC 348
consensus_15557#1      GCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGA 348
                        **    *   ****   * ** *** *         * * *** * *        *   

consensus_15557#0      GGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGA-TCAGGGCGGAGT--ACGAGGGA 1359
consensus_15557#2      GGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGA-TCAGGGCGGAGT--ACGAGGGA 405
consensus_15557#1      CGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGC 408
                        *  **   *** * *    *   **  ***    **  **  ** *     *  *  * 

consensus_15557#0      TTCGGAGGCAGCCCGGACAAGCCTCTGCAG---TCCAACTACTTCCTCAACATCATGCTC 1416
consensus_15557#2      TTCGGAGGCAGCCCGGACAAGCCTCTGCAG---TCCAACTACTTCCTCAACATCATGCTC 462
consensus_15557#1      TTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTT 468
                       ** * **     **   *** *     **     **   **   * *   *    *  * 

consensus_15557#0      TTGATCGG--AGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCT- 1473
consensus_15557#2      TTGATCGG--AGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCT- 519
consensus_15557#1      CCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATA 528
                           * **  ** ***       **** *   *** * **  *   *   * ***   * 

consensus_15557#0      --GATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTT 1531
consensus_15557#2      --GATGACCTCCTCTGACGAGTGTTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTT 577
consensus_15557#1      TGGACGAGTTGATGTCACAGCAGCTGAGCAGTGC-CCACCAGAGGGGAGGCTTCCTGATG 587
                         ** **  *  * * **    * *  *   **  *  ** * *   **  ** *   * 

consensus_15557#0      TCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATG 1591
consensus_15557#2      TCTCTTTCCATGTTTTGAGTCGTTATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATG 637
consensus_15557#1      CCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATG 647
                        *  *   * ***      *  * **       *   ***       * **      ***

consensus_15557#0      TGAATGGA-TTCCAGTACTTTCTGAACTTC------TTGAGTAATTC---CTCTAGAGAA 1641
consensus_15557#2      TGAATGGA-TTCCAGTACTTTCTGAACTTC------TTGAGTAATTC---CTCTAGAGAA 687
consensus_15557#1      ACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGA 707
                         ** * * **   * * * **** *   *      ***    **     *   * ** *

consensus_15557#0      ATATTTGTCGGAG---AGAAATGTCACATTAT----------CTAGTTGTCATGGCTCAT 1688
consensus_15557#2      ATATTTGTCGGAG---AGAAATGTCACATTAT----------CTAGTTGTCATGGCTCAT 734
consensus_15557#1      GTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGC 767
                        *   **  * *    *****    * **  *          ** **   * ***     

consensus_15557#0      GACTACATTCTCTATACTGAGGGAAATT--ATGACATTCT----CTAAACTAAGGAGGGA 1742
consensus_15557#2      GACTACATTCTCTATACTGAGGGAAATT--ATGCCATTCA----AAAAAAAAAAAAGA-- 786
consensus_15557#1      AATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGC 827
                        *  *    *  *  * **   *** **  **  ** *          *   *  **   

consensus_15557#0      AATAATGAGGACACCCCATATA------------ 1764
consensus_15557#2      ----------------------------------
consensus_15557#1      AAAGGGACCCAGGATCTCTAGTGCTACCCACAGA 861
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)