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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15577#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1248 fasta sequence
[CCAGCAATAACATTATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC-AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG-CAA-GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG-CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCCTGCTCCGACAAGCCCGCCCTTA-TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCA-CTTTGACCTCTCCGGCCTTGCCTTCGGCGCCATGGCTAAGGATGGCAAGGACGAAGAGCTCCGTAAGGCCGGCATCATCGACACGCAGTTCCGCCGCGTCAAGTGCAAGTATCCTGCCGACACCAAGATCACCTTCCACATCGAGAAGGCCTCCAACCCCAACTACCTTGCGCTGCTAGTCAAGTACGTCGCTGGTGATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCAT-CGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCG-CGGCTGCC--TATATATATATATATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATGTTGTGTATCCTTTTCTTCAC-GTCAAATTGCACTGCGCTATTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK072792 [CCAGCAATAACATTATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAGCCAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCCTGCTCCGACAAGCCCGCCCTTA TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCA CTTTGACCTCTCCGGCCTTGCCTTCGGCGCCATGGCTAAGGATGGCAAGGACGAAGAGCTCCGTAAGGCCGGCATCATCGACACGCAGTTCCGCCGCGTCAAGTGCAAGTATCCTGCCGACACCAAGATCACCTTCCACATCGAGAAGGCCTCCAACCCCAACTACCTTGCGCTGCTAGTCAAGTACGTCGCTGGTGATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCAT CGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCG CGGCTGCC TATATATATATATATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGA ]
[+] EMBL OS31771 [ ATTATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGT CGCCGTCTCCTGCGGGCCACCCGAAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGGCCCCCAAGGACAACGGCGGCGCGTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCCTGCTCCGACAAGCCCGCCCTTA TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCA CTTTGACCTCTCCGGCCTT GCCATGGCTAAGGATGGCAAGGACGAAGAGCTCCGTAAGGCCGGCATCATCGACACGCAGTTCCGCCGCGTCAAGTGCAAGTATCCTGCCGACACCAAGATCACCTTCCACATCGAGAAGGCCTCCAACCCCAACTACCTTGCGCTGCTAGTCAAGTACGTCGCTGGTGATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGT GCGAGAAGATCATCCGCCGAGGACGCCATCCCTGAT CCTGGAAGG CGACAGCGTGTACAAGT CAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACATACGATCCGGCGCCGGCTGCCTATATATATATATATATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGC TGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGG CCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATG ]
[+] EMBL C72914 [ TTATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCG CTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTTCAAGCCGGAGGCTTGCTTCGACAAGCCCG CCTTA TCCACGTAACCGACATGAACGACGAG CCATTGTTGCCTACCA CTTTGACCTTTCCGGCCTTG CTTNGG GGCATGGNTAAGGATGG AAGGACGAg ]
[+] EMBL AU063881 [ TATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCG CTGCGGGTACAAGGA NTCCACAAGGCTCNCTTTCTCGGNATGAA ]
[+] EMBL AF261270 [ TATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAGCCAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCCTGCTCCGACAAGCCCGCCCTTA TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCA CTTTGACCTCTCCGGCCTTGCCTTCGGCGCCATGGCTAAGGATGGCAAGGACGAAGAGCTCCGTAAGGCCGGCATCATCGACACGCAGTTCCGCCGCGTCAAGTGCAAGTATCCTGCCGACACCAAGATCACCTTCCACATCGAGAAGGCCTCCAACCCCAACTACCTTGCGCTGCTAGTCAAGTACGTCGCTGGTGATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCAT CGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTWTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCG CGGCTGCC TATATATATATATATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCMCAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATGTTGTGTATCCTTTTCTTCAC GTCAAATTGCACTGCGCTATTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU063981 [ TATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGA GNCTGCTCCGACAAGCCCGCCCTTA TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCA CTTTGACCTCTCCGGCCTTGCCTTCGGCGCCATGGCTAAGGATGGCAAGGA ]
[+] EMBL C72059 [ ATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTTTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCTNGCTCCGACAAGGCCGGCCTTATTCCACGTCANCGACAT ]
[+] EMBL C98677 [ TTGCAGCAATGGCATCCTNCTCCCTTCTACTCGNCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGNCCAAGGGTGCTGG NCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGNTCCCTTNCTCGGCATGAACTNCTGCGGCAACGACCCNATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAA ]
[+] EMBL AU093947 [ CAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAGCCAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGA GNCTGCTCCGACAAGCCCGCCCTTA TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCC ]
[+] EMBL AU063925 [ CAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAANGGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCTTGCTCCGACAAGCCCGCCCTTA TNCACGTCAACGACATGAACGACGAGCCCATCGTTGCTTAACANTTTTGA CTCTNCG ]
[+] EMBL AU063919 [ CAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCTTGCTCCGACAAGCCCGCCCTTA TCCACGTCAACGACATNAACGACGAG CCATC ]
[+] EMBL C72568 [ ATGGCATCCTCCTNCNTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCNACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCG CTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCANGGGCTGCGGCTCATGC ]
[+] EMBL C72448 [ GCATCCTCCTCCCTTCTACTCGCCTGTGTTGTGGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCC AAGGTGCCACCGGGCCCCAACATCACGACAAGCTACGGCGACAAGTGGCTGGAAG CAA GGCCACCTGGTATGGTGCGCCCAAGGGTGCTGG CCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAANGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCTTGCTCCGACAANCCCG CCTTA TCCACGTCACCGACATTAACGACGAG CCATCGTTG CTA CA TTTTGA CTNTCCGG CTTG CTTTGGGGCAATGGNTAAAGATTGGAANGAC AAAAG TCCGT AGGCCGGatt ]
[+] EMBL BP184832 [ GCGGGTACAAGGATGTCGACAAGGCTCCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGCGGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCCTGCTCCGACAAGCCCGCCCTTA TCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCA CTTTGACCTCTCCGGCCTTGCCTTCGGCGCCATGGCTAAGGATGGCAAGGACGAAGAGCTCCGTAAGGCCGGCATCATCGACACGCAGTTCCGCCGCGTCAAGTGCAAGTATCCTGCCGACACCAAGATCACCTTCCACATCGAGAAGGCCTCCAACCCCAACTACCTTGCGCTGCTAGTCAAGTACGTCGCTGGTGATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCAT CGCCGAGGACGCCATTCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAA ]
[+] EMBL AU085857 [ ATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCAT CGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCG CGGCTGCC TATATATATATATATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAaaaa ]
[+] EMBL AU182348 [ CAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCG CGGCTGCC TATATATATATATATATATATATATATATATATATATTATATCCTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCANAGAAATNTTTTTTAAACGAAATAATCTATAAATTTTTGAGCTAGGATTGTGGAGCATATACACGCCAGCNCTATAATGGNGTNTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCCCAATATTTTNTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATGTTGTGTATCCTTTTNTTCACGGTCAAATTGCNCTGCGCTATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU165521 [ ATATATATAAAAATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAaaaaaaaa ]
[+] EMBL AU094057 [ ATATATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAaaaaa ]
[+] EMBL AU094107 [ TATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGANAATGGGGTNATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATGTTGTGTATCCTTTTCTTCAC GTCAAATTGCACTGCGCTATTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15577#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 516 fasta sequence
[CGTCGTGGAGTGGAAATCAAGGAGAAGGGCTCCGAGGANTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTNAAGGGCCCCTTCTCNGTCCGCGTCACCACCGAGGNTGGCGAGAAGATCATCGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCGCGGCTGCCTATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAAAAAAAAAAAAAAAAA]
[+] EMBL AU101113 [CGTCGTGGAGTGGAAATCAAGGAGAAGGGCTCCGAGGANTGGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTNAAGGGCCCCTTCTCNGTCCGCGTCACCACCGAGGNTGGCGAGAAGATCATCGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCGCGGCTGCCTATATATNNNNNNATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAAAA ]
[+] EMBL AU182422 [ CATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTCTCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCATCGCCGAGGACGCCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCGCGGCTGCCTATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAAAA ]
[+] EMBL AU093948 [ ataTATATATATATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGTGGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGACAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15577#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 122 fasta sequence
[TTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATGTTGTGTATCCTTTTCTTCACGTCAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA765959 [TTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGCGTGAGATTATCATGAGAAGCAGTAACCATGTTGTGTATCCTTTTCTTCACGTCAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15577#0 CCAGCAATAACATTATATTGCAGCAATGGCATCCTCCTCCCTTCTACTCGCCTGTGTTGT 60
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 GGTGGCGGCTATGGTGTCCGCCGTCTCCTGCGGGCCACCCAAGGTGCCACCGGGCCCCAA 120
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 CATCACGACAAGCTACGGCGACAAGTGGCTGGAAGCAAGGCCACCTGGTATGGTGCGCCC 180
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 AAGGGTGCTGGCCCCAAGGACAACGGCGGCGCCTGCGGGTACAAGGATGTCGACAAGGCT 240
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 CCCTTCCTCGGCATGAACTCCTGCGGCAACGACCCCATCTTCAAGGACGGCAAGGGCTGC 300
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 GGCTCATGCTTCGAGATCAAGTGCTCCAAGCCGGAGGCCTGCTCCGACAAGCCCGCCCTT 360
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 ATCCACGTCACCGACATGAACGACGAGCCCATCGCTGCCTACCACTTTGACCTCTCCGGC 420
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 CTTGCCTTCGGCGCCATGGCTAAGGATGGCAAGGACGAAGAGCTCCGTAAGGCCGGCATC 480
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 ATCGACACGCAGTTCCGCCGCGTCAAGTGCAAGTATCCTGCCGACACCAAGATCACCTTC 540
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 CACATCGAGAAGGCCTCCAACCCCAACTACCTTGCGCTGCTAGTCAAGTACGTCGCTGGT 600
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 GATGGTGACGTCGTGGAGGTGGAAATCAAGGAGAAGGGCTCCGAGGAGTGGAAGGCGCTC 660
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 AAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTCAAGGGCCCCTTC 720
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 ------------------------------------------------------------
consensus_15577#0 TCCGTCCGCGTCACCACCGAGGGTGGCGAGAAGATCATCGCCGAGGACGCCATCCCTGAT 780
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 --------------------CGTCGTGGAGTGGAAATCAAGGAGAAGGGCTCCGAGGANT 40
consensus_15577#0 GGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAGCATTTTAAGCA 840
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 GGAAGGCGCTCAAGGAGTCATGGGGTGCCATTTGGAGGATAGACACCCCCAAGCCGCTNA 100
consensus_15577#0 AGGAAGAAACCAGCGTACGTACGATCCGGCGCGGCTGCCTATATATATATATATATATAT 900
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 AGGGCCCCTTCTCNGTCCGCGTCACCACCGAGGNTGGCGAGAAGATCATCGCCGAGGACG 160
consensus_15577#0 ATATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACAT 960
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 CCATCCCTGATGGCTGGAAGGCCGACAGCGTGTACAAGTCCAACGTCCAGGCCAAGTGAG 220
consensus_15577#0 ATATATCCAGAGAAATATTTTTTAAACGAAATAATCTATAAATTTCTGAGCTAGGATTGT 1020
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 CATTTTAAGCAAGGAAGAAACCAGCGTACGTACGATCCGGCGCGGCTGCCTATATATATA 280
consensus_15577#0 GGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGA 1080
consensus_15577#2 ------------------------------------------------------------
consensus_15577#1 TATATATATATATATTATATACTATATATGTGTTGCTGCATGCTTGCATGCATGCACATA 340
consensus_15577#0 CAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGC 1140
consensus_15577#2 ---------------TTTTTGCCCACAATATTTTCTGCTAAATTCATTCTCTGATTTTGC 45
consensus_15577#1 TATATCCAGAGAAATATTTTTTAAACGAAATAATCTA-TAAATTTCTGAGCTAGGATTGT 399
**** ** * ** *** ****** * ** ***
consensus_15577#0 GTGAGATTATCATGAGAA-GCAGTAACCATGTTGTGTATCCTTTT-------CTTCACGT 1192
consensus_15577#2 GTGAGATTATCATGAGAA-GCAGTAACCATGTTGTGTATCCTTTT-------CTTCACGT 97
consensus_15577#1 GGAGCATATACACGCCAGCACTATAATGGCGTCTGCTCTCCCATCGAACTGGCCCTGTGA 459
* ** ** * * * *** ** * *** * * *
consensus_15577#0 CAAATTGCACTGCGCTATTTATTTAAAA-----------AAAAAAAAAAAAAAAAAAAAA 1241
consensus_15577#2 CAAA--------------------AAAA-----------AAAAAAAAAAAAAAAAA---- 122
consensus_15577#1 CAATGGGGTCATTTGTTTTTGCCCACAATATTTTCTGCTAAAAAAAAAAAAAAAAAA--- 516
*** * ** *****************
consensus_15577#0 AAAAAAA 1248
consensus_15577#2 -------
consensus_15577#1 -------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||