cluster # 1558

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Oryza sativa
cluster # 1558 cluster # 1558 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1558#0 length = 999 sequences # 2

consensusID : consensus_1558#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 999
fasta sequence

                              [GCGGATGGCTTCTAGGAGAAGGATCGACACAGTGGTGGAAGGGTGATGTGGCGCGCGTCCATAGGTTGGACGGCGGCGGCGCGGGCCCGGGTGTCGTCATCGACACAGTGGAGGGGAGGTGCGAGGCTGGCGGCGTGAACGCAGCTCACGCGGACGCTCGTCTGCGGCCGATGGAGAGCGAGGATGCAAGGCGTGGACGAGGAGTAGCGACGCTCACGCGGGCGACGTCCTGGGAGGCGGCGAAGTGACCATCGGTCACAAGGCTTCCCCGAAGCACGTGTCGGCGGCGGATGGGATGGACGGCGATAATGTGGGCCCCGAGTGTCGACATCGCTACAGGAAGGAGGCTTACAAGATAAGCTTCGCTGTGAACTAGCTCTCCAATTCGGTGTGGACTCAGTTTTCTCGTTCGGTGTGAACCACTCACACTGTGTTCTTGGTGTTTGGGGAAGAGATTTGGGAGGTGCTTGGTGGGCTAAGAGCACGGTGCAGGAGGGAGGCCGTCGTGCGGGGCCCTCGGCTTGAAGGCCGTCATCCACCCACGGCTGGGTTGGTAGGGGCACGGTCAGTGCACGGCGCGGCACTGAGCGCGGTGCGGTGCGGCTCGGTGCAGGAGCGCGGTGCGGCGCACGCAAGGAGGAGCGGCGCGGCACGGCACGGTGGCTCGGTGACCCGGTGCGCCAGCCTCGCCCGACTCGGCATTTTGCCGAGCACGTGGCGGGCGGCGTGTCAGCCTGCTGGCTGAGGCAAGGAAGGAGGGGGAGTAGACTTGGCTGCAAGAGAGAGGGAGAGCTGGTGAGGGAGCAAAGACATACTTGTGCTGGGGGGTGAGTTGGGCTGGCTGGAAAAGAAGGCCCAACAGAATGGGGACTCTCTGTATTTGTAA-GG-ATTGGAATTGGGAAGAATTTTGTATTTGGAATTTGTAGATGAACTGTATATTGGTAACTGGACTGAGAATTTGTAATAGGACTATATAATTGGACATTTGATTTGGCTCTG]

[+] EMBL AK062975             [GCGGATGGCTTCTAGGAGAAGGATCGACACAGTGGTGGAAGGGTGATGTGGCGCGCGTCCATAGGTTGGACGGCGGCGGCGCGGGCCCGGGTGTCGTCATCGACACAGTGGAGGGGAGGTGCGAGGCTGGCGGCGTGAACGCAGCTCACGCGGACGCTCGTCTGCGGCCGATGGAGAGCGAGGATGCAAGGCGTGGACGAGGAGTAGCGACGCTCACGCGGGCGACGTCCTGGGAGGCGGCGAAGTGACCATCGGTCACAAGGCTTCCCCGAAGCACGTGTCGGCGGCGGATGGGATGGACGGCGATAATGTGGGCCCCGAGTGTCGACATCGCTACAGGAAGGAGGCTTACAAGATAAGCTTCGCTGTGAACTAGCTCTCCAATTCGGTGTGGACTCAGTTTTCTCGTTCGGTGTGAACCACTCACACTGTGTTCTTGGTGTTTGGGGAAGAGATTTGGGAGGTGCTTGGTGGGCTAAGAGCACGGTGCAGGAGGGAGGCCGTCGTGCGGGGCCCTCGGCTTGAAGGCCGTCATCCACCCACGGCTGGGTTGGTAGGGGCACGGTCAGTGCACGGCGCGGCACTGAGCGCGGTGCGGTGCGGCTCGGTGCAGGAGCGCGGTGCGGCGCACGCAAGGAGGAGCGGCGCGGCACGGCACGGTGGCTCGGTGACCCGGTGCGCCAGCCTCGCCCGACTCGGCATTTTGCCGAGCACGTGGCGGGCGGCGTGTCAGCCTGCTGGCTGAGGCAAGGAAGGAGGGGGAGTAGACTTGGCTGCAAGAGAGAGGGAGAGCTGGTGAGGGAGCAAAGACATACTTGTGCTGGGGGGTGAGTTGGGCTGGCTGGAAAAGAAGGCCCAACAGAATGGGGACTCTCTGTATTTGTAA GG ATTGGAATTGGGAAGAATTTTGTATTTGGAATTTGTAGATGAACTGTATATTGGTAACTGGACTGAGAATTTGTAATAGGACTATATAATTGGACATTTGATTTGGCTCTG]
[-] EMBL CB643035             [                                                                                                                                                                                                                                                                    AGGCTTCCCCGAAGCACGTGTCGGCGGCGGATGGGATGGACGGCGATAATGTGGGCCCCGAGTGTCGACATCGCTACAGGAAGGAGGCTTACAAGATAAGCTTCGCTGTGAACTAGCTCTCCAATTCGGTGTGGACTCAGTTTTCTCGTTCGGTGTGAACCACTCACACTGTGTTCTTGGTGTTTGGGGAAGAGATTTGGGAGGTGCTTGGTGGGCTAAGAGCACGGTGCAGGAGGGAGGCCGTCGTGCGGGGCCCTCGGCTTGAAGGCCGTCATCCACCCACGGCTGGGTTGGTAGGGGCACGGTCAGTGCACGGCGCGGCACTGAGCGCGGTGCGGTGCGCATCGGTGCAGGAGTGCGGTGTGGCGCACGCAAGGAGGAGCGGCGTGGCTCGGCACGGTGGCTCGGTGACCCGGTGCGCCAGCCTCGCCCGACTCGGCATTTTGCCGAGCACGTGGCGGGCGGTGTTTCATCCTGCTGGCTGAGGCAAGGAAGGAGGGGGAGTATACTTGGCTCCAAGAGAGAGGGAGAGCTGGTTAGGGAGCAAAGACATACTTGTGCTGGGGGGTGAGTTGGCCTGTCCGGAAAAGAAGTCCCATCAGAATGGGGACTCTCTGTATTTGTAACGGCATTGGAATTGGGAAGATTTTTGTTTTTGGAATTTGTAGATGACCTGTATATTGGTAGCTTGAAGGGGAATTTGTAATCGGCCTATATAATCGG                  ]




>consensus_1558#0
GCGGATGGCTTCTAGGAGAAGGATCGACACAGTGGTGGAAGGGTGATGTGGCGCGCGTCC
ATAGGTTGGACGGCGGCGGCGCGGGCCCGGGTGTCGTCATCGACACAGTGGAGGGGAGGT
GCGAGGCTGGCGGCGTGAACGCAGCTCACGCGGACGCTCGTCTGCGGCCGATGGAGAGCG
AGGATGCAAGGCGTGGACGAGGAGTAGCGACGCTCACGCGGGCGACGTCCTGGGAGGCGG
CGAAGTGACCATCGGTCACAAGGCTTCCCCGAAGCACGTGTCGGCGGCGGATGGGATGGA
CGGCGATAATGTGGGCCCCGAGTGTCGACATCGCTACAGGAAGGAGGCTTACAAGATAAG
CTTCGCTGTGAACTAGCTCTCCAATTCGGTGTGGACTCAGTTTTCTCGTTCGGTGTGAAC
CACTCACACTGTGTTCTTGGTGTTTGGGGAAGAGATTTGGGAGGTGCTTGGTGGGCTAAG
AGCACGGTGCAGGAGGGAGGCCGTCGTGCGGGGCCCTCGGCTTGAAGGCCGTCATCCACC
CACGGCTGGGTTGGTAGGGGCACGGTCAGTGCACGGCGCGGCACTGAGCGCGGTGCGGTG
CGGCTCGGTGCAGGAGCGCGGTGCGGCGCACGCAAGGAGGAGCGGCGCGGCACGGCACGG
TGGCTCGGTGACCCGGTGCGCCAGCCTCGCCCGACTCGGCATTTTGCCGAGCACGTGGCG
GGCGGCGTGTCAGCCTGCTGGCTGAGGCAAGGAAGGAGGGGGAGTAGACTTGGCTGCAAG
AGAGAGGGAGAGCTGGTGAGGGAGCAAAGACATACTTGTGCTGGGGGGTGAGTTGGGCTG
GCTGGAAAAGAAGGCCCAACAGAATGGGGACTCTCTGTATTTGTAAGGATTGGAATTGGG
AAGAATTTTGTATTTGGAATTTGTAGATGAACTGTATATTGGTAACTGGACTGAGAATTT
GTAATAGGACTATATAATTGGACATTTGATTTGGCTCTG

clustalw multiple alignements is not computed in this case