cluster # 1560

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Oryza sativa
cluster # 1560 cluster # 1560 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1560#0 length = 532 sequences # 2

consensusID : consensus_1560#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 532
fasta sequence

                              [TTTGCTCTGGAGACTTCGAAATTATCATGTTAAATGGTGAAAAAAAGGTACTTGGTTCAAGTTCTTGGCAGAGTCNTCTACACAAGATGTAACTTCATCTGGCCCTGCTGCAGCTGATCACGAGACGACAGTATGAGCATGCAGCAGAGAGCAGCTGCACCTGCTCTCTTGCCTTCTCTCTCTCAGCTCCTCTCACTCACCGCTGCATAGGCAGAAGATGTTAAGATCGGGTCAATCACTTGCTCTGCACAAGCATTGTGCAAATTGAGTTGACAAATGCAGATGAAAACGAAATGCATGGACACCTGTGAGCAGCTCATGTGATAGCCTATAATCATGCCACGCCGCTGCCAGTGTTAATTTATATCTCTATGCGTCTGCTGGTTTTTGTTCCAGTTCATATTTTCAGAAGCCTAAAAGAAATTAGCATGAAACTTGAGTTTTCTTTCTTGAAGATGACCCTATGCAGCTCCACTTTTGATATATTGATGACTGGTTCTTTGGTCAGGGAAGTTATCTCATAATTTCATTG]

[+] EMBL CA764757             [TTTGCTCTGGAGACTTCGAAATTATCATGTTAAATGGTGAAAAAAAGGTACTTGGTTCAAGTTCTTGGCAGAGTCNTCTACACAAGATGTAACTTCATCTGGCCCTGCTGCAGCTGATCACGAGACGACAGTATGAGCATGCAGCAGAGAGCAGCTGCACCTGCTCTCTTGCCTTCTCTCTCTCAGCTCCTCTCACTCACCGCTGCATAGGCAGAAGATGTTAAGATCGGGTCAATCACTTGCTCTGCACAAGCATTGTGCAAATTGAGTTGACAAATGCAGATGAAAACGAAATGCATGGACACCTGTGAGCAGCTCATGTGATAGCCTATAATCATGCCACGCCGCTGCCAGTGTTAATTTATATCTCTATGCGTCTGCTGGTTTTTGTTCCAGTTCATATTTTCAGAAGCCTAAAAGAAATTAGCATGAAACTTGAGTTTTCTTTCTTGAAGATGACCCTATGCAGCTCCACTTTTGATATATTGATGACTGGTTCTTTGGTCAGGGAAGTTATCTCATAATTTCATTG]
[-] EMBL AU225797             [                                                                                                       ccgctTGCAGCTGATCACGAGACGACAGTATGAGCATGCAGCAGAGAGCAGCTGCACCTGCTCTCTTGCCTTCTCTCTCTCAGCTCCTCTCACTCACCGCTGCATAGGCAGAAGATGTTAAGATCGGGTCAATCACTTGCTCTGCACAAGCATTGTGCAAATTGAGTTGACAAATGCAGATGAAAACGAAATGCATGGACACCTGTGAGCAGCTCATGTGATAGCCTATAATCATGCCACGCCGCTGCCAGTGTTAGTTTATATCTCTATGCGTCTGCTGGTTTTTGTTCCAGTTCATATTTTCAGAAGCCTAAAAGAAATTAGCATGAAACTTGAGTTTTCTTTCTTGAAGATGACCCTATGTAGCTCCACTTTTGATATATTGATGACTGGTagcggc                             ]




>consensus_1560#0
TTTGCTCTGGAGACTTCGAAATTATCATGTTAAATGGTGAAAAAAAGGTACTTGGTTCAA
GTTCTTGGCAGAGTCNTCTACACAAGATGTAACTTCATCTGGCCCTGCTGCAGCTGATCA
CGAGACGACAGTATGAGCATGCAGCAGAGAGCAGCTGCACCTGCTCTCTTGCCTTCTCTC
TCTCAGCTCCTCTCACTCACCGCTGCATAGGCAGAAGATGTTAAGATCGGGTCAATCACT
TGCTCTGCACAAGCATTGTGCAAATTGAGTTGACAAATGCAGATGAAAACGAAATGCATG
GACACCTGTGAGCAGCTCATGTGATAGCCTATAATCATGCCACGCCGCTGCCAGTGTTAA
TTTATATCTCTATGCGTCTGCTGGTTTTTGTTCCAGTTCATATTTTCAGAAGCCTAAAAG
AAATTAGCATGAAACTTGAGTTTTCTTTCTTGAAGATGACCCTATGCAGCTCCACTTTTG
ATATATTGATGACTGGTTCTTTGGTCAGGGAAGTTATCTCATAATTTCATTG

clustalw multiple alignements is not computed in this case