These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1457 fasta sequence [GCTTCCAATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA-GGCAATCTCTGCTGTGATGA-GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG-TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT-GGT-CATCTC-TCAGAAGACAAT-GGTTTT-GATGTATTC-ATCAAT-GGACG-CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG--CCA-CTC-AAT-CATCGA-TTG-ATGCTATGCCTA-CT-GTG--AAGATTA--CA-CAGA-GGCATCTCAGT-GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA-TTAGCCTGGTAATCTGGTTGGAGTCCT-CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC-TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAATGTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATCTCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAGAAGCAAGTTGCCTGAAAAAAAAACAAAAAGGGGAAAAAAAAAAAGAA] [+] EMBL AK070491 [ CTTCCAATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAGATAC ] [+] EMBL CF320687 [gagtagAAAATTTTTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTTCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCC ] [+] EMBL CF293947 [ ccATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTANACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTCTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT G ] [+] EMBL CF296134 [ TTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAATNGGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGC ] [+] EMBL OSS14764A [ GCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGNCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGAGGGCAATCTCTGCTGTGATGAGGGCATGGCATGGCGGGAACGAACCGGGAAGTTTATGTTAAGAGGAAGGCCAAACATA ] [+] EMBL CB671755 [ CCTTTTCCGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCAC ] [+] EMBL CB648122 [ CCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCA ] [+] EMBL CF281076 [ TCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAG ] [+] EMBL CB679849 [ GTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAAGA ] [+] EMBL CB665627 [ GCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCACGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTG ] [-] EMBL CB665628 [ ATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCT ] [+] EMBL CF196572 [ CGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCACACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGNNNACCAATGGACGTCAAANNNNNNNNNATCCGTTCTCGNNNNTATGGCCTTTCCGANNNTCAAG ] [+] EMBL AU089754 [ TTCCTGGGTCCATCTCTTCAGAAGACAAT GGTTTTNGATGTATTCAATCAATGGGACGCCCGTGGTGTTGGCATNCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAG ATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCNCCACAGAGCTCTACTGGTGCTAGCT NTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAaaaaaaa ] [+] EMBL BM038305 [ cCCTGCCCCACCTCAAATCCATCGATTTGAATGCTATCCCTACCTGGTGGAAAGATTAACCACCAGAGGGCATCTCAGTGGGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTACCTGCTCACGCACAAGATCAACC ACC AAGTCAGAGTTCAAGTAGCCATGGGAGAACCCATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGACTTAGCCTGGTAATCTGGTTGGAGTCCTCCAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCC ATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATACCCNCNCCACAGCTTCATATCAaagaaaaaa ] [-] EMBL CB648123 [ CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTTTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAATGTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATCTCAAGGGATCAATGGTAGCAAGCATGATGGTATAATATAGAAGCAAGTTGCCTGAAAAAAAAACAAAAAGGGG ] [-] EMBL CF281075 [ ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTAaaa ] [-] EMBL CB659516 [ GTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCCCTCTGATTGCATAGTTCCTTGGGTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCCCCACAGAGCTTTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTTTCGTTCCTATGGCCTTTCCGATCATCAAGCTTTAGCTTTCGTTAGA TTAGCCTGGTAATTTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATTTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCCCCCCGGAATGCTTTTCCTTGCAAGTATATCC TTCCCCAGCTTCATATCAGATACTTTTTTTACTATTTTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTTTTAATGTTGTATTACTTAATGTTTTACAGCAGAATATACTTTTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATTTCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAGAAGCAAGTTGCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA] [-] EMBL CB671756 [ TTGAGCTGGGATCAAAAGCAAGGGAGATGCCATGCAAGCATTTATACCCCTTTGATTGCATAGTTCCTTGGGGGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCCCCCCAGAGCTTTATTGGTGCTAGCTGCTCGGGCCCAAGATCAACCACCCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGGCGTCAAAGGAGAAGGAATCCGTTTTTGTTCTTATGGCCTTTCCGATCATCAAGCTTTAGCTTTCGTTAGA TTAGCCTGGTAATTTGGTTGGAGTCCT CAAGACTGTTTAATTGAAGAGGTTCATAAAATGGGGGTTATGCAGGGCATTTTATCGTCCAATTTGTAATGTATGGCTTGTTATGATCCCCCCGGAATGCTTTTCCTTGCAAGTATATCC TTCCCCAGCTTCATATCAGATACTTTTTTTATTATTTTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTTTTAATGTTGTATTACTTAATGTTTTACAGCAGAAAATACTTTTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATTTCAAGGGATCAATGGTAGCAAGCATGATGATtt ] [-] EMBL CF293948 [ GAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGGACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAGGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAAATCTCGTTAGA TTAGCCTAGAAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATG ] [-] EMBL CF296135 [ GCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCAAACCGATCATCAAGCTCTAGCTCTAATTAGA TTAGCCTGGTAATAAAAATGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTATTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCA AAAAACAGCTTCAT TCAaaaa ] [-] EMBL CF320688 [ CCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGGTAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAATGTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATCTCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAAAAaaa ] [+] EMBL AU094652 [ GCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAaa ] consensusID : consensus_15621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence [ATCCAAACTGATGATCTTTGCCTGATCTTTGCTTTTTTCAGATAGGAATTCTTGAACTCGCAACTTCTTTCAGACACATCAGGTTTCCCTCTTATAGAGCCAGGGATAGTTTGTCTCACAGACTAATACTAGATACTTATGTTCGGTTCATAGGCTGCCTCACACTGATTTATTCCCAAAAAAAAAAAGAAATCAAACTGGATCAATTACACTAGATGCTGCAACCAGGCTAAAATCCAAGAACAGGCTAAATTCCCACTCGCCCGTAGATCAATCAGTTCATGGTAAGACTAAAAACTCTACAACAGCCACCTTTTCCACACGATTCACTCCATTCAAAATGAAAAAAAAAAAAGAAAAAGAAAGAAAAGAAAACTGATTGCAGATAACTCCCAAGATTACGCGGCCCGAGGCAAACAAATTGAATAGAAAAAAAAACACGCACACGAATAGCGGTTTCCGCTGGTTCGATTACGATACCAGATAGGTGAGGAGGAGGCGGCGGCGGTTTGTGGTGGCGAGGAGCGGTGGGAGGA] [+] EMBL CA305870 [ATCCAAACTGATGATCTTTGCCTGATCTTTGCTTTTTTCAGATAGGAATTCTTGAACTCGCAACTTCTTTCAGACACATCAGGTTTCCCTCTTATAGAGCCAGGGATAGTTTGTCTCACAGACTAATACTAGATACTTATGTTCGGTTCATAGGCTGCCTCACACTGATTTATTCCCAAAAAAAAAAAGAAATCAAACTGGATCAATTACACTAGATGCTGCAACCAGGCTAAAATCCAAGAACAGGCTAAATTCCCACTCGCCCGTAGATCAATCAGTTCATGGTAAGACTAAAAACTCTACAACAGCCACCTTTTCCACACGATTCACTCCATTCAAAATGAAAAAAAAAAAAGAAAAAGAAAGAAAAGAAAACTGATTGCAGATAACTCCCAAGATTACGCGGCCCGAGGCAAACAAATTGAATAGAAAAAAAAACACGCACACGAATAGCGGTTTCCGCTGGTTCGATTACGATACCAGATAGGTGAGGAGGAGGCGGCGGCGGTTTGTGGTGGCGAGGAGCGGTGGGAGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15621#0 GCTTCCAATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGC 60 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 CTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCC 120 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 TCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTG 180 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 ATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGT 240 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 GAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAAT 300 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 GGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGA 360 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 TCCAAGATTCGGTATCATGGAGGCAATCTCTGCTGTGATGAGGCATGGCATGGCGGGAAC 420 consensus_15621#1 --------------------------------------------------------ATCC 4 * consensus_15621#0 GAACCGG-GAAGTTGATGTGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGT 479 consensus_15621#1 AAACTGATGATCTTTGCCTGATCTTTGCTTTTTTCAGATAGGAATTCTTGAACTCGCAAC 64 *** * ** ** *** ** ** * ** * * * consensus_15621#0 TTGGCTCAGGGCCAT--GGTTGCTCTTCCGTGG--CCAGCTTCCTGGTCATCTCTCAGAA 535 consensus_15621#1 TTCTTTCAGACACATCAGGTTTCCCTCTTATAGAGCCAGGGATA-GTTTGTCTCACAGAC 123 ** **** *** **** * ** * * **** * * **** **** consensus_15621#0 GACAATGGTTTTGATGTATTCA-TCAATGGACGCCGTGGTGTTGGCATGCGCAGAGCAAA 594 consensus_15621#1 TAATACTAGATACTTATGTTCGGTTCATAGGCTGCCTCACACTGATTTATTCCCAAAAAA 183 * * * * * *** * ** * * * * ** * * * *** consensus_15621#0 CATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAA 654 consensus_15621#1 AAAAAGAAATCAAACTGGATCAATTACACTAGATGCTGCAACCAGGCTAAAATCCAAGAA 243 * * * * ** * * *** **** * * ** * * * **** consensus_15621#0 TGATCGACGAGGGCCGCCACCTGCCACTCAATCA-TCGATTGATGCTATGCCTACTGTGA 713 consensus_15621#1 CAGGCTA----AATTCCCACTCGCCCGTAGATCAATCAGTTCATGGTAAG---ACTAAAA 296 * * **** *** * **** ** ** *** ** * *** * consensus_15621#0 AGATTACA-CAGAGGCATCTCAGTGGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTT 772 consensus_15621#1 ACTCTACAACAGCCACCTTTTCCACACGATTCACTCCATTCAAAATGAAAAAAAAAAAAG 356 * **** *** * * * ** **** * ** ** * ** consensus_15621#0 GAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATA 832 consensus_15621#1 AAA--AAGAAAGAAAAGAAAACTGATTGCAGATAACTCCCAAGATTACGCGGCCCG---A 411 * ** ** ** *** ** ** * * ** * * * * consensus_15621#0 GTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAG 892 consensus_15621#1 GGCAAACAAATTGAATAGAAAAA---AAAACACGCACACGAATAGCGGTTTCCGCTG--G 466 * * *** ** * ** * * * *** *** ** * * consensus_15621#0 AGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTT--CAA 950 consensus_15621#1 TTCGATTACGATACCAGATAGGTG-----AGGAGGAGGCGGCGGCGGTTTGTGGTGGCGA 521 * * * * * ** * * * ** * * * ** * * * * * consensus_15621#0 GTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGC 1010 consensus_15621#1 GGAGCGGTGGGAGGA--------------------------------------------- 536 * *** ****** * consensus_15621#0 CTTTCCGATCATCAAGCTCTAGCTCTCGTTAGATTAGCCTGGTAATCTGGTTGGAGTCCT 1070 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCC 1130 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 AATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC 1190 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGAT 1250 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 AGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAAT 1310 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 GTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATC 1370 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 TCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAGAAGCAAGTTGCCTGAAAAAA 1430 consensus_15621#1 ------------------------------------------------------------ consensus_15621#0 AAACAAAAAGGGGAAAAAAAAAAAGAA 1457 consensus_15621#1 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||