cluster # 1563

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Oryza sativa
cluster # 1563 cluster # 1563 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1563#0 length = 968 sequences # 2

consensusID : consensus_1563#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 968
fasta sequence

                              [CAACAAATGCGAACGGATACTGTCTTGTTAACCAAAGAAGAAGGTGGTTCACCTATCCGAAATCCTCCAACTGCTGCTGAAGATGCACGATTGGCATCTCTCATATCTTTAGACAACATCATAAAACAAGTGAAGGAAGTAATGAGACAAAGTTCAGCAAGGCCATTGAGAAAATCAAAAAAGAAAGCGTTGCTAGAATCATTGGATGATCTATTGGCACAAATGCCTTCTCTTCTTGACGTTGATCATCCTTGTGCTCAGAAGCAGATCATGGAAGCAAGGAAAGTTGTAGAGTCACTGCAAGAGGATCCCGATGAACCTGCCACAGATTTGAATTCAAACACACTGGGCGAGAGCGAAGTTTCACAGTGGAACGTACTACAGTTCAACACTGGAACATCAGCCCCATTCATCATAAAATGTGGAGCAAATTCGAGCTGTGAACTGGTCATTAAGGCTGACCAAAAAATTCAGGAACCTAAAGGTGATGAGATAATCCGAGTTGTT-CCAAAGCCATCAGTTCTTGCAGAAATGA-GCT-TTGAGGAAATAAAAGGTGTCTTTGAGGAATTA-CCAGAAGCAATCAGCTTGCTTG-CCCTGGCACGAACCG-CCGATG-GTACAAGAG-CCAGATATT-CTAGA-CTGTA-CAGAACTCTAGCTAACAAAGTACCAGCCTTGAAAGACATCGTTGCGGAGATGGAGAAAGGTGGTGTTTTCAAGGATGT-CAGATCATAGTTTTAGTTCATTCTTAGAGTTTATATATTACTCCCTATGTTGTATATGGATG-CCAATTGAGGGCATTCGGTGTAACTTCC-TTTTTTTTGTTTATACAATGAACAAGCCTATGTTGTAACATTATTTTTTGGTCGAGAGAGTTACTTTGCCTCTCTGATTGCCATACTCAGGATGCTTGATGTTTCATAATATTAAGGCAGCCGTAGCTGATAAATGCTTGTTCAAAGCAGCATTTTGAT]

[+] EMBL AK071349             [CAACAAATGCGAACGGATACTGTCTTGTTAACCAAAGAAGAAGGTGGTTCACCTATCCGAAATCCTCCAACTGCTGCTGAAGATGCACGATTGGCATCTCTCATATCTTTAGACAACATCATAAAACAAGTGAAGGAAGTAATGAGACAAAGTTCAGCAAGGCCATTGAGAAAATCAAAAAAGAAAGCGTTGCTAGAATCATTGGATGATCTATTGGCACAAATGCCTTCTCTTCTTGACGTTGATCATCCTTGTGCTCAGAAGCAGATCATGGAAGCAAGGAAAGTTGTAGAGTCACTGCAAGAGGATCCCGATGAACCTGCCACAGATTTGAATTCAAACACACTGGGCGAGAGCGAAGTTTCACAGTGGAACGTACTACAGTTCAACACTGGAACATCAGCCCCATTCATCATAAAATGTGGAGCAAATTCGAGCTGTGAACTGGTCATTAAGGCTGACCAAAAAATTCAGGAACCTAAAGGTGATGAGATAATCCGAGTTGTT CCAAAGCCATCAGTTCTTGCAGAAATGA GCT TTGAGGAAATAAAAGGTGTCTTTGAGGAATTA CCAGAAGCAATCAGCTTGCTTG CCCTGGCACGAACCG CCGATG GTACAAGAG CCAGATATT CTAGA CTGTA CAGAACTCTAGCTAACAAAGTACCAGCCTTGAAAGACATCGTTGCGGAGATGGAGAAAGGTGGTGTTTTCAAGGATGT CAGATCATAGTTTTAGTTCATTCTTAGAGTTTATATATTACTCCCTATGTTGTATATGGATG CCAATTGAGGGCATTCGGTGTAACTTCC TTTTTTTTGTTTATACAATGAACAAGCCTATGTTGTAACATTATTTTTTGGTCGAGAGAGTTACTTTGCCTCTCTGATTGCCATACTCAGGATGCTTGATGTTTCATAATATTAAGGCAGCCGTAGCTGATAAATGCT                     ]
[+] EMBL BI805974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTAAAGGTGATGAGATAATCCGATTTGTTCCCAAAGCCATCAGTTC TCCAGAAATGACGCTCTTGAGGAAATAAAAGGTGTCTTTGAGGAATTACCCAGAACCAATCAGCTTGCTTGCCCCTGGCACGAACCGCCCGATGTGTACAAGAGCCCAGATATTNNTAGACCTGTACCAGAACTCTAGCTAACAAAGTACCAGCCTTGAAAGACATCGTTCCGGAGATGGAGAAAGGTGGTGTTTTCAAGGATGTCCAGATCATAGTTTTAGTTCATTCTTAGAGTTTATATATTACTCCCTATGTTGTATATGGATGCCCAATTGAGGGCATTCGGTGTAACTTCCNTTTTTTTTGTTTATACAATGAACAAGCCTATGTTGTAACATTATTTTTTGGTCGAGAGAGTTACTTTGCCTCTCTGATTGCCATACTCAGGATGCTTGATGTTTCATAATATTAAGGCAGCCGTAGCTGATAAATGCTTGTTCAAAGCAGCATTTTGAT]




>consensus_1563#0
CAACAAATGCGAACGGATACTGTCTTGTTAACCAAAGAAGAAGGTGGTTCACCTATCCGA
AATCCTCCAACTGCTGCTGAAGATGCACGATTGGCATCTCTCATATCTTTAGACAACATC
ATAAAACAAGTGAAGGAAGTAATGAGACAAAGTTCAGCAAGGCCATTGAGAAAATCAAAA
AAGAAAGCGTTGCTAGAATCATTGGATGATCTATTGGCACAAATGCCTTCTCTTCTTGAC
GTTGATCATCCTTGTGCTCAGAAGCAGATCATGGAAGCAAGGAAAGTTGTAGAGTCACTG
CAAGAGGATCCCGATGAACCTGCCACAGATTTGAATTCAAACACACTGGGCGAGAGCGAA
GTTTCACAGTGGAACGTACTACAGTTCAACACTGGAACATCAGCCCCATTCATCATAAAA
TGTGGAGCAAATTCGAGCTGTGAACTGGTCATTAAGGCTGACCAAAAAATTCAGGAACCT
AAAGGTGATGAGATAATCCGAGTTGTTCCAAAGCCATCAGTTCTTGCAGAAATGAGCTTT
GAGGAAATAAAAGGTGTCTTTGAGGAATTACCAGAAGCAATCAGCTTGCTTGCCCTGGCA
CGAACCGCCGATGGTACAAGAGCCAGATATTCTAGACTGTACAGAACTCTAGCTAACAAA
GTACCAGCCTTGAAAGACATCGTTGCGGAGATGGAGAAAGGTGGTGTTTTCAAGGATGTC
AGATCATAGTTTTAGTTCATTCTTAGAGTTTATATATTACTCCCTATGTTGTATATGGAT
GCCAATTGAGGGCATTCGGTGTAACTTCCTTTTTTTTGTTTATACAATGAACAAGCCTAT
GTTGTAACATTATTTTTTGGTCGAGAGAGTTACTTTGCCTCTCTGATTGCCATACTCAGG
ATGCTTGATGTTTCATAATATTAAGGCAGCCGTAGCTGATAAATGCTTGTTCAAAGCAGC
ATTTTGAT

clustalw multiple alignements is not computed in this case