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Oryza sativa
cluster # 1568 cluster # 1568       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1568#0 length = 1140 sequences # 2  

consensusID : consensus_1568#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1140
fasta sequence
                              [ACAAACTAGAAACACGAGCAGAAGTAGTAAGAGGTTCAAATCTCTAGCCACCCCCACAGCCGAGTTCCTGAAACTGATCGACAGAAATGGCCGGAGGAGGAGATGAGCTGAAGCTTTTGGGCACATGGTTCAGCCCGTTCGTTTCCAGAGTGAAGTTCGTGTTCCACCTCAAGGGCCTGAGCTACGAGAACATCGAGGAGGACCTCAAGAACAAGAGCGAGCTCCTCCTCAAGAGCAACCCGGCGATCAAGAAGGTACCCGTGCTCTTCCACAACGGCAAGCCACTCTGCGAGTCCATGATCATCGTCGAGTACATCGACGAGACCTTCGCCGGCGTCGGCCCGTCCGTCGTCCCCACCGATGCCTATGAACGCGCCGTCGCTCGCTTCTGGGTCTCCTACATCGACAACAAGCTAGTGGCGCCATGGTTCCAGGTGTTCAGGAGCAAGTCGATGGAGGAGAAGGCGGAGGGGCTGAAGCAGATCTTCGTGGCGGTGATGGTGCTGGAGGAGGCGTTCAAGGAGTGCTCCAAGGGGAGGCCATTCTTCGGCGGCGACAACGCCGGGATCGTGGACATCGCGCTCGGCAGCCAGCTCGGGTGGGTGCGCGCATCCCAGGCGCTGTCCGGCATCAAGCTGTTCGATCCCGCCAAGACGCCGCTTCTGGCGGCCTGGGCGGAGCGCTTCCTCGCGCTGGACGCGGCGAAGGCGTCCATGCCGGAGTTCGGCAGGCTGATCGAGTATGCCAAGATGAGGCAGGCCGAGTCTGACGCCGCGAACGCAGCAGCCAACTGATCACCACTCACCAACCAACTGCGATGAGCTGAGCAGACTCGCCCCTGCAAGTGTCGATTTGGGGAAAGCGAGTTAATAATTTGTGTCCTGTTTGTGTCAAGTGTCAACTGCTTCATTGTTGCTCTGCACCTCTGCCTACGTTGCGCAACTTGTTCCATGCCAGTGTTTTGTTCAGTCAGTCTGTCGTTGTTCCATGTCGTGTTTGTTTATGACCAATAAATATATTTGTATCCTTTTATTTTAAAAAACGCACAGACATTATATATCCTTGTAAAACAATACATGCCAAAAAATATGAAATTTGAACAAAGTTTTATTTTCTTGGTCAGCGGCGAAGAAGTGCCCT]

[+] EMBL AK107032             [ACAAACTAGAAACACGAGCAGAAGTAGTAAGAGGTTCAAATCTCTAGCCACCCCCACAGCCGAGTTCCTGAAACTGATCGACAGAAATGGCCGGAGGAGGAGATGAGCTGAAGCTTTTGGGCACATGGTTCAGCCCGTTCGTTTCCAGAGTGAAGTTCGTGTTCCACCTCAAGGGCCTGAGCTACGAGAACATCGAGGAGGACCTCAAGAACAAGAGCGAGCTCCTCCTCAAGAGCAACCCGGCGATCAAGAAGGTACCCGTGCTCTTCCACAACGGCAAGCCACTCTGCGAGTCCATGATCATCGTCGAGTACATCGACGAGACCTTCGCCGGCGTCGGCCCGTCCGTCGTCCCCACCGATGCCTATGAACGCGCCGTCGCTCGCTTCTGGGTCTCCTACATCGACAACAAGCTAGTGGCGCCATGGTTCCAGGTGTTCAGGAGCAAGTCGATGGAGGAGAAGGCGGAGGGGCTGAAGCAGATCTTCGTGGCGGTGATGGTGCTGGAGGAGGCGTTCAAGGAGTGCTCCAAGGGGAGGCCATTCTTCGGCGGCGACAACGCCGGGATCGTGGACATCGCGCTCGGCAGCCAGCTCGGGTGGGTGCGCGCATCCCAGGCGCTGTCCGGCATCAAGCTGTTCGATCCCGCCAAGACGCCGCTTCTGGCGGCCTGGGCGGAGCGCTTCCTCGCGCTGGACGCGGCGAAGGCGTCCATGCCGGAGTTCGGCAGGCTGATCGAGTATGCCAAGATGAGGCAGGCCGAGTCTGACGCCGCGAACGCAGCAGCCAACTGATCACCACTCACCAACCAACTGCGATGAGCTGAGCAGACTCGCCCCTGCAAGTGTCGATTTGGGGAAAGCGAGTTAATAATTTGTGTCCTGTTTGTGTCAAGTGTCAACTGCTTCATTGTTGCTCTGCACCTCTGCCTACGTTGCGCAACTTGTTCCATGCCAGTGTTTTGTTCAGTCAGTCTGTCGTTGTTCCATGTCGTGTTTGTTTATGACCAATAAATATATTTGTATCCTTTTATTTTAAAAAACGCACAGACATTATATATCCTTGTAAAACAATACATGCCAAAAAATATGAAATTTGAACAAAGTTTTATTTTCTTGGTCAGCGGCGAAGAAGTGCCCT]
[+] EMBL CA757431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCAGCAGCCAACTGATCACCACTCACCAACCAACTGCGATGAGCTGAGCAGACTCGCCCCTGCAAGTGTCGATTTGGGGAAAGCGAGTTAATAATTTGTGTCCTGTTTGTGTCAAGTGTCAACTGCTTCATTGTTGCTCTGCGCCTCTGCCTACGTTGCGCAACTTGTTCCATGCCAGTGTTTTGTTCAGTCAGTCTGTCGTTGTTCCATGTCGTGTTTGTTTATGACCAATAAATATATTTGTATCCTTTTATTTTAAAAAAaaaaaaa                                                                                           ]


>consensus_1568#0 ACAAACTAGAAACACGAGCAGAAGTAGTAAGAGGTTCAAATCTCTAGCCACCCCCACAGC CGAGTTCCTGAAACTGATCGACAGAAATGGCCGGAGGAGGAGATGAGCTGAAGCTTTTGG GCACATGGTTCAGCCCGTTCGTTTCCAGAGTGAAGTTCGTGTTCCACCTCAAGGGCCTGA GCTACGAGAACATCGAGGAGGACCTCAAGAACAAGAGCGAGCTCCTCCTCAAGAGCAACC CGGCGATCAAGAAGGTACCCGTGCTCTTCCACAACGGCAAGCCACTCTGCGAGTCCATGA TCATCGTCGAGTACATCGACGAGACCTTCGCCGGCGTCGGCCCGTCCGTCGTCCCCACCG ATGCCTATGAACGCGCCGTCGCTCGCTTCTGGGTCTCCTACATCGACAACAAGCTAGTGG CGCCATGGTTCCAGGTGTTCAGGAGCAAGTCGATGGAGGAGAAGGCGGAGGGGCTGAAGC AGATCTTCGTGGCGGTGATGGTGCTGGAGGAGGCGTTCAAGGAGTGCTCCAAGGGGAGGC CATTCTTCGGCGGCGACAACGCCGGGATCGTGGACATCGCGCTCGGCAGCCAGCTCGGGT GGGTGCGCGCATCCCAGGCGCTGTCCGGCATCAAGCTGTTCGATCCCGCCAAGACGCCGC TTCTGGCGGCCTGGGCGGAGCGCTTCCTCGCGCTGGACGCGGCGAAGGCGTCCATGCCGG AGTTCGGCAGGCTGATCGAGTATGCCAAGATGAGGCAGGCCGAGTCTGACGCCGCGAACG CAGCAGCCAACTGATCACCACTCACCAACCAACTGCGATGAGCTGAGCAGACTCGCCCCT GCAAGTGTCGATTTGGGGAAAGCGAGTTAATAATTTGTGTCCTGTTTGTGTCAAGTGTCA ACTGCTTCATTGTTGCTCTGCACCTCTGCCTACGTTGCGCAACTTGTTCCATGCCAGTGT TTTGTTCAGTCAGTCTGTCGTTGTTCCATGTCGTGTTTGTTTATGACCAATAAATATATT TGTATCCTTTTATTTTAAAAAACGCACAGACATTATATATCCTTGTAAAACAATACATGC CAAAAAATATGAAATTTGAACAAAGTTTTATTTTCTTGGTCAGCGGCGAAGAAGTGCCCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)