Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1569 cluster # 1569       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1569#0 length = 800 sequences # 2  

consensusID : consensus_1569#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 800
fasta sequence
                              [CACATCCCCTCCTCTTCTTATCCACTTCTCTTCTCTCCTCCTCACTCTCCTCCCTCCCGGCCTCTCCACCGGCGACGGCGGCGGTAGTCCCATCCCCTCATCTCCCCTCTCCCAGATCTATCCGAGGGGAGGAGGCGACCGCCGGCGCAACAGAGGGCGACGGCGGCGGGCGGTGGATGTGCACGCGGCGTGGGGAGCACGCAGGCGGCGACGGAGTTGACGACGATGCTGCCGGCCGGCCTCGGCGACCTTGACCACGCGCGACTCTTCTGGAGGAGGCCTGCGGCGACGACCTGCGGCTCCCTGCGCCACCCCTGCCCTGCCATCCCCTTCTCTCCCCTCTCCCAGATCTATCCGAGGGGAGGAGGTCGCCGCCGGCGCAACAGAGGGCGATAGCGGCGGGCGGCGGATGTGCACACGGGCGGCGGCGGAGCTGACGACAACGACCGCGACTGTGGCAACGACGATGACGCTGCCGGCCTGGCTCGGCCACCTTGGCAACATGTGACTCTTTTGGAGGAGGCCTGCGGCGGCGGCTCACAACTCAGGATCTCTTGGTGACGGGTGGCGGCACAGCAGAGGGCAAGCAGTGGCGGCGCCACTGCCCTCCTCTTGTGTTTTCTTGTGTGTTTTTGTCCGTTTTTGTTTGTAAGGACGTTTGTTAGGTTAATCTGTGTGTTGTTAATCTGTTCTATTGATGATGCTAATGTTGTATTTGGATTGATGCCAATATTATGTATTTGTGATGCTCTTGATTTTGGATTGATGTCAAATATAAATTGTTTTGAATTTGGCGGGTG]

[+] EMBL AK066649             [CACATCCCCTCCTCTTCTTATCCACTTCTCTTCTCTCCTCCTCACTCTCCTCCCTCCCGGCCTCTCCACCGGCGACGGCGGCGGTAGTCCCATCCCCTCATCTCCCCTCTCCCAGATCTATCCGAGGGGAGGAGGCGACCGCCGGCGCAACAGAGGGCGACGGCGGCGGGCGGTGGATGTGCACGCGGCGTGGGGAGCACGCAGGCGGCGACGGAGTTGACGACGATGCTGCCGGCCGGCCTCGGCGACCTTGACCACGCGCGACTCTTCTGGAGGAGGCCTGCGGCGACGACCTGCGGCTCCCTGCGCCACCCCTGCCCTGCCATCCCCTTCTCTCCCCTCTCCCAGATCTATCCGAGGGGAGGAGGTCGCCGCCGGCGCAACAGAGGGCGATAGCGGCGGGCGGCGGATGTGCACACGGGCGGCGGCGGAGCTGACGACAACGACCGCGACTGTGGCAACGACGATGACGCTGCCGGCCTGGCTCGGCCACCTTGGCAACATGTGACTCTTTTGGAGGAGGCCTGCGGCGGCGGCTCACAACTCAGGATCTCTTGGTGACGGGTGGCGGCACAGCAGAGGGCAAGCAGTGGCGGCGCCACTGCCCTCCTCTTGTGTTTTCTTGTGTGTTTTTGTCCGTTTTTGTTTGTAAGGACGTTTGTTAGGTTAATCTGTGTGTTGTTAATCTGTTCTATTGATGATGCTAATGTTGTATTTGGATTGATGCCAATATTATGTATTTGTGATGCTCTTGATTTTGGATTGATGTCAAATATAAATTGTTTTGAATTTGGCGGGTG]
[+] EMBL C28043               [                                                                                                                       nTCCNAGGGGAGGAGGCGACCGCCGNCGCAACAAAGGGCGACGGCGGCGGGCGGTGGATGTNCACGCGGCGTGGGGAGCACGCAGGCGGCGACGGANTTNACGACGATGCTGCCGGCCGGCCTCGGCNACCTTAACCACGCGCAATTTTTCTGGAGGAGGCCTGCGGCGACGACCTGCGGCTCCCTGCGCCACCCCTGCCCTGCNATCCCCTTTTTTCCCCTCTCCCAGATCTATCCNAGGGGAGGAGGTCGCCGCCGG GCAACAAAGGGCGATA                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_1569#0 CACATCCCCTCCTCTTCTTATCCACTTCTCTTCTCTCCTCCTCACTCTCCTCCCTCCCGG CCTCTCCACCGGCGACGGCGGCGGTAGTCCCATCCCCTCATCTCCCCTCTCCCAGATCTA TCCGAGGGGAGGAGGCGACCGCCGGCGCAACAGAGGGCGACGGCGGCGGGCGGTGGATGT GCACGCGGCGTGGGGAGCACGCAGGCGGCGACGGAGTTGACGACGATGCTGCCGGCCGGC CTCGGCGACCTTGACCACGCGCGACTCTTCTGGAGGAGGCCTGCGGCGACGACCTGCGGC TCCCTGCGCCACCCCTGCCCTGCCATCCCCTTCTCTCCCCTCTCCCAGATCTATCCGAGG GGAGGAGGTCGCCGCCGGCGCAACAGAGGGCGATAGCGGCGGGCGGCGGATGTGCACACG GGCGGCGGCGGAGCTGACGACAACGACCGCGACTGTGGCAACGACGATGACGCTGCCGGC CTGGCTCGGCCACCTTGGCAACATGTGACTCTTTTGGAGGAGGCCTGCGGCGGCGGCTCA CAACTCAGGATCTCTTGGTGACGGGTGGCGGCACAGCAGAGGGCAAGCAGTGGCGGCGCC ACTGCCCTCCTCTTGTGTTTTCTTGTGTGTTTTTGTCCGTTTTTGTTTGTAAGGACGTTT GTTAGGTTAATCTGTGTGTTGTTAATCTGTTCTATTGATGATGCTAATGTTGTATTTGGA TTGATGCCAATATTATGTATTTGTGATGCTCTTGATTTTGGATTGATGTCAAATATAAAT TGTTTTGAATTTGGCGGGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)