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Oryza sativa
cluster # 15717 cluster # 15717       Sequences # 24       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15717#0 length = 2064 sequences # 20  
consensus_15717#1 length = 573 sequences # 2  
consensus_15717#2 length = 458 sequences # 1  
consensus_15717#3 length = 425 sequences # 1  

consensusID : consensus_15717#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 2064
fasta sequence
                              [ACAACTCACAACAGAAGCGGAGAAGAAGAGGAGGAAGAAGTCCATCTCCATCCCCATCCCCATCCCCATCCATCCCTCGC-GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTCTTTGTGCATCATACTGGTCAGCATGGAGTGCTCGAGAAGCAGTTATTGAACAAGAGAAGCTTCTAAAGGATGGCCATGAAAGTTCACTAAACTTAGAGGCTGGTGGTTCTAGTGGCATGGTAGATATCAACATGACATCGGCAATACTGTTTGTTGTTATTGCATCTTGCTTCTTGATAATGCTCTACAAGCTTATGTCTCACTGGTTTGTGGAGCTTCTGGTGGTCATCTTTTGCATTGGTGGTGTAGAGGGTCTGCAAACTTGCTTGGTGGCTTTATTGTCAAGATGGTTTAAACCTGCTGCCGAATCTTTCGTGAAAGTGCCCTTCTTTGGAGCGGTTTCATACCTTACAATCGCAGTCTGTCCATTTTGCATTGTGTTTGCTGTTATATGGGCTGTTTATCGCCGGATGACCTATGCTTGGATTGGGCAAGATATTCTTGGTATTGCTCTGATTGTTACTGTAATCCAAATTGTTAGGATACCTAACCTCAAGGTCGGATCTGTTCTTCTCAGTTGTTCCTTCTTATATGACATCTTTTGGGTTTTTATCTCCAAGATGTGGTTTCATGAGAGTGTGATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT-CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA-CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAATGAAGGAATTTTTAAGTGATTTTAGT]

[+] EMBL CB636562             [ACAACTCACAACAGAAGCGGAGAAGAAGAGGAGGAAGAAGTCCATCTCCATCCCCATCCCCATCCCCATCCATCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB644833             [      CACAACAGCCTCGGAGAAGAAGAGGAGGAAGAAGTCCATCTCCATCCCCATCCCCATCCCCATCCATCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAAGTTGCTGGAGATGCTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK122065             [                 CGGAGAAGAAGAGGAGGAAGAAGTCCATCTCCATCCCCATCCCCATACCCATCCATCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTCTTTGTGCATCATACTGGTCAGCATGGAGTGCTCGAGAAGCAGTTATTGAACAAGAGAAGCTTCTAAAGGATGGCCATGAAAGTTCACTAAACTTAGAGGCTGGTGGTTCTAGTGGCATGGTAGATATCAACATGACATCGGCAATACTGTTTGTTGTTATTGCATCTTGCTTCTTGATAATGCTCTACAAGCTTATGTCTCACTGGTTTGTGGAGCTTCTGGTGGTCATCTTTTGCATTGGTGGTGTAGAGGGTCTGCAAACTTGCTTGGTGGCTTTATTGTCAAGATGGTTTAAACCTGCTGCCGAATCTTTCGTGAAAGTGCCCTTCTTTGGAGCGGTTTCATACCTTACAATCGCAGTCTGTCCATTTTGCATTGTGTTTGCTGTTATATGGGCTGTTTATCGCCGGATGACCTATGCTTGGATTGGGCAAGATATTCTTGGTATTGCTCTGATTGTTACTGTAATCCAAATTGTTAGGATACCTAACCTCAAGGTCGGATCTGTTCTTCTCAGTTGTTCCTTCTTATATGACATCTTTTGGGTTTTTATCTCCAAGATGTGGTTTCATGAGAGTGTGATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAATGAAGGAATTTTTAAGTG        ]
[+] EMBL CB633495             [                                                 ATCTCCCTCCCCATCCCCATCCATCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCACCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTCTTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB637367             [                                                  TCCCCATCCCCATCCCCATCCATCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB672968             [                                                      CATCCCCATCCCCATCCATCCCTCGC GGCGGAGAGCATCGTGGAGGATGAGAGGTCCGGTGGCCATGGGCACCACCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCCAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGGTGCTGGAGATGTTTTGTTAGTGCGAAGGGGAAACTGTAAGTTCACTACAAAAGCTGAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAGTCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB618267             [                                                               CCCCCTCCTTCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGTTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB673741             [                                                                CCCATCCATCCCTCCCTTGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTCTTTGTGCATCATACTGGTCAGCATGGAGTGCTCGAGAAGCAGTTATTGAACAAGAGAAGCTTCTACAGGATGGCCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB628077             [                                                                        TCCCTCGC GGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGTTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTCTTTGTGCATCATACTGGTCAGCATGGAGTGCTCGAGAAGCAGTTATTGAACAAGAGAAGCTTCTAAAGGATGGCCATGAAAGTTCACTAAACTTAGAGGCTGGTGGTTCTAGTGGCATGGTAGATATCAACATGACATCGGCAATACTGTTTGGTGNTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB632318             [                                                                                     GAGAGCAGCGTGCCCTAAGAGAGGTCCGGTGGCCATGGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGGGGTCGCGGACGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTGCTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGAGTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATACAGTCAAAGGAAAAGCATGCCAATCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGGTGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAACGCTAAGAATGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAAGATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCCAAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGCGGGAAAGTTTCGGTGCAGCTATACTCTCCAGACCGTCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB618268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTATCTCCAAGATGTGGTTTCATGAGAGTGTGATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTAGGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTAGGGGCCACATAAGAAATGAAGG                    ]
[+] EMBL CF325316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCATGAGAGTGTGATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAca                                                                                                                                                                                                                                  ]
[-] EMBL CB628078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATGAGAGTGTGATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACGTAAGAAATGAAGGAATTTTTAAGTGATTTTAGT]
[-] EMBL CB673742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATGAGAGTGTGATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAATGAAGGAATTTTTAAGTGATTTTAGT]
[-] EMBL CB672969             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATG TTGATCCCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAGGGAAGGAATTTTTAAGTNATT     ]
[-] EMBL CB633496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGATTGTGGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAAGAGACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTT TTTATGCATAAGAAATGAAGGAATTT               ]
[-] EMBL BU572357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tatagCTGATGAA ACGG GGGGCCATGCTGTT AAAATCCCTCG ATG TTGAT CCATGGGGT GATTCAG ATCA TGGCTTTGGTGATAT CTTCTTCTTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATT GGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGG TCTGGTCTTATGATCACGTATGTTGCCTTG ACCTTATGGATGGTCATGG CAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACctc                                                                                                                                                                      ]
[-] EMBL CB644834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGCTGTAAAAAATCCCACGAATGTTTGAT CCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGTTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTAAGGGGCCACATAAGAAATGAAGG                    ]
[-] EMBL CB636563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAATGAAGGAATTTTT             ]
[-] EMBL CB637368             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAA CTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTAAATAGTTTTGTGGCCACATAAGAAATGAAGGAATT                ]


>consensus_15717#0 ACAACTCACAACAGAAGCGGAGAAGAAGAGGAGGAAGAAGTCCATCTCCATCCCCATCCC CATCCCCATCCATCCCTCGCGGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCAT GGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGG GGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTG CTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGA GTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAA TCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGT TGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAA TGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAA GATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCC AAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCT ATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGT TGGTACCATTCTTTGTGCATCATACTGGTCAGCATGGAGTGCTCGAGAAGCAGTTATTGA ACAAGAGAAGCTTCTAAAGGATGGCCATGAAAGTTCACTAAACTTAGAGGCTGGTGGTTC TAGTGGCATGGTAGATATCAACATGACATCGGCAATACTGTTTGTTGTTATTGCATCTTG CTTCTTGATAATGCTCTACAAGCTTATGTCTCACTGGTTTGTGGAGCTTCTGGTGGTCAT CTTTTGCATTGGTGGTGTAGAGGGTCTGCAAACTTGCTTGGTGGCTTTATTGTCAAGATG GTTTAAACCTGCTGCCGAATCTTTCGTGAAAGTGCCCTTCTTTGGAGCGGTTTCATACCT TACAATCGCAGTCTGTCCATTTTGCATTGTGTTTGCTGTTATATGGGCTGTTTATCGCCG GATGACCTATGCTTGGATTGGGCAAGATATTCTTGGTATTGCTCTGATTGTTACTGTAAT CCAAATTGTTAGGATACCTAACCTCAAGGTCGGATCTGTTCTTCTCAGTTGTTCCTTCTT ATATGACATCTTTTGGGTTTTTATCTCCAAGATGTGGTTTCATGAGAGTGTGATGATTGT GGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACG AATGTTTGATCCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGG GCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGG TTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTT GAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGG CACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACA GCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGA TGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGAT ACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCA GAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGG GCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCACTA GCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAATG AAGGAATTTTTAAGTGATTTTAGT



consensusID : consensus_15717#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 573
fasta sequence
                              [TCTGGACATACTGTTATTCTTTTGGCCCTTCTTTAGGTCTTATGATCACGTATGTTGCCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAANCNGANGGAATTTTTAAGTGATTTTAAAAAAAAA]

[+] EMBL BM419095             [TCTGGACATACTGTTATTCTTTTGGCCCTTCTTTAGGTCTTATGATCACGTATGTTGCCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAANCNGANGGAATTTTTAAGTGATTTTAAAAAAAAA]
[+] EMBL BM419867             [                     TTGCCCCTTCTTTAGGTCTTATGATCACGTATGTTG CCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTGATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGGCAGAATCGCGACTCC CTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAA ATGAAGGAATTTTTAAGTGATTTTAAAAAAAAA]


>consensus_15717#1 TCTGGACATACTGTTATTCTTTTGGCCCTTCTTTAGGTCTTATGATCACGTATGTTGCCC TTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTT GGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGA CAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGT GATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAGAGGCTCACTG ATACGTCTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTCTGGAGG CAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTA GGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCAC TAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAGAAN CNGANGGAATTTTTAAGTGATTTTAAAAAAAAA



consensusID : consensus_15717#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 458
fasta sequence
                              [TGGTGATATATTTTTTCTTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGACAAGAGGACAGCCTGACAGAGTTTGCACGCACATGCACATGCAACCTTCACCGAAGGACCCCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAAAGGCTCACTGATACGTTTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTTTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCACTAGCAGGCATCATTTTTTGTATAGTAACCGGTTATAAGTTTTGTGGCCACATAAGAAATGAAGGAATT]

[-] EMBL CB639166             [TGGTGATATATTTTTTCTTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGGACAAGAGGACAGCCTGACAGAGTTTGCACGCACATGCACATGCAACCTTCACCGAAGGACCCCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGAAAGGCTCACTGATACGTTTGATGTAAATTATATTTGCTCACGGTATTGTAACATAATATGTTCTTTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCATCACTAGCAGGCATCATTTTTTGTATAGTAACCGGTTATAAGTTTTGTGGCCACATAAGAAATGAAGGAATT]


>consensus_15717#2 TGGTGATATATTTTTTCTTGGGCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGC CAAAAAGACCTTGCAATCTGGACAAGAGGACAGCCTGACAGAGTTTGCACGCACATGCAC ATGCAACCTTCACCGAAGGACCCCAATTGTGATGCTGTAAGCTCGTAAGAAAGCTTATCA GCATGGCCTTGGAGTTGGAAAGGCTCACTGATACGTTTGATGTAAATTATATTTGCTCAC GGTATTGTAACATAATATGTTCTTTGGAGGCAGAATCGCGACTCCACTGACTTGTAGTAA CGTAGTACTACGTAGAAGTATTTGTAACTAGGGCACTAGGCTTCAATGCTGTTGTCCTAG TATGGAACTACGGATCCATGTTGTCATCACTAGCAGGCATCATTTTTTGTATAGTAACCG GTTATAAGTTTTGTGGCCACATAAGAAATGAAGGAATT



consensusID : consensus_15717#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence
                              [GCTTCTCCTCCCCCTCTTTACCTTTTCCTCCTCGGTTCGGTTCCGTGGTTCGTCTAGGGTTTAGTGGGTTGAGATGGCGGCGCCGGATGTCGAGTACCGCTGCTTCGTGATCTGCCTCTCCTTGGCCTGCGACCGCCGCTGCCTTAAGGCATGACTTTGCCTGCTACAAACACCTTGCTATCTGGCTACTTTATCTGGTCAATGGTAACTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAAGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGA]

[+] EMBL CF325338             [GCTTCTCCTCCCCCTCTTTACCTTTTCCTCCTCGGTTCGGTTCCGTGGTTCGTCTAGGGTTTAGTGGGTTGAGATGGCGGCGCCGGATGTCGAGTACCGCTGCTTCGTGATCTGCCTCTCCTTGGCCTGCGACCGCCGCTGCCTTAAGGCATGACTTTGCCTGCTACAAACACCTTGCTATCTGGCTACTTTATCTGGTCAATGGTAACTTATGGTTCTGGTCTTATGATCACGTATGTTGCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAAGAACCTCTGGACAAGAGGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGA]


>consensus_15717#3 GCTTCTCCTCCCCCTCTTTACCTTTTCCTCCTCGGTTCGGTTCCGTGGTTCGTCTAGGGT TTAGTGGGTTGAGATGGCGGCGCCGGATGTCGAGTACCGCTGCTTCGTGATCTGCCTCTC CTTGGCCTGCGACCGCCGCTGCCTTAAGGCATGACTTTGCCTGCTACAAACACCTTGCTA TCTGGCTACTTTATCTGGTCAATGGTAACTTATGGTTCTGGTCTTATGATCACGTATGTT GCCTTGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACG CTTGGCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAAGAACCTCTGGACAAGA GGACAGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAAT TGTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      ACAACTCACAACAGAAGCGGAGAAGAAGAGGAGGAAGAAGTCCATCTCCATCCCCATCCC 60
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      CATCCCCATCCATCCCTCGCGGCGGAGAGCAGCGTGGAGGAGGAGAGGTCCGGTGGCCAT 120
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GGGCACCAGCTCGCCGGAGATGGCGGCCGCGCTCTTGCTGGTCATGGCGGCTCTGGCCGG 180
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GGTCGCGGCCGGCGGCGACATCGTCCACCAGGACGACGAGGCGCCCAAGATCCCCGGCTG 240
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      CTCCAACGACTTCGTCCTCGTAAAAGTGCAAACCTGGGTCAATAACAGAGAGGATGGTGA 300
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GTTTGTTGGTGTTGGTGCTCGTTTTGGCCCCACTATAGAGTCAAAGGAAAAGCATGCCAA 360
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TCGGACAGGACTATTGTTAGCAGATCCTATTGACTGTTGTGATCCCCCCACACAGAAGGT 420
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TGCTGGAGATGTTTTGTTAGTGCAAAGGGGAAACTGTAAGTTCACTAAAAAAGCTAAGAA 480
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TGCTGAAGCTGCTGGGGCTTCTGCTATTATAATCATCAATCATGTCCATGAGCTATACAA 540
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GATGGTCTGCGACCGAAATGAAACAGATTTGGACATAAATATACCTGCAGTTCTTCTGCC 600
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      AAAAGATGCAGGCAATGATTTACAGAAGCTTCTTACACGTGGTAAAGTTTCGGTGCAGCT 660
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      ATACTCTCCAGACCGTCCTCTGGTTGATACTGCAGAGGTGTTTTTGTGGCTTATGGCTGT 720
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TGGTACCATTCTTTGTGCATCATACTGGTCAGCATGGAGTGCTCGAGAAGCAGTTATTGA 780
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      ACAAGAGAAGCTTCTAAAGGATGGCCATGAAAGTTCACTAAACTTAGAGGCTGGTGGTTC 840
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TAGTGGCATGGTAGATATCAACATGACATCGGCAATACTGTTTGTTGTTATTGCATCTTG 900
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      CTTCTTGATAATGCTCTACAAGCTTATGTCTCACTGGTTTGTGGAGCTTCTGGTGGTCAT 960
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      CTTTTGCATTGGTGGTGTAGAGGGTCTGCAAACTTGCTTGGTGGCTTTATTGTCAAGATG 1020
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GTTTAAACCTGCTGCCGAATCTTTCGTGAAAGTGCCCTTCTTTGGAGCGGTTTCATACCT 1080
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TACAATCGCAGTCTGTCCATTTTGCATTGTGTTTGCTGTTATATGGGCTGTTTATCGCCG 1140
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GATGACCTATGCTTGGATTGGGCAAGATATTCTTGGTATTGCTCTGATTGTTACTGTAAT 1200
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      CCAAATTGTTAGGATACCTAACCTCAAGGTCGGATCTGTTCTTCTCAGTTGTTCCTTCTT 1260
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      ATATGACATCTTTTGGGTTTTTATCTCCAAGATGTGGTTTCATGAGAGTGTGATGATTGT 1320
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GGTTGCCCGTGGTGATAAGACTGATGAAGACGGTGTGCCCATGCTGTTAAAAATCCCACG 1380
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      ------------------------------------------------------------
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      AATGTTTGATCCATGGGGTGGATTCAGTATCATTGGCTTTGGTGATATACTTCTTCCTGG 1440
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      -----------------------------------------------------------T 1
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      GCTGTTGATTGCTTTTGCATTAAGGTATGATTGGGCTGCCAAAAAGACCTTGCAATCTGG 1500
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      CTGGACATACTGTTATTCTTTTGGCCCTTCTTTAGGTCTTATGATCACGTATGTTGCCCT 61
consensus_15717#2      ------------------------------------------------------------
consensus_15717#0      TTACTTTTTGTGGTCAATGGTTGCTTATGGTTCTGGTCTTATGATCACGTATGTTGCC-T 1559
consensus_15717#3      ------------------------------------------------------------
                                                                                   

consensus_15717#1      TGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTG 121
consensus_15717#2      -------------------TGGTGATATATTTTTTCTTGGGCTGTTGATTGCT----TTT 37
consensus_15717#0      TGAACCTTATGGATGGTCATGGTCAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTG 1619
consensus_15717#3      --------------------GCTTCTCCTCCCCCTCTTTACCTTTT-CCTCCTCGGTTCG 39
                                           * *           ****    *  *   *  *    *  

consensus_15717#1      GCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGAC 181
consensus_15717#2      GCATTAAGGTATGATTGGGCTGCCAAAAAG----ACCTTGCAA--TCTGGACAAGAGGAC 91
consensus_15717#0      GCACCTTCATAGCGCTCGGCAGGAAACGGGGTGAACTCAGGAACCTCTGGACAAGAGGAC 1679
consensus_15717#3      GTTCCGTGGTTCGTCTAGG--GTTTAGTGGGTTGAGATGGCGGCGCCGGATGTCGAGTAC 97
                       *        *     * **  *   *   *    *    *      * *     *** **

consensus_15717#1      AGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTTACCGAAGGACATCAATTGTG 241
consensus_15717#2      AGCCTGACAGAGTTTGCACGCACATGCACATGCAACCTTCACCGAAGGACCCCAATTGTG 151
consensus_15717#0      AGCCTGAGAGAGTCTGCACGCACATGCACATGCAACCTTCACCGAAGGACACCAATTGTG 1739
consensus_15717#3      CGCTGCTTCGTGATCTGCCTCTCCTTGGCCTGCGACCGCCGCT----GCCTTAAGGCATG 153
                        **      * *      * * * *   * *** ***    *     * *   *    **

consensus_15717#1      ATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGA-GAGGCTCACTG 300
consensus_15717#2      ATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGA-AAGGCTCACTG 210
consensus_15717#0      ATGCTGTAAGCTCGTAAGAAAGCTTATCAGCATGGCCTTGGAGTTGGA-GAGGCTCACTG 1798
consensus_15717#3      ACTTTGCCTGCTAC--AAACACCTTGCTATCTGGCTACTTTATCTGGTCAATGGTAACTT 211
                       *   **   ***    * * * ***   * *  *    *  *  ***   * * * *** 

consensus_15717#1      ATACGTCTGATGTAA--ATTATATTTGCTCACGGTATTGTAACATA-ATATGTTCTCTGG 357
consensus_15717#2      ATACGTTTGATGTAA--ATTATATTTGCTCACGGTATTGTAACATA-ATATGTTCTTTGG 267
consensus_15717#0      ATACGTCTGATGTAA--ATTATATTTGCTCACGGTATTGTAACATA-ATATGTTCTCTGG 1855
consensus_15717#3      ATGGTTCTGGTCTTATGATCACGTATGTT----GCCTTGAACCTTATGGATGGTCATGGT 267
                       **   * ** * * *  ** *  * ** *    *  *** * * **   *** **   * 

consensus_15717#1      AGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAA 417
consensus_15717#2      AGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAA 327
consensus_15717#0      AGGCAGAATCGCGACTCCACTGACTTGTAGTAACGTAGTACTACGTAGAAGTATTTGTAA 1915
consensus_15717#3      CAACCAGCTCTTCTTTACATTGTGCCTTTTACGCTTGGCACC-TTCATAGCGCTCGGCAG 326
                          *    **     * ** **     *     * * * **     * *    *  * * 

consensus_15717#1      CTAGGGCACTAGGCTTCACTGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCAT 477
consensus_15717#2      CTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCAT 387
consensus_15717#0      CTAGGGCACTAGGCTTCAATGCTGTTGTCCTAGTATGGAACTACGGATCCATGTTGTCAT 1975
consensus_15717#3      GAAACGGGGTGAACTCAAGAACCTCTGGACAAGAGGACAGCCTGAGAG--AGTCTGCACG 384
                         *  *   *   **  *   *   **  * **     * *    **   *   **    

consensus_15717#1      CACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAG 537
consensus_15717#2      CACTAGCAGGCATCA-TTTTTTGTATAGTAACCGGTTATA-AGTTTTGTGGCCACATAAG 445
consensus_15717#0      CACTAGCAGGCATCAATCTTTTGTATAGTAACCGGTTATATAGTTTTGTGGCCACATAAG 2035
consensus_15717#3      CACATGCACATGCAACCTTCACCGAAGGACACCAATTGTGA------------------- 425
                       ***  ***      *   *     *  *  ***  ** *                     

consensus_15717#1      AANCNGANGGAATTTTTAAGTGATTTTAAAAAAAAA 573
consensus_15717#2      AAA-TGAAGGAATT---------------------- 458
consensus_15717#0      AAA-TGAAGGAATTTTTAAGTGATTTTAGT------ 2064
consensus_15717#3      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)