These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1428 fasta sequence [TTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG-TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA-TTTCAG-GAACTCGGAGAGGCATACC-AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC-TTT-GGGATGC-TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT-CATAGCTGAGTGGGTCAGAGA-C-AAGGGCCACTGCATTAAA-TCACAGGTTAATGCCGC-TTCAGGCGC-TATCGCTCTGATGCAGCTAC-AAGAAGGGATG-AAAAAGATGGAGGAAAGTGACAAT-AAGGAGGACC-AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA-TGCTTAGTTACCTATGGAAAATTAAT-GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG-CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT-CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA--AGGA--AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA-TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT-AGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAAA] [+] EMBL AK071113 [TTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAA ] [+] EMBL CF314474 [ CTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAG ] [+] EMBL AU065786 [ GGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAG AGGTTGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTNCTCAGGATAACATGGTGGATCCTGCTGCTGTCTTTT GGGATGCTTTTTTGGAAGTTACTATTTT ] [+] EMBL OSS10218A [ GGATCGATTTTNTTNCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCANCGTGGACGGCTCCCCNGCCGAGATCAAGAAGGCCTATTANCTCAAGGCGAAGAGGG TGCATNCGGACAAGAATCCTGGGAACCCCGATNCGGCGCAGAAATTTTCAGNGAACTNGGAGGGGCATACCAAAGTT ] [+] EMBL CB618172 [ ATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCATGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAACTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACGGTCAAGAAGCAAGAGGGAAGGTTCAAGATAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTATTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCACA A C AACGGC ] [+] EMBL AK103912 [ CTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAA ] [+] EMBL CF323183 [ ACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCATAAA TGTCAA GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTG ] [+] EMBL C26296 [ CTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAG AGGTTGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTT ] [+] EMBL AU064660 [ TCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAA NAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGC ] [+] EMBL AU063803 [ TCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAG AGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGG TTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTTGGGGATGCTTTTTTGGAAGTGACTATTTTGAAGATTATGTTTGACAACTTTCACTTGCATCCATAGCATCAGTGGAAGTCGAGGGAAACTTTAACAGTCAAGAAGCAAG ] [+] EMBL CB624225 [ CTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGTCCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAACTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACGGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGACGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGTCTATATTTATGTGCGACAAGCAGCGAGAGAACTT ] [+] EMBL CB658803 [ CCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCATAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCT ] [+] EMBL CB677317 [ AACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGAAAGGATG AAAAAGATGGAGGAAAGTGAC ] [+] EMBL AU101062 [ TTGTATATGGGTGTCCCATTCCTTAGCTGATTGGNTCAGAGACC AAGGGCCACTGCATTAAATTCACAGNTTAATGCCGC TTCAGGNCC TATCGCTCTGATGCAGCTAC AAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAA ] [-] EMBL CB624226 [ GTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCCCTGCATTTAA TCACAGGTTTATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGGAGGGATG AAAAAGATGGAGGAAAGTGCCAAT AAGGGGGGCC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTCCGAGCAAGAGCATTGAAAAAGCTTGGGACAATATT CCAGGGTGGGAAGTCTCTGTCCCATCAAGAAACCTGCCTCCGGGTGGttccc ] [+] EMBL AU095749 [ gnTCAGAGA C ANGGGCCACTGCCTTTAA TCACAGGTTAATNCCGCTTTCAGGC C TATCGCTCTGATGCAGCTAC AAGAAGGGTTGAAAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAGCCNGTTTTGAAAGACGCCNGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATTCCCNGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTNACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAaaa ] [+] EMBL AU108251 [ tTCAGAGA CAAAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGG GCNTATCGCTCTGATGCAGCTNCAAAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC NGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAAA] [-] EMBL CA759342 [ agaggacGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTCC AAGAAGGGATG AAAAAGATGGAGGAAAGTGCCAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGGTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA GGGAAGAAAAAAAAAGTACACCTGACGGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCTTGTCCGTTTATTCA TTTTTGTGAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGT AAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAaaaaa ] [+] EMBL BM419217 [ AGTGACAATNAAGGAGGACCAAGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCACTGCTTAGTTACCTATGGAAAATTAATCGTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAAGGAAGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCTTGTCCGTTTATTCACCTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCNGCATATTACTCNCCTTGGGCTATCTCGTTGTAAGATTaaa ] [-] EMBL CF309931 [ CAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTAaaaaa ] [+] EMBL CF309932 [ CAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTAaaaa ] [+] EMBL AU094877 [ CAGCCNACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGNCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAGATTTGCAA ] [+] EMBL BI810052 [ GACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCTTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACCCGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAaaaaaaaa ] consensusID : consensus_15748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence [GGTTCGATTTTTTTTNNNCCCCAATTTNNTCCNGGCGCTCACCNCCNCCNCCCCCGGGATCTNCCAGAAGCTNCCAGAACNGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCNGCCATGGTGAAGGATACCGCGTACNACGACACCCNGGGGGTCAGCGTGGACGCCTCCCCNGNCGAGATCAAGAAGGCCTATNACCACAAGGCGAA] [+] EMBL OSS10693A [GGTTCGATTTTTTTTNNNCCCCAATTTNNTCCNGGCGCTCACCNCCNCCNCCCCCGGGATCTNCCAGAAGCTNCCAGAACNGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCNGCCATGGTGAAGGATACCGCGTACNACGACACCCNGGGGGTCAGCGTGGACGCCTCCCCNGNCGAGATCAAGAAGGCCTATNACCACAAGGCGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15748#0 TTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCT 60 consensus_15748#1 -------------GGTTCGATTTTTTTTNNNCCCCAATTTNNTCCNGGCGCTCACCNCCN 47 ** ************ ********* *** ** ******* ** consensus_15748#0 CCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGG 120 consensus_15748#1 CCNCCCCCGGGATCTNCCAGAAGCTNCCAGAACNGACCTTGGTGCGGGCGAGATCCAAGG 107 ** ************ ********* ******* ************************** consensus_15748#0 AGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGT 180 consensus_15748#1 AGGAGGGTTTCCNGCCATGGTGAAGGATACCGCGTACNACGACACCCNGGGGGTCAGCGT 167 ************ ************************ ********* ************ consensus_15748#0 GGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGGTGCATCC 240 consensus_15748#1 GGACGCCTCCCCNGNCGAGATCAAGAAGGCCTATNACCACAAGGCGAA------------ 215 ************ * ******************* *** ********* consensus_15748#0 GGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAATTTCAGGAACTCGGAGAGGCATA 300 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 CCAAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCT 360 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TCCTCAGGATAACATGGTGGATCCTGCTGCTGTCTTTGGGATGCTTTTTGGAAGTGACTA 420 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGA 480 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 AAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAA 540 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 AGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGA 600 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 GAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGC 660 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGA 720 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 ACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATTCATAGCTGAGTGGGTCAGAGACAA 780 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 GGGCCACTGCATTAAATCACAGGTTAATGCCGCTTCAGGCGCTATCGCTCTGATGCAGCT 840 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 ACAAGAAGGGATGAAAAAGATGGAGGAAAGTGACAATAAGGAGGACCAGATTATGAAGAG 900 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TTTCGAGGAGAAAAAAGATGCCATGCTTAGTTACCTATGGAAAATTAATGTGGTTGATAT 960 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TGAGTCAACACTTACACATGTTTGCCAAGCAGTTTTGAAAGACGCCAGTGTCCCAAAAGA 1020 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATTCCAGGGTGCGAA 1080 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 GTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGC 1140 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 AACATCGAACTGAAGACTGCAAAAGTACAAAAAGGAAAAAAAAAAGTACACCTGACAGAC 1200 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 GCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCATTTTTGTAAGAT 1260 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTT 1320 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 TGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAA 1380 consensus_15748#1 ------------------------------------------------------------ consensus_15748#0 CCTGCATATTACTAGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAAA 1428 consensus_15748#1 ------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||