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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15763#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1061 fasta sequence
[CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG-TGG-TGGACCCGTGGAGGATGATATGGC-GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG-CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA-ATT-GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC-GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA]
[+] EMBL AK060518 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAA ]
[+] EMBL AK105977 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAA ]
[+] EMBL AK099107 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCACGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGAT ]
[+] EMBL CB680185 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGT ]
[+] EMBL CB652054 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGAAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTC ]
[+] EMBL AU096195 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGANCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTGTTGGTTGGACCCGTGGAGGATGATATGGCNGAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACANGGATATCATTATGCATGTGAATTCTTCTGGAGGATCAGTGACAGNTTGGGATGGCCATAT ]
[+] EMBL AU174001 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGANCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGNGGAGGATGATATG ]
[+] EMBL AU182452 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGNTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTNGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGT ]
[+] EMBL OSS13485A [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGNCCCGAGATCTCTGCNGCTCCTCAGGACCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGn ]
[+] EMBL CF326580 [ GAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTG ]
[+] EMBL CF310263 [ CCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGTACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACGG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACATTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGC ]
[+] EMBL AU096196 [ CATATTCGACNCGATGAAGCATATCAGACNTGATGTTTCCCCAGTTTGTATTGGCCTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA]
[-] EMBL CF310264 [ CATTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCCAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTAaaaaa ]
[+] EMBL BE230011 [ GAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTG ATT GATGGAGTTATCATGAATCCCCTTAA ]
[+] EMBL BE230079 [ GAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTG ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAAT ]
[-] EMBL CB680186 [ GAAGCGATCCAGCTTACCTAACTCAAGAATAACGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACGTAGCATCCCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATAGTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCACCCGCTTCCTGCTTTTAGTTAGCCATGGAGTGTTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACAGTTTTTATTAGCTTGc ]
[+] EMBL CB679396 [ GAGCCCTAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAA ]
[+] EMBL AU174002 [ TGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA]
[+] EMBL AU182407 [ TGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA]
[+] EMBL AU182453 [ CATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGCTGATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA]
[-] EMBL AU225150 [ ccgctGTAGATACTGA CGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTAaaaagcggc ]
[+] EMBL AU096325 [ gtaATGGNCTACATTCGATGGAGTTNTAATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTNAGCCATGGAGNGCTCAATCTCCNCGGAGCATTTTTTGGTTATNTTTTNGNACTGTTATTGNATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCNCAAGCAACCACATCCTGAGGCTTCAAANTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGNTATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA]
[+] EMBL BE228246 [ ttgaa GATGGAGTTA CATG ANCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTNCTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTNCTATTAGGAGGATATCTTCTGCGATGAATATTGCAACT ]
consensusID : consensus_15763#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence
[TGATCTTGAGATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGACATCTCAATAGCAAATAATTAACCATATCATTGTTTCTCTCTTGCCGGTATATGGTTCGATCTACATGAAATACATTTATTTCCACAAGCGAATAGCAACTCCGCTGGCTTTCTATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCCATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTAAAGCCCTACAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTT]
[+] EMBL CA767584 [TGATCTTGAGATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGACATCTCAATAGCAAATAATTAACCATATCATTGTTTCTCTCTTGCCGGTATATGGTTCGATCTACATGAAATACATTTATTTCCACAAGCGAATAGCAACTCCGCTGGCTTTCTATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCCATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTAAAGCCCTACAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15763#0 CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCT 60
consensus_15763#1 ------------------------------------------------------------
consensus_15763#0 CAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGC 120
consensus_15763#1 ------------------------------------------------------------
consensus_15763#0 CGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCC 180
consensus_15763#1 ------------------------------------------------------------
consensus_15763#0 CTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGA 240
consensus_15763#1 ------------------------------------------------------------
consensus_15763#0 GCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTGTGGTGGACC 300
consensus_15763#1 ------------------------------------------------------------
consensus_15763#0 CGTGGAGGATGATATGGCGAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGA 360
consensus_15763#1 ---------------------------------------------------------TGA 3
**
consensus_15763#0 TCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAGCTGGGAT 420
consensus_15763#1 TCTTGA----GATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGAC 59
** * * *** ** * ** * * * * * * * ***
consensus_15763#0 GGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACT 480
consensus_15763#1 ATCTCAATAGCAAATAATTAACCATATCA----TTGTTTCTCTCTTGCCGGTATATGGTT 115
* ** * * ** ** ******* * * * ** * **** * *
consensus_15763#0 TGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTT 540
consensus_15763#1 CGATCTA--CATGAAA-----TACATTTATTTCC---ACAAGCGAATAGCAACTCCGCTG 165
* * * *** * * *** * * **** * *** * * ***
consensus_15763#0 ACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGG-ACAAGAGACTG 599
consensus_15763#1 GCTT---TC-----TATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCC 217
* * ** ** ** * * * * * * * ** * **
consensus_15763#0 ATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAG 659
consensus_15763#1 ATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAG 277
** * * ************************************************
consensus_15763#0 CATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCA 719
consensus_15763#1 CATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCA 337
************************************************************
consensus_15763#0 TGAGCGCGAAGGAGGCAAAGGAGTATGGTCTAATTGATGGAGTTATCATGAATCCCCTTA 779
consensus_15763#1 TGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTA 397
******************************* ****************************
consensus_15763#0 AAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCA 839
consensus_15763#1 AAGCCCTACAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCA 457
******* ****************************************************
consensus_15763#0 TTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGAT 899
consensus_15763#1 TTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGAT 517
************************************************************
consensus_15763#0 AGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATG 959
consensus_15763#1 AGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATG 577
************************************************************
consensus_15763#0 TACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATGTACTATTAGGA 1019
consensus_15763#1 TACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTT--------------- 622
*********************************************
consensus_15763#0 GGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA 1061
consensus_15763#1 ------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||