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Oryza sativa
cluster # 15768 cluster # 15768       Sequences # 24       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15768#0 length = 1302 sequences # 15  
consensus_15768#1 length = 1008 sequences # 5  
consensus_15768#2 length = 875 sequences # 3  
consensus_15768#3 length = 634 sequences # 1  

consensusID : consensus_15768#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1302
fasta sequence
                              [GCACTTCAT-CCCCCCTCCCCTCCCTCCCTCCGCCGGAGCGCCGTCTCAAAATGGCCGCCACCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC-GTGC-GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG-CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA-ACAGCTGAGGAGCAAGAACCCCCTCA-ACAATGCA-AGAGC-TA-CCA-TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA-ATGGAGCAGCTATGGA-AATAATC-AAAT-AAATCAACCTTAAATTCCCTC-CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT-TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATAAATGCGAGTTTATTATGTTTT-AAAC--CCCAAAAAAAAAAAAAA]

[+] EMBL AK060924             [GCACTTCAT CCCCCCTCCCCTCCCTCCCTCCGCCGGAGCGCCGTCTCAAAATGGCCGCCACCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC GTGC GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAA                                                                                                                           ]
[+] EMBL AK065820             [     TCATCCCCCCCTCCCCTCCCTCCCTCCGCCGGAGCGCCGTCTCAAAATGGCCGCCACCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC GTGC GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATAAATGCGAGTTTATTATGTTTT                        ]
[+] EMBL AK119178             [           CCCCCTCCCCTCCCTCCCTCCGCCGGAGCGCCGTCTCAAAATGGCCGCCACCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC GTGC GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATAAATGCGAGTTTA                                 ]
[+] EMBL CB672665             [                                    GAGCGCCGTCTCAAAATGGCCGCCACCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC GTGC GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTTGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATATAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB679536             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC GTGC GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGAATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCAT TGAAGGACACGTTCCGCACGTATAA                                            ]
[-] EMBL CB679565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCC GTGC GATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGAATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTAAGAGACACGTTCCGCACGTATAA                                            ]
[+] EMBL BI804865             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTTCCGGTGCGGATCGTCGTCGTCGGCGACATGAA GGCCAC TC GTGTGGGC TT GCAA GCCAAGGAGTTCACCGAGGCCATCACCAA GCCGCCATGAAC GCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGAT CAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGA GGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA AC ATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGC AAGCTTTAGATGAATTGATCTGCGAATAaaaaa                                                                                            ]
[-] EMBL CB964765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCNTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCTTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATG                                                                                                                                                  ]
[-] EMBL CB966612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCTTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATG                                                                                                                                                  ]
[+] EMBL BI805830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGTCGGTGTGGGCGTT GCAA GCCAAGGAGTTCACCGAGGCCATCACCAA GCCGCCATGAAACGCCGTCGCAATCTCGTCACCGTCCAGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGA CTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAATACA CTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACAT GC AAGCTTTAGATGAATTGATCTGCGAATAaaaa                                                                                             ]
[+] EMBL BQ907453             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGACCTTCCCGCATAGAGCAGATGCAGACTAT GA CAGCCAGGGTCATGTTGAGGCCTGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGA CTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCATACAATGCA AGAGCGTAGCCAGTCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCACATGGAGCAGCTATGGAGAATAATC AAAT AAATCAACCTTAAATTCCTTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATTGTTCAGTTGTATGTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATAAATTCGAGTTTATTATGTTTT    C  CCCAAAAAAAAAA    ]
[+] EMBL BQ908237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCANAGAGC TAGCCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCANATGGAGCAGCTATGGA AATAATCGAAATGAAATCAACCTTAAATTCCTTCNCAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATAAATTCGAGTTTATTAaaaaaa aaa                    ]
[+] EMBL AI978443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTTG CCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGNNAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCNNNNCTAGTAATA                                                                            ]
[-] EMBL AI978444             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         gtgcnnnnnATGGCTGGGGNNNNAAATGCTCTGGNNAA ACAGCTGAGGAGCAAGAACCCCCTCA NNAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCNNNCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTC                                                       ]
[+] EMBL CF325942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGGGTTGAAAATGCTCTGGGGAA ACAGCTGAGGAGCAAGAACCCCCTCA ACAATGCA AGAGC TA CCA TCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCA ATGGAGCAGCTATGGA AATAATC AAAT AAATCAACCTTAAATTCCCTC CAATATTTTTCTTTCTCCATTTCTTGAGTTCATT TTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATAAATGCGAGTTTATTATGTTTTCCCACTATGCAAAAAAAAAAAAAA]


>consensus_15768#0 GCACTTCATCCCCCCTCCCCTCCCTCCCTCCGCCGGAGCGCCGTCTCAAAATGGCCGCCA CCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGC CATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTC GCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGG AGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACG GGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCG CGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGC CCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGG TCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGC AGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCG TCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCC ACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCA TGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATA GAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTG GTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTC TGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGA CCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAGC TATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATTT CTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCC CCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATC TGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTATA AATGCGAGTTTATTATGTTTTAAACCCCAAAAAAAAAAAAAA



consensusID : consensus_15768#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1008
fasta sequence
                              [TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGNNNCAGTNCNNNNATGTTGCTGCAGNGCGNNNNNNNNNNATNNNNNAGCNNNNGAAAT]

[+] EMBL CB679535             [TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGC                                                                                                                                                                                                                                ]
[+] EMBL CB679564             [TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGTCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGC                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB000800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAAT                                                                                                                                     ]
[+] EMBL CF304671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTGCCGCATAGAGCATATGCAGACTATGGAGCACCCAGGGTCATGTTGAGGCC                                                                                                                                                                                                              ]
[+] EMBL CF196378             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGNNNCAGTNCNNNNATGTTGCTGCAGNGCGNNNNNNNNNNATNNNNNAGCNNNNGAAAT]


>consensus_15768#1 TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGC GAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTA GTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAG ATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATC GCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGT AGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGA GGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGT ACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCG AGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCA GCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTAT CCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCA AGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCG TCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAG CAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTG TGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCA AGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGNNNCAGTNCN NNNATGTTGCTGCAGNGCGNNNNNNNNNNATNNNNNAGCNNNNGAAAT



consensusID : consensus_15768#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 875
fasta sequence
                              [AGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCA--AAAAAAAAAGA]

[+] EMBL CA753903             [AGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGGAAATGCTCTGGGGAAACAGCTGAGGAGCAAGACCCCCCTCAACAATGGCAGAGCTACCCTC                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB672666             [                                                                                                                               GGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGG CCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTTGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCA  AAAAAAAAAGA]
[+] EMBL BI808935             [                                                                                                                                                                                                                                                                                                                                                                                                  CACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGACCAGAT CAGACTATGGA CAGCCAGGGTCATGTTGAGGCCTGCTTG CCTGGATCTGGTGTAATTGCAGGTGGA CTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAAC ATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCTTCCAATATTTTTCTTTCTCCATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGC AAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAAAAAAAAAa ]


>consensus_15768#2 AGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGG CCCCGTTCGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGA CGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGG AGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGG TCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGG GCCACGTCGGTGTGGGCGTTGGCAAGGCCCAAGGAGGTCACCGAGGCCATCACCAAGGCC GCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCG CATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGA TCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAAT GCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAG GCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAG CAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCC ATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCT CTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATT GATCTGCGAATACCTTTAGCTTCAAAAAAAAAAGA



consensusID : consensus_15768#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 634
fasta sequence
                              [ACCTTCCCGCATAGGGATGCCAAGCTCCTTGTCAGTGGCAGTGCAGAGTGGATTGGATTTGAGGAGAGCATGCAGAGGGGATTATATTGTGCATGGAGGTGAATATGGAAATGAAAATTCGAAGTTTGACACAGCCTTGAGAGCACATGCATACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCACAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCGTGTGCAAGACACGTTCCGCACGTATAAATGCGAGTTTATT]

[+] EMBL CB681254             [ACCTTCCCGCATAGGGATGCCAAGCTCCTTGTCAGTGGCAGTGCAGAGTGGATTGGATTTGAGGAGAGCATGCAGAGGGGATTATATTGTGCATGGAGGTGAATATGGAAATGAAAATTCGAAGTTTGACACAGCCTTGAGAGCACATGCATACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCACAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCGTGTGCAAGACACGTTCCGCACGTATAAATGCGAGTTTATT]


>consensus_15768#3 ACCTTCCCGCATAGGGATGCCAAGCTCCTTGTCAGTGGCAGTGCAGAGTGGATTGGATTT GAGGAGAGCATGCAGAGGGGATTATATTGTGCATGGAGGTGAATATGGAAATGAAAATTC GAAGTTTGACACAGCCTTGAGAGCACATGCATACTATGGAGCAGCCAGGGTCATGTTGAG GCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGAT GGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGC AAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCACAGCG CGGGCTTCCAATGGAGCAGCTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCA ATATTTTTCTTTCTCCATTTCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAAT CCTACATTTAAGTCCTCTCCCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCA AAGCTTTAGATGAATTGATCTGCGAATACCTTTAGCTTCACTAGTAATAGTGCGTGTGCA AGACACGTTCCGCACGTATAAATGCGAGTTTATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15768#0      GCACTTCATCCCCCCTCCCCTCCCTCCCTCCGCCGGAGCGCCGTCTCAAAATGGCCGCCA 60
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      ------------------------------------------------------------
consensus_15768#1      ---------------------TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAAC 39
                                                                                   

consensus_15768#0      CCTCCTCCACCGCCTCCGCCATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGC 120
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      ------------------------------------------------------------
consensus_15768#1      TAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTA 99
                                                                                   

consensus_15768#0      CATTCTCGTCTCTTCCTCTCCGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTC 180
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      ------------------------------------------------------------
consensus_15768#1      CGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTC 159
                                                                                   

consensus_15768#0      GCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGG 240
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      ------------------------------------------------------------
consensus_15768#1      CGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGA 219
                                                                                   

consensus_15768#0      AGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCCGCGGGGGAAGACGATGACG 300
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      ------------------------------------------------------------
consensus_15768#1      TTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCT 279
                                                                                   

consensus_15768#0      GGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCG 360
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      ---------------------------------------------------------AGC 3
consensus_15768#1      GCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGA 339
                                                                                   

consensus_15768#0      CGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGC 420
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      CGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCC 63
consensus_15768#1      ATTAGGGTTCGATTCCGGAGAGGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGC 399
                                                                                   

consensus_15768#0      CCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGG 480
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      CGTTCGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGG 123
consensus_15768#1      CCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGG 459
                                                                                   

consensus_15768#0      TCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGC 540
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      TCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGC 183
consensus_15768#1      TCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGC 519
                                                                                   

consensus_15768#0      AGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCG 600
consensus_15768#3      ------------------------------------------------------------
consensus_15768#2      AGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCG 243
consensus_15768#1      AGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCG 579
                                                                                   

consensus_15768#0      TCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCC 660
consensus_15768#3      --------------------------------ACCTTCCCGCATAGGGATGCCAAGCTCC 28
consensus_15768#2      TCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCC 303
consensus_15768#1      TCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCC 639
                                                       * * **       * **    ***  **

consensus_15768#0      ACGTCGGTGTGGGCGTTG-GCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCC 719
consensus_15768#3      TTGTCAGT---GGCAGTG-CAGAGTGGATTGGATTTGAGGAGAGCAT-GCAGAGGGGATT 83
consensus_15768#2      ACGTCGGTGTGGGCGTTGGCAAGGCCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCC 363
consensus_15768#1      ACGTCGGTGTGGGCGTTGGCAAGGCCAA-GGAGGTCACCGAGGCCATCACCAAGGCCGCC 698
                         *** **   ***  **     *   *  *   *    ***  ***  *  ***     

consensus_15768#0      ATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCAT 779
consensus_15768#3      AT-ATTGTGCATGGAGGT--GAATATGGAAATGAAAATTCGAAGTTTGACACAGCCTTG- 139
consensus_15768#2      ATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCAT 423
consensus_15768#1      ATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCAT 758
                       ** *  *  * * *   *      *  *    *   *       ** ***    **    

consensus_15768#0      AGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCT 839
consensus_15768#3      AGAGCACATGCATACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCT 199
consensus_15768#2      AGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCT 483
consensus_15768#1      AGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCT 818
                       ****** ***** ***********************************************

consensus_15768#0      GGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCT 899
consensus_15768#3      GGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCT 259
consensus_15768#2      GGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCT 543
consensus_15768#1      GGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCT 878
                       ************************************************************

consensus_15768#0      CTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCG 959
consensus_15768#3      CTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCG 319
consensus_15768#2      CTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCG 603
consensus_15768#1      CTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCG 938
                       ************************************************************

consensus_15768#0      ACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAG 1019
consensus_15768#3      ACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCACAGCGCGGGCTTCCAATGGAGCAG 379
consensus_15768#2      ACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAG 663
consensus_15768#1      ACCCAAATGATGNNNCAGTNCNNNNATGTTGCTGCAGNGCGNNNNNNNNNNATNNNNNAG 998
                       ************   **** *    ***********  ***          **     **

consensus_15768#0      CTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATT 1079
consensus_15768#3      CTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATT 439
consensus_15768#2      CTATGGAAATAATCAAATAAATCAACCTTAAATTCCCTCCAATATTTTTCTTTCTCCATT 723
consensus_15768#1      CNNNNGAAAT-------------------------------------------------- 1008
                       *    *****                                                  

consensus_15768#0      TCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTC 1139
consensus_15768#3      TCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTC 499
consensus_15768#2      TCTTGAGTTCATTTTCAGTTGTATCTGTCAGTGGGGATAATCCTACATTTAAGTCCTCTC 783
consensus_15768#1      ------------------------------------------------------------
                                                                                   

consensus_15768#0      CCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGAT 1199
consensus_15768#3      CCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGAT 559
consensus_15768#2      CCCACCCTAAATGCATTATGTGTCTCCACATATACATGGCAAAGCTTTAGATGAATTGAT 843
consensus_15768#1      ------------------------------------------------------------
                                                                                   

consensus_15768#0      CTGCGAATACCTTTAGCTTCACTAGTAATAGTGCATGTGCAAGACACGTTCCGCACGTAT 1259
consensus_15768#3      CTGCGAATACCTTTAGCTTCACTAGTAATAGTGCGTGTGCAAGACACGTTCCGCACGTAT 619
consensus_15768#2      CTGCGAATACCTTTAGCTTCAAAAAAAAAAGA---------------------------- 875
consensus_15768#1      ------------------------------------------------------------
                                                                                   

consensus_15768#0      AAATGCGAGTTTATTATGTTTTAAACCCCAAAAAAAAAAAAAA 1302
consensus_15768#3      AAATGCGAGTTTATT---------------------------- 634
consensus_15768#2      -------------------------------------------
consensus_15768#1      -------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)