cluster # 1580

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Oryza sativa
cluster # 1580 cluster # 1580 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1580#0 length = 687 sequences # 2

consensusID : consensus_1580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence

                              [TTGGGGAGGGGAAGGTAGTGATTGGCACAGATAACCTCTTAAAGCTCTCCACGGATGGGGTGACATGGTGCCCTGGCTCTGCTGGTTTTGATGCCCAAGGGAATTTAGCCTTCATGATCTGTGACCCCATGAAGTTGGCTTCCTCCCCCACCACAAGGTCATCTTCTACATCCTCATCTTCATCACATTCATCAAAGAAAGATCACCCAATGCAATTTGGTGTCCCCATATCTGTAGTTTGCGATTGGCTCTATCAGCACTGGCAGGGCAACTTGGATGAAGTTAGCAAGCCAAAGCTGCCCCTTGTTAGATTGATGTCCAGCAGAAGTGATCATTCAAGCACCTCCTTCACTCGTCGCCATGTGTTCAAGCCTGCAGATGATGAGAACGACGATACATCGGTTTCTTCACAAGTAACTTCGAAGCCTAAACATCAGCAGGCGTCAGGAAACTCGGCCAATGCAAGGATATCACATGATGCGAACCCTCTGGTTGATCTGCGTGCAAACAATGAGCAAGGGGTTTCTACTCCAGAGATATATGAATCACCCCGACAAAGTTCTTGCCAAGGCCAGAAAGATGCTGGTTCAGTTCAACTTCTGGATATCAACTTCCCACCTAGTGGCTCCCAAGACCATCTTTCTACCGCTGCCCCTGAAGCAAATGCTTCTGATGAGAACAACGCAG]

[+] EMBL CF304413             [TTGGGGAGGGGAAGGTAGTGATTGGCACAGATAACCTCTTAAAGCTCTCCACGGATGGGGTGACATGGTGCCCTGGCTCTGCTGGTTTTGATGCCCAAGGGAATTTAGCCTTCATGATCTGTGACCCCATGAAGTTGGCTTCCTCCCCCACCACAAGGTCATCTTCTACATCCTCATCTTCATCACATTCATCAAAGAAAGATCACCCAATGCAATTTGGTGTCCCCATATCTGTAGTTTGCGATTGGCTCTATCAGCACTGGCAGGGCAACTTGGATGAAGTTAGCAAGCCAAAGCTGCCCCTTGTTAGATTGATGTCCAGCAGAAGTGATCATTCAAGCACCTCCTTCACTCGTCGCCATGTGTTCAAGCCTGCAGATGATGAGAACGACGATACATCGGTTTCTTCACAAGTAACTTCGAAGCCTAAACATCAGCAGGCGTCAGGAAACTCGGCCAATGCAAGGATATCACATGATGCGAACCCTCTGGTTGATCTGCGTGCAAACAATGAGCAAGGGGTTTCTACTCCAGAGATATATGAA                                                                                                                                              ]
[+] EMBL C73008               [                                                                                                                                                                                                                                                  GATTGGCTCTATCAGCACTGGCAGGGCAACTTGGATGAAGTTAGCAAGCCAAAGCTGCCCCTTGTTAGATTGATGTCCAGCAGAAGTGATCATTCAAGCACCTCCTTCACTCGTCGCCATGTGTTCAAGCCTGCAGATGATGAGAACGACGATACATCGGTTTCTTCACAAGTAACTTCGAAGCCTAAACATCAGCAGGCGTCAGGAAACTCGGCCAATGCAAGGATATCACATGATGCGAACCCTCTGGTTGATCTGCGTGCAAACAATGAGCAAGGGGTTTCTACTCCAGAGATATATGAATCACCCCGACAAAGTTCTTGCCAAGGCCAGAAAGATGCTGGTTCAGTTCAACTTCTGGATATCAACTTCCCACCTAGTGGCTCCCAAGACCATCTTTCTACCGCTGCCCCTGAAGCAAATGCTTCTGATGAGAACAACGCAG]




>consensus_1580#0
TTGGGGAGGGGAAGGTAGTGATTGGCACAGATAACCTCTTAAAGCTCTCCACGGATGGGG
TGACATGGTGCCCTGGCTCTGCTGGTTTTGATGCCCAAGGGAATTTAGCCTTCATGATCT
GTGACCCCATGAAGTTGGCTTCCTCCCCCACCACAAGGTCATCTTCTACATCCTCATCTT
CATCACATTCATCAAAGAAAGATCACCCAATGCAATTTGGTGTCCCCATATCTGTAGTTT
GCGATTGGCTCTATCAGCACTGGCAGGGCAACTTGGATGAAGTTAGCAAGCCAAAGCTGC
CCCTTGTTAGATTGATGTCCAGCAGAAGTGATCATTCAAGCACCTCCTTCACTCGTCGCC
ATGTGTTCAAGCCTGCAGATGATGAGAACGACGATACATCGGTTTCTTCACAAGTAACTT
CGAAGCCTAAACATCAGCAGGCGTCAGGAAACTCGGCCAATGCAAGGATATCACATGATG
CGAACCCTCTGGTTGATCTGCGTGCAAACAATGAGCAAGGGGTTTCTACTCCAGAGATAT
ATGAATCACCCCGACAAAGTTCTTGCCAAGGCCAGAAAGATGCTGGTTCAGTTCAACTTC
TGGATATCAACTTCCCACCTAGTGGCTCCCAAGACCATCTTTCTACCGCTGCCCCTGAAG
CAAATGCTTCTGATGAGAACAACGCAG

clustalw multiple alignements is not computed in this case