These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1027 fasta sequence [TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT-GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC-GGGACTTACT-CCTGGACTTCACGG-CTTCCACCTCCACGAG-TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA-CATTTTAACCCAAACAA-TTTGACG-CACGGTGCA-CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG-AAACATTGTTG-CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA-AG-CAGATTCCTCTGAGTGGCCC-AAATTCTG-TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG-AAGATGATTTGGGGAAGGG-TGGCCATGAGCTTAGTCTCAGTACTGGAAATG-CTGGTGGGCGACTTGCATG-CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA-AGTTGCAG-CTGAAGTGTCAGTATCGCATCCATGT-CACCCTTTTTGTCATCTTCGAGCCTGA-GGCAGTCGTTCTTGTATCACAT-GGATTTCGCAACAT-GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT-AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAAAAAAAAAA] [+] EMBL AK059841 [TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAA ] [+] EMBL AK104240 [TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCATCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTG ] [+] EMBL AK068627 [ CAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTAAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAAT ] [+] EMBL AK104013 [ TCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTG ] [+] EMBL BE041119 [ ACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCAACCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGGGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTTCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGNG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGNTGTTCATGAGCTTG AAGATGATTTGGGGAAAGG TTGGCATGAACTTAGTCTCAATACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTG ] [+] EMBL OSC995 [ CCAACCCTCTGCCTCCCTTCCNCCNCCCTCCNCCNCCGCATNCAAGCCATCCTCGCCGCTGCCATNGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGNCGCCGG CCCGCGG GCCGCCGCTNGCCAGGGCGCTCGTCGTCGCCGAGNNCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTNCCAGGTTGAGGGAGTCGTCACCNTCACCCAGGATGACCAAGGTNCTACAACAGTGAATGTCCGTGTGACGGGGACTTACT ] [+] EMBL OSD239 [ ACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATG ] [+] EMBL CA758851 [ TGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGGCATGAGCTTAGT ] [+] EMBL CB680357 [ CGCATCCTAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGGCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCATAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGAGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGACGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCACTCGTTCTTGTATCACAT GGATTTCGCAACAT G ] [-] EMBL CB680358 [ tTTCCTCTGCCCGCCCTTTCCACTCGTTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAAGTATAAATGGTGAAACATGAGCTGTTC ] [+] EMBL AU097411 [ CCGTGTGACGGGGACTTACTCCCTGGACTTCACGGNTTTCCACCTCCACGAGTTTTGGCGATACTACGAATGGGTGCATATCAACAGGACCACCATTTTAACCCAAACAATTTTGACGCCACGGTGCACCCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGGNAANCATTGTTGCCCAATGCTGAAGTTGTAGCTGAGGCACCCATTGTTGATA AGCCAGATTCCTCTGAGTGGCCCAAAATTCTG TTGTTGGGAGANCATCCG TGTCCATGAGCTTGAAAGATGA TTGGGGAAGGGTTGCCCATGAGCTTAGTCTCAGTCCTGGAAATG CTGNTGGCCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCNTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCNTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCATAAAAAAAAACCATGTGTTATACAAAAa ] [+] EMBL CF328868 [ CCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTAGTGGGCGACTTG ATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGTNCACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAAC TGAGCTGTTCTGGGTATACAACGCAT AAAAA ] [+] EMBL BI804897 [ CG CACGGTGCACCCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTGCCCAATGCTGAAGGTGTAGCTGAGGCAACCCTTGTTGATA A CAGATTCCTCTGAGTGGCCC CAATTCTG TTGTTGGGAGAGCCTTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGCCCCTGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCAT CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCACAGTTGCAGCCTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCCGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCCAAAAAaaaaa ] [-] EMBL CF328867 [ ACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTAGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAA ] [+] EMBL BM419495 [ atTGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGA GCAACCATTGTTGATATAG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATAC ACGCAT AAAAAAAACCATGTGTTATACATAACA CCTTGTTGCTGGCTGTACTTTCGTGCTTCaaaaaa ] [+] EMBL BI795714 [ ATGCTGAAGGTGTA CTGAGCCAACCATTGTTGATA A CAGATTCCTCTGAGTGGCCC AAATTCTGTTTTTTGGGAGA CATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG T GCCATGAGCTTAGTCTCAGTACTGGAAATGTCTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTC AACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAAAAAAAA ] [+] EMBL AA752434 [ gagTCTGAGT GCCC AA TCTG TTGTYSGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGSCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGA CCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT SGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGC AATAAGTGTCGTCACAT CCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTG ] [+] EMBL AA751739 [ CTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACATGGGATTTCGCAACATGGGATGCTTAATAGTATCTGTTGATCGT ] [+] EMBL AA749607 [ TCTG TTGTTGGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTNNGCTGACCCCGTTGTAGGNNNCTGCA AGTT NNGAAGTNTCAGTATCGCATCCATGT CACCCTTTT ] [+] EMBL BM419230 [ TTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATGNCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGC ACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAAAAAAAAAA] [+] EMBL CF336722 [ GAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTAT ACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATGAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCAAAAAAAAAAAAAAA ] [+] EMBL AA751501 [ TCG GCACGAGGGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTT ] consensusID : consensus_15803#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence [GAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCAAGTTGCAGCTAAAGTGTCAGTATCGCATCCATGTCNCCCTTTTTGTCATCTTCGAGCCTGAGGCAGTCGTTNTTGTATCNCATGGATTTCGCAACATGGATGCTTAATAGTATCTGTTGATCGTTCGTCTCCCAGTAATAAAATTTAGTTGAGCAAATAAGNGTCGTCNCATCCCCTGTTNTCCNCCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTNTGGGNATACAACCGCATAAAAAAAACCATGTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU172732 [GAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCAAGTTGCAGCTAAAGTGTCAGTATCGCATCCATGTCNCCCTTTTTGTCATCTTCGAGCCTGAGGCAGTCGTTNTTGTATCNCATGGATTTCGCAACATGGATGCTTAATAGTATCTGTTGATCGTTCGTCTCCCAGTAATAAAATTTAGTTGAGCAAATAAGNGTCGTCNCATCCCCTGTTNTCCNCCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTNTGGGNATACAACCGCATAAAAAAAACCATGTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15803#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 170 fasta sequence [AAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCATAAAAAAAAACCATGTGTTATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF299400 [AAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCATAAAAAAAAACCATGTGTTATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15803#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 123 fasta sequence [ACCCTCTNCCTCCCTTCCGCCGTCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTNCCATGACCGCANAGACNTAGTTGTTCTCCGTCACCGACTCTCNATGCCTCTCANATTCNACATAC] [+] EMBL AU197432 [ACCCTCTNCCTCCCTTCCGCCGTCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTNCCATGACCGCANAGACNTAGTTGTTCTCCGTCACCGACTCTCNATGCCTCTCANATTCNACATAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15803#0 ------------------------------------------------------------ consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 GAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTG 60 consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 ------------------------------------------------------------ consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 CAAGTTGCAGCTAAAGTGTCAGTATCGCATCCATGTCNCCCTTTTTGTCATCTTCGAGCC 120 consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 ------------------------------------------------------------ consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 TGAGGCAGTCGTTNTTGTATCNCATGGATTTCGCAACATGGATGCTTAATAGTATCTGTT 180 consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 -------------TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTC 47 consensus_15803#3 ------------------------------------------------ACCCTCTNCCTC 12 consensus_15803#1 GATCGTTCGTCTCCCAGTAATAAAATTTAGTTGAGCAAATAAGNGTCGTCNCATCCCCTG 240 consensus_15803#2 ----------------------------------------AAGTGTCGTCACATCCCCTG 20 * * *** consensus_15803#0 CCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCAT---CCTCGCCGCTGCCATGGCCGCC 104 consensus_15803#3 CCTTCCGCCGTCCTCCGCCGCCGCATGCAAGCCAT---CCTCGCCGCTNCCATGACCGCA 69 consensus_15803#1 TTNTCCNCCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTNTGGGNATACAACCGCA 300 consensus_15803#2 TTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAAC-GCA 79 *** ** * ** * *** * * * * ** consensus_15803#0 CAGACCCTCTTGTTCTCCGCCACCGCCCCTCC-CGCCTCCCTTTTCCAGTCCCCTTCCTC 163 consensus_15803#3 NAGACNTAGTTGTTCTCCGTCACCGACTCTCNATGCCTCTCANATTCNACATAC------ 123 consensus_15803#1 TAAAAAAAA---CCATGTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------- 348 consensus_15803#2 TAAAAAAAAA--CCATGTGTTATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 137 * * * * * consensus_15803#0 TGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCTGCCAG 223 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 AAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA--------------------------- 170 consensus_15803#0 GGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCA 283 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 GGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCG 343 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 TGTGACGGGACTTACTCCTGGACTTCACGGCTTCCACCTCCACGAGTTTGGCGATACTAC 403 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 GAATGGGTGCATATCAACAGGACCACATTTTAACCCAAACAATTTGACGCACGGTGCACC 463 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 AGAAGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATTGTTGCCAATGCTGAAGGTGT 523 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 AGCTGAGGCAACCATTGTTGATAAGCAGATTCCTCTGAGTGGCCCAAATTCTGTTGTTGG 583 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 GAGAGCATTCGTTGTTCATGAGCTTGAAGATGATTTGGGGAAGGGTGGCCATGAGCTTAG 643 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 TCTCAGTACTGGAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTT 703 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 GTAGGTCGCTGCAAGTTGCAGCTGAAGTGTCAGTATCGCATCCATGTCACCCTTTTTGTC 763 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 ATCTTCGAGCCTGAGGCAGTCGTTCTTGTATCACATGGATTTCGCAACATGGATGCTTAA 823 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 TAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGT 883 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 CACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGT 943 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 ATACAACGCATAAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTT 1003 consensus_15803#3 ------------------------------------------------------------ consensus_15803#1 ------------------------------------------------------------ consensus_15803#2 ------------------------------------------------------------ consensus_15803#0 CGTGCTTCTGATCTAAAAAAAAAA 1027 consensus_15803#3 ------------------------ consensus_15803#1 ------------------------ consensus_15803#2 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||